Jatropha Genome Database

Jcr4U29440.10
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4U29440.10 /partial
         (113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g03190.1                                                       201   2e-52
Glyma15g07470.1                                                       139   6e-34
Glyma14g12200.1                                                       112   9e-26
Glyma08g47460.1                                                        72   1e-13
Glyma01g00410.1                                                        71   3e-13

>Glyma07g03190.1 
          Length = 126

 Score =  201 bits (510), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 98/113 (86%), Positives = 105/113 (92%)

Query: 1   FVILSGYSILSNEELIILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGS 60
           F ILSGYSIL N+EL+++NS VQEF+YNLSDTIKAFSILLLTDLCIGFHS HGWEL+IG 
Sbjct: 14  FFILSGYSILGNQELVLINSLVQEFIYNLSDTIKAFSILLLTDLCIGFHSTHGWELVIGF 73

Query: 61  VYKDFGFAHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 113
           VYKDFGFA NDQIISGLVSTFPVILDTI KY IFRYLNR+SPSLVVIYHSMND
Sbjct: 74  VYKDFGFAQNDQIISGLVSTFPVILDTILKYLIFRYLNRISPSLVVIYHSMND 126


>Glyma15g07470.1 
          Length = 125

 Score =  139 bits (351), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 75/109 (68%), Positives = 82/109 (75%), Gaps = 19/109 (17%)

Query: 5   SGYSILSNEELIILNSWVQEFLYNLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKD 64
           +GYSIL N+EL+++NS V+EF+YNLSDTIKAFSILLLTDL                    
Sbjct: 36  NGYSILGNQELVLINSLVREFIYNLSDTIKAFSILLLTDLY------------------- 76

Query: 65  FGFAHNDQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVVIYHSMND 113
           FGFA NDQIISGLV  FPVILDTI KY IFRYLNRVSPSLVVIYHSMND
Sbjct: 77  FGFAQNDQIISGLVFIFPVILDTILKYLIFRYLNRVSPSLVVIYHSMND 125


>Glyma14g12200.1 
          Length = 210

 Score =  112 bits (280), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 60/84 (71%), Positives = 62/84 (73%), Gaps = 11/84 (13%)

Query: 30  SDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDFGFAHNDQIISGLVSTFPVILDTIF 89
            +T+K FSILLLTDLCIGFHS H           DFGFA NDQII GLVST PVILDTI 
Sbjct: 138 CETVKFFSILLLTDLCIGFHSTH-----------DFGFAQNDQIIFGLVSTSPVILDTIL 186

Query: 90  KYWIFRYLNRVSPSLVVIYHSMND 113
           KY IF YLNR SPSLVVIY SMND
Sbjct: 187 KYLIFHYLNRASPSLVVIYPSMND 210


>Glyma08g47460.1 
          Length = 433

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 54/85 (63%)

Query: 28  NLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDFGFAHNDQIISGLVSTFPVILDT 87
           N+SDT KAF I+L+TD+ +G+HS  GW+ ++  + + +G   +   I+  +   PV++D 
Sbjct: 347 NISDTGKAFLIILITDIFLGYHSESGWQTLLEIIVEHYGLEVDQSAITIFICLVPVVIDA 406

Query: 88  IFKYWIFRYLNRVSPSLVVIYHSMN 112
             K W+F++L R+SPS+  I+  M 
Sbjct: 407 CVKLWLFKFLPRLSPSVTNIFQEMK 431


>Glyma01g00410.1 
          Length = 433

 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 53/85 (62%)

Query: 28  NLSDTIKAFSILLLTDLCIGFHSPHGWELMIGSVYKDFGFAHNDQIISGLVSTFPVILDT 87
           N+SDT KAF I+L+TD+ +G+HS  GW+ ++  + + +G   +   I+  +   PV++D 
Sbjct: 347 NISDTGKAFLIILITDIFLGYHSESGWQTLLEIIVEHYGLEVDQSAITIFICLIPVVIDA 406

Query: 88  IFKYWIFRYLNRVSPSLVVIYHSMN 112
             K W+F++L R+SP +  I+  M 
Sbjct: 407 CVKLWLFKFLPRLSPRVTNIFREMK 431