Jatropha Genome Database

Jcr4S28596.10
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jcr4S28596.10
         (376 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29852.m001990 conserved hypothetical protein                          603   e-172
30056.m000855 conserved hypothetical protein                          299   6e-81

>29852.m001990 conserved hypothetical protein
          Length = 1050

 Score =  603 bits (304), Expect = e-172
 Identities = 358/376 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgattattcgttcgccggaaccagaagtcaaaattttggtagatagggatcccatcaaa 60
           ||||||||||||||||||||||||||||  |||| ||||||||||||||||||| |||||
Sbjct: 1   atgattattcgttcgccggaaccagaagaaaaaaatttggtagatagggatcccgtcaaa 60

                                                                       
Query: 61  acttctttcgaggaatgggccagacccggtcatttctcaagaacaatagctaagggacct 120
           |||||||||||||||||||| ||||| |||||||||||||||| ||||||||| ||||| 
Sbjct: 61  acttctttcgaggaatgggctagaccgggtcatttctcaagaataatagctaaaggacca 120

                                                                       
Query: 121 gatactaccacttggatctggaacctacatgctgatgctcacgatttcgatagccatacc 180
           ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 121 gatactaccacttggatatggaacctacatactgatgctcacgatttcgatagctatacc 180

                                                                       
Query: 181 agtgatttggaggagatttctcgaaaagtatttagtgctcatttcggccaactctccatc 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 181 agtgatttggaggagatttctcgaaaagtatttagtgctcatttcggccaactctcaatc 240

                                                                       
Query: 241 atctttctttggctgagtggcatgtatttccacggtgctcgtttttccaattatgaagca 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atctttctttcgctgagtggcatgtatttccacggtgctcgtttttccaattatgaagca 300

                                                                       
Query: 301 tggctaagtgatcctactcacattggacctagtgcccaggtggtttggccgatagtgggt 360
           |||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| 
Sbjct: 301 tggctaagtgatcctactcacattggacctagcgcccaagtggtttggccaatagtgggc 360

                           
Query: 361 caagaaatattgaatg 376
           ||||||||||||||||
Sbjct: 361 caagaaatattgaatg 376


>30056.m000855 conserved hypothetical protein
          Length = 1308

 Score =  299 bits (151), Expect = 6e-81
 Identities = 193/207 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgattattcgttcgccggaaccagaagtcaaaattttggtagatagggatcccatcaaa 60
           |||||||||| ||||| |||||||||||| ||||||||| |||||||||||||| |||||
Sbjct: 1   atgattattcattcgctggaaccagaagtaaaaattttgatagatagggatcccgtcaaa 60

                                                                       
Query: 61  acttctttcgaggaatgggccagacccggtcatttctcaagaacaatagctaagggacct 120
           |||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||| 
Sbjct: 61  acttctttcgaggaatgggctagaccgggtcatttctcaagaacaatagctaaaggacca 120

                                                                       
Query: 121 gatactaccacttggatctggaacctacatgctgatgctcacgatttcgatagccatacc 180
            ||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||
Sbjct: 121 tatactaccacttggatctggaacctacatgctggtgctcataatttcgatagccatacc 180

                                      
Query: 181 agtgatttggaggagatttctcgaaaa 207
           ||| |||||||||||||||||||||||
Sbjct: 181 agttatttggaggagatttctcgaaaa 207