Jatropha Genome Database
- Jcr4U29393.10
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jcr4U29393.10
(758 letters)
Database: JAT_unigene
122,497 sequences; 49,272,789 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
contig10939 length=1312 numreads=234 gene=isogroup05848 stat... 963 0.0
contig10540 length=1412 numreads=443 gene=isogroup05449 stat... 926 0.0
contig11602 length=1194 numreads=22 gene=isogroup06511 statu... 371 e-102
seed_E0K9Y9A01EA65Y 115 6e-25
seed_E0K9Y9A01BA801 64 2e-09
seed_E0K9Y9A01AJLO5 52 8e-06
>contig10939 length=1312 numreads=234 gene=isogroup05848
status=isotig
Length = 1312
Score = 963 bits (486), Expect = 0.0
Identities = 651/706 (92%)
Strand = Plus / Plus
Query: 1 acccagaggagattccatggggtcaaactggtgctgagtttgttgttgaatctactggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 acccagaggagattccatggggtcaaactggtgctgagtttgttgttgaatctactggtg 406
Query: 61 ttttcactgacaaggaaaaggctgcagctcacttgaagggtggtgctaagaaggttgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttttcactgacaaggaaaaggctgcagctcacttgaagggtggtgctaagaaggttgtta 466
Query: 121 tctctgctcctagcaaagatgcacctatgtttgttgtgggtgttaatgagaatgaatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tctctgctcctagcaaagatgcacctatgtttgttgtgggtgttaatgagaatgaatata 526
Query: 181 agccagagcttgacattgtttccaatgctagctgcactactaactgtcttgcccccttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 agccagagcttgacattgtttccaatgctagctgcactactaactgtcttgcccccttgg 586
Query: 241 ccaaggttataaatgataggtttgggattgttgagggtctaatgaccactgttcactcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ccaaggttataaatgataggtttgggattgttgagggtctaatgaccactgttcactcca 646
Query: 301 tcaccgccactcagaagactgttgatgggccatcaatgaaggactggagaggtggaagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tcaccgccactcagaagactgttgatgggccatcaatgaaggactggagaggtggaagag 706
Query: 361 ctgcctccttcaacatcattcctagcagcactggagctgctaaggctgttgggaaggtgc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 707 ctgcctccttcaacatcattcctagcagcactggagctgctaaggctgttggaaaggttc 766
Query: 421 tacctgctctgaacggcaagcttactggaatggctttccgtgttccaactgttgatgtct 480
| ||||| || || ||||| | ||||||||| | ||||||||||||||||| ||||| |
Sbjct: 767 ttcctgcacttaatggcaaattgactggaatgtcattccgtgttccaactgtggatgttt 826
Query: 481 ctgtggttgatctcactgttaggctagagaaggctgctacatatgaacaaattaaagctg 540
|||| ||||| || ||||| ||||| || ||| || |||||||| | || |||||||
Sbjct: 827 ctgttgttgaccttactgtcaggcttgaaaagaaggcaacatatgaggacatcaaagctg 886
Query: 541 ctatcaaagaggagtctgagggaaagctgaagggaatattgggctatgtcgaggaagatc 600
| ||||| |||||||||||||| ||||| |||||||| ||||||||| || || |||
Sbjct: 887 caatcaaggaggagtctgagggcaagcttaagggaatcttgggctatactgaagatgatg 946
Query: 601 tggtttcctctgacttcattggtgacaacaggtcaagtatttttgatgccaaagctggaa 660
| || || |||||||| | || || | ||| |||||||||||||||||||| || ||||
Sbjct: 947 tagtgtcttctgactttgtgggcgatagcagatcaagtatttttgatgccaaggcaggaa 1006
Query: 661 ttgctttgaatgataagtttgtgaagcttgtttcttggtacgacaa 706
||||||||||||| || |||||||| ||||| |||||||| |||||
Sbjct: 1007 ttgctttgaatgacaactttgtgaaacttgtctcttggtatgacaa 1052
>contig10540 length=1412 numreads=443 gene=isogroup05449
status=isotig
Length = 1412
Score = 926 bits (467), Expect = 0.0
Identities = 638/695 (91%)
Strand = Plus / Minus
Query: 27 actggtgctgagtttgttgttgaatctactggtgttttcactgacaaggaaaaggctgca 86
||||| ||||||| | |||| ||||| ||||| || |||||||||||||| ||||||||
Sbjct: 1048 actggagctgagtatattgtggaatcaactggagtgttcactgacaaggataaggctgct 989
Query: 87 gctcacttgaagggtggtgctaagaaggttgttatctctgctcctagcaaagatgcacct 146
||||| |||||||||||||||||||| || | ||||| || || ||||| ||||| ||
Sbjct: 988 gctcatttgaagggtggtgctaagaaagtcatcatctcagccccaagcaaggatgctccc 929
Query: 147 atgtttgttgtgggtgttaatgagaatgaatataagccagagcttgacattgtttccaat 206
||||||||||| ||||| |||||| | || || |||||||| || ||||||| || |||
Sbjct: 928 atgtttgttgttggtgtcaatgagcacgactacaagccagatattcacattgtatcaaat 869
Query: 207 gctagctgcactactaactgtcttgcccccttggccaaggttataaatgataggtttggg 266
|| |||||||| |||||||| ||||| || | || |||||||| |||||| | || ||
Sbjct: 868 gccagctgcaccactaactgccttgctcctcttgcaaaggttatcaatgatcgcttcggc 809
Query: 267 attgttgagggtctaatgaccactgttcactccatcaccgccactcagaagactgttgat 326
|||||||||||||| ||||| ||||| |||||||| || || || || ||||||||||||
Sbjct: 808 attgttgagggtcttatgacaactgtccactccattactgctacccaaaagactgttgat 749
Query: 327 gggccatcaatgaaggactggagaggtggaagagctgcctccttcaacatcattcctagc 386
|||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 748 gggccatcaagcaaggattggagaggtggaagagctgcttccttcaacatcattcctagc 689
Query: 387 agcactggagctgctaaggctgttgggaaggtgctacctgctctgaacggcaagcttact 446
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 agcacaggagctgctaaggctgttgggaaggtgctacctgctctgaacggcaagcttact 629
Query: 447 ggaatggctttccgtgttccaactgttgatgtctctgtggttgatctcactgttaggcta 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ggaatggctttccgtgttccaactgttgatgtctctgtggttgatctcactgttaggcta 569
Query: 507 gagaaggctgctacatatgaacaaattaaagctgctatcaaagaggagtctgagggaaag 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gagaaggctgctacatatgaacaaattaaagctgctatcaaagaggagtctgagggaaag 509
Query: 567 ctgaagggaatattgggctatgtcgaggaagatctggtttcctctgacttcattggtgac 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ctgaagggaatattgggctatgtcgaggaagatctggtttcctctgacttcattggtgac 449
Query: 627 aacaggtcaagtatttttgatgccaaagctggaattgctttgaatgataagtttgtgaag 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aacaggtcaagtatttttgatgccaaagctggaattgctttgaatgataagtttgtgaag 389
Query: 687 cttgtttcttggtacgacaatgaggttggttacag 721
|||||||||||||||||||||||||||||||||||
Sbjct: 388 cttgtttcttggtacgacaatgaggttggttacag 354
>contig11602 length=1194 numreads=22 gene=isogroup06511
status=isotig
Length = 1194
Score = 371 bits (187), Expect = e-102
Identities = 577/707 (81%)
Strand = Plus / Plus
Query: 3 ccagaggagattccatggggtcaaactggtgctgagtttgttgttgaatctactggtgtt 62
|||||||| ||||||||||| || | ||||||||| | ||| || ||||| || || |||
Sbjct: 268 ccagaggaaattccatggggccagagtggtgctgattatgtggtggaatccaccggagtt 327
Query: 63 ttcactgacaaggaaaaggctgcagctcacttgaagggtggtgctaagaaggttgttatc 122
|||||||| |||| || || || |||||||||||||||||||| |||||||| ||||
Sbjct: 328 ttcactgatcaggacaaagccgctgctcacttgaagggtggtgcaaagaaggtaattatt 387
Query: 123 tctgctcctagcaaagatgcacctatgtttgttgtgggtgttaatgagaatgaatataag 182
||||| || ||||| ||||| || ||||||||||||||||| ||||| || || || |||
Sbjct: 388 tctgcacccagcaaggatgctcccatgtttgttgtgggtgtcaatgaaaaggagtacaag 447
Query: 183 ccagagcttgacattgtttccaatgctagctgcactactaactgtcttgcccccttggcc 242
| || ||| | || ||||||||||| |||||||| || |||||||| || |||||
Sbjct: 448 tctgaccttactgtcgtctccaatgctagttgcactaccaattgtcttgctcctttggct 507
Query: 243 aaggttataaatgataggtttgggattgttgagggtctaatgaccactgttcactccatc 302
|||||||| ||||| | ||||| |||||||| ||||| ||||||||||| ||||| ||
Sbjct: 508 aaggttatcaatgacaaatttggtattgttgaaggtctcatgaccactgtccactctatt 567
Query: 303 accgccactcagaagactgttgatgggccatcaatgaaggactggagaggtggaagagct 362
||||| || || |||||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 568 accgctacacaaaagactgttgatggaccatcaatgaaggattggagaggtggtagagct 627
Query: 363 gcctccttcaacatcattcctagcagcactggagctgctaaggctgttgggaaggtgcta 422
|| |||||||| |||||||||||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 628 gcttccttcaatatcattcctagcagtactggagctgccaaggctgtagggaaagtgctg 687
Query: 423 cctgctctgaacggcaagcttactggaatggctttccgtgttccaactgttgatgtctct 482
||||| |||| || || | || |||||||||||||||||||| ||||||||||||||
Sbjct: 688 cctgcattgaatggaaaattgacaggaatggctttccgtgttcccactgttgatgtctca 747
Query: 483 gtggttgatctcactgttaggctagagaaggctgctacatatgaacaaattaaagctgct 542
|||||||| || ||||| ||||| |||||| || || ||||| | || ||||| ||
Sbjct: 748 gtggttgaccttactgtgaggcttgagaagaaggccacttatgaggagatcaaagcagcc 807
Query: 543 atcaaagaggagtctgagggaaagctgaagggaatattgggctatgtcgaggaagatctg 602
||||| | || |||||||||| |||| ||||| | || || || || ||| |
Sbjct: 808 atcaaggcagaatctgagggaagtatgaaaggaatcctcggttacactgaagatgatgtt 867
Query: 603 gtttcctctgacttcattggtgacaacaggtcaagtatttttgatgccaaagctggaatt 662
|| || |||| || | |||||||||||||| || || ||||||||||| |||||||||
Sbjct: 868 gtctcaactgattttgtgggtgacaacaggtctagcatctttgatgccaaggctggaatt 927
Query: 663 gctttgaatgataagtttgtgaagcttgtttcttggtacgacaatga 709
|| ||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 928 gcattgaatgataactttgtgaaacttgtctcttggtatgacaatga 974
>seed_E0K9Y9A01EA65Y
Length = 217
Score = 115 bits (58), Expect = 6e-25
Identities = 94/106 (88%)
Strand = Plus / Plus
Query: 373 acatcattcctagcagcactggagctgctaaggctgttgggaaggtgctacctgctctga 432
|||||||||||||||||||||||||||||||||||||||| ||||| || ||||| || |
Sbjct: 109 acatcattcctagcagcactggagctgctaaggctgttggaaaggttcttcctgcactta 168
Query: 433 acggcaagcttactggaatggctttccgtgttccaactgttgatgt 478
| ||||| | ||||||||| | ||||||||||||||||| |||||
Sbjct: 169 atggcaaattgactggaatgtcattccgtgttccaactgtggatgt 214
>seed_E0K9Y9A01BA801
Length = 124
Score = 63.9 bits (32), Expect = 2e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 275 gggtctaatgaccactgttcactccatcaccg 306
||||||||||||||||||||||||||||||||
Sbjct: 9 gggtctaatgaccactgttcactccatcaccg 40
>seed_E0K9Y9A01AJLO5
Length = 119
Score = 52.0 bits (26), Expect = 8e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 294 cactccatcaccgccactcagaagac 319
||||||||||||||||||||||||||
Sbjct: 26 cactccatcaccgccactcagaagac 1