Jatropha Genome Database

Jcr4U29393.10
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4U29393.10
         (251 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01007521001 assembled CDS                                       430   e-121
GSVIVT01010328001 assembled CDS                                       415   e-116
GSVIVT01001842001 assembled CDS                                       400   e-112
GSVIVT01036751001 assembled CDS                                       367   e-102
GSVIVT01013403001 assembled CDS                                       199   1e-51
GSVIVT01001128001 assembled CDS                                       155   2e-38
GSVIVT01032942001 assembled CDS                                       112   2e-25
GSVIVT01037165001 assembled CDS                                        94   9e-20
GSVIVT01037170001 assembled CDS                                        91   5e-19
GSVIVT01037176001 assembled CDS                                        82   3e-16

>GSVIVT01007521001 assembled CDS
          Length = 343

 Score =  430 bits (1106), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/240 (87%), Positives = 222/240 (92%)

Query: 1   PEEIPWGQTGAEFVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNENEYK 60
           PEEIPWG+TGAEFVVESTGVFTD              VVISAPSKDAPMFVVGVNE EYK
Sbjct: 90  PEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYK 149

Query: 61  PELDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRA 120
           PEL IVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRA
Sbjct: 150 PELHIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRA 209

Query: 121 ASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKAATYEQIKAA 180
           ASFNIIPSSTGAAKAVGKVLP+LNGKLTGMAFRVPTVDVSVVDLTVRLEKAATYEQ+KAA
Sbjct: 210 ASFNIIPSSTGAAKAVGKVLPSLNGKLTGMAFRVPTVDVSVVDLTVRLEKAATYEQVKAA 269

Query: 181 IKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWYDNEVGYS 240
           IKEESEGK+KGILGY E+D+VS+DFIGDNRSSIFDAKAGIALN+KF+K+V+WYDNE GYS
Sbjct: 270 IKEESEGKMKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIALNEKFLKIVAWYDNEWGYS 329


>GSVIVT01010328001 assembled CDS
          Length = 380

 Score =  415 bits (1066), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/240 (83%), Positives = 219/240 (91%)

Query: 1   PEEIPWGQTGAEFVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNENEYK 60
           PEEIPW +TGA++VVESTGVFTD              V+ISAPSKDAPMFV+GVNE EYK
Sbjct: 128 PEEIPWAETGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVMGVNEKEYK 187

Query: 61  PELDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRA 120
           P++DIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVH+ITATQKTVDGPS KDWRGGRA
Sbjct: 188 PDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGRA 247

Query: 121 ASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKAATYEQIKAA 180
           ASFNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPTVDVSVVDLTVRLEK+ATY+++KAA
Sbjct: 248 ASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKSATYDEVKAA 307

Query: 181 IKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWYDNEVGYS 240
           IKEESEGKLKGILGY E+D+VS+DFIGD+RSSIFDAKAGIALN  F+KLVSWYDNE GYS
Sbjct: 308 IKEESEGKLKGILGYTEDDVVSTDFIGDSRSSIFDAKAGIALNANFLKLVSWYDNEWGYS 367


>GSVIVT01001842001 assembled CDS
          Length = 337

 Score =  400 bits (1028), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/240 (81%), Positives = 212/240 (88%)

Query: 1   PEEIPWGQTGAEFVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNENEYK 60
           PEEIPWG+ GAE+VVESTGVFTD              V+ISAPS +APMFV+GVNE EYK
Sbjct: 84  PEEIPWGEAGAEYVVESTGVFTDKDKAALHLKGGAKKVIISAPSSNAPMFVMGVNEKEYK 143

Query: 61  PELDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRA 120
             +DIVSNASCTTNCLAPLAKVI+D+FGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRA
Sbjct: 144 SNIDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRA 203

Query: 121 ASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKAATYEQIKAA 180
           ASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPT DVSVVDLTVR EK A+Y+ IKAA
Sbjct: 204 ASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTADVSVVDLTVRTEKKASYDDIKAA 263

Query: 181 IKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWYDNEVGYS 240
           IK ESEG LKGILGY E+++VSSDF+GD+RSSIFDAKAGIALN+ F+KLVSWYDNE GYS
Sbjct: 264 IKAESEGNLKGILGYTEDEVVSSDFLGDSRSSIFDAKAGIALNENFIKLVSWYDNEWGYS 323


>GSVIVT01036751001 assembled CDS
          Length = 429

 Score =  367 bits (943), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 179/240 (74%), Positives = 201/240 (83%)

Query: 1   PEEIPWGQTGAEFVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNENEYK 60
           P EIPWG  G ++VVES+GVFT               VVISAPS DAPMFVVGVNE  YK
Sbjct: 173 PSEIPWGDYGIDYVVESSGVFTTTEKASAHIKGGAKKVVISAPSADAPMFVVGVNETSYK 232

Query: 61  PELDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRA 120
           P ++IVSNASCTTNCLAPLAKV+++ FGIVEGLMTTVH+ TATQKTVDGPSMKDWRGGR 
Sbjct: 233 PSMNIVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRG 292

Query: 121 ASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKAATYEQIKAA 180
           AS NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +VSVVDLT RL+K+ATYE +KAA
Sbjct: 293 ASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLKKSATYEDVKAA 352

Query: 181 IKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWYDNEVGYS 240
           +K  SEG LKGILGY +ED+VS+DF+GD+RSSIFDAKAGI L+  F+KLV+WYDNE GYS
Sbjct: 353 VKYASEGPLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVAWYDNEWGYS 412


>GSVIVT01013403001 assembled CDS
          Length = 453

 Score =  199 bits (506), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/244 (50%), Positives = 160/244 (65%), Gaps = 5/244 (2%)

Query: 1   PEEIPWGQTGAEFVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK--DAPMFVVGVNENE 58
           P ++PW + G + V+E TGVF D              V+I+AP+K  D P +VVGVNE +
Sbjct: 167 PLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEGD 226

Query: 59  YKPEL-DIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRG 117
           Y  E+ +IVSNASCTTNCLAP  K++++  GIV+G MTT HS T  Q+ +D  S +D R 
Sbjct: 227 YSHEVSNIVSNASCTTNCLAPFVKILDEELGIVKGTMTTTHSYTGDQRLLDA-SHRDLRR 285

Query: 118 GRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKAA-TYEQ 176
            RAA+ NI+P+STGAAKAV  VLP L GKL G+A RVPT +VSVVDL V +EK   T E 
Sbjct: 286 ARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAED 345

Query: 177 IKAAIKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWYDNE 236
           + AA ++ ++G LKGIL   +  LVS DF   + SS  DA   + + D  VK+V+WYDNE
Sbjct: 346 VNAAFRKAADGPLKGILAVCDVPLVSVDFKCSDVSSTIDASLTMVMGDDMVKVVAWYDNE 405

Query: 237 VGYS 240
            GYS
Sbjct: 406 WGYS 409


>GSVIVT01001128001 assembled CDS
          Length = 331

 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/217 (46%), Positives = 130/217 (59%), Gaps = 3/217 (1%)

Query: 20  VFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNENEYKPELDIVSNASCTTNCLAP 78
           VF D              V+I+AP K D P +VVGVN   Y P   I+SNASCTTNCLAP
Sbjct: 109 VFVDREGAGKHIEAGAKKVLITAPGKADIPTYVVGVNAETYNPAEPIISNASCTTNCLAP 168

Query: 79  LAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGK 138
             K+++ +FGI++G MTT HS T  Q+  D  S +  R  RAA  NI+P+STGAAKAV  
Sbjct: 169 FVKILDQKFGIIKGTMTTTHSYTGDQRLFDA-SHRVLRPVRAAVLNIVPTSTGAAKAVAL 227

Query: 139 VLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKAATY-EQIKAAIKEESEGKLKGILGYVE 197
           VLP L GKL G+A RVPT +VSVVDL V +    T+ E++ AA +  +E +L GI    +
Sbjct: 228 VLPNLKGKLNGIALRVPTSNVSVVDLVVLVNDGETFAEEVNAAFRNSAEKELNGIPSMCD 287

Query: 198 EDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWYD 234
           E LVS DF   + SS  D+   + + D  VK+V   D
Sbjct: 288 EPLVSVDFRCSDVSSTVDSSLTMVMGDDMVKVVDLAD 324


>GSVIVT01032942001 assembled CDS
          Length = 289

 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 52/109 (47%), Positives = 69/109 (63%), Gaps = 1/109 (0%)

Query: 1   PEEIPWGQTGAEFVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNENEY 59
           P ++PWG    + V+E TGVF D              V+I+AP K D P +VVGVN +EY
Sbjct: 150 PLDLPWGDLDIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADEY 209

Query: 60  KPELDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVD 108
             +  I+SNASCTTNCLAP  KV++ +FGI++G MTT HS T  Q+ +D
Sbjct: 210 NHDESIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLD 258


>GSVIVT01037165001 assembled CDS
          Length = 180

 Score = 93.6 bits (231), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 45/62 (72%), Positives = 51/62 (82%)

Query: 179 AAIKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWYDNEVG 238
           A+ + E EG LK ILGY ++D+VSSDFIGD RSSIF AKAGIALND F+KLVSWYDNE  
Sbjct: 28  ASYRAEYEGNLKEILGYTKDDVVSSDFIGDRRSSIFYAKAGIALNDNFIKLVSWYDNEWV 87

Query: 239 YS 240
           YS
Sbjct: 88  YS 89


>GSVIVT01037170001 assembled CDS
          Length = 208

 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 48/57 (84%)

Query: 184 ESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWYDNEVGYS 240
           E EG LK ILGY ++D+VSSDFIGD RSSIF AKAGIALND F+KLVSWYDNE  YS
Sbjct: 61  EYEGNLKEILGYTKDDVVSSDFIGDRRSSIFYAKAGIALNDNFIKLVSWYDNEWVYS 117


>GSVIVT01037176001 assembled CDS
          Length = 166

 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/53 (71%), Positives = 45/53 (84%)

Query: 181 IKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWY 233
           ++ E EG LK ILGY ++D+VSSDF+GD RSSIF AKAGIALND F+KLVSWY
Sbjct: 58  LEAEYEGNLKEILGYTKDDVVSSDFVGDCRSSIFYAKAGIALNDNFIKLVSWY 110