Jatropha Genome Database

Jcr4S28596.10
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jcr4S28596.10
         (376 letters)

Database: JAT_unigene 
           122,497 sequences; 49,272,789 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

contig06910  length=15641  numreads=1682  gene=isogroup01819  st...   729   0.0  
seed_E0K9Y9A01DNHTZ                                                    64   1e-09

>contig06910  length=15641  numreads=1682  gene=isogroup01819
            status=isotig
          Length = 15641

 Score =  729 bits (368), Expect = 0.0
 Identities = 374/376 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    atgattattcgttcgccggaaccagaagtcaaaattttggtagatagggatcccatcaaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5420 atgattattcgttcgccggaaccagaagtcaaaattttggtagatagggatcccatcaaa 5361

                                                                        
Query: 61   acttctttcgaggaatgggccagacccggtcatttctcaagaacaatagctaagggacct 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5360 acttctttcgaggaatgggccagacccggtcatttctcaagaacaatagctaagggacct 5301

                                                                        
Query: 121  gatactaccacttggatctggaacctacatgctgatgctcacgatttcgatagccatacc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5300 gatactaccacttggatctggaacctacatgctgatgctcacgatttcgatagccatacc 5241

                                                                        
Query: 181  agtgatttggaggagatttctcgaaaagtatttagtgctcatttcggccaactctccatc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5240 agtgatttggaggagatttctcgaaaagtatttagtgctcatttcggccaactctccatc 5181

                                                                        
Query: 241  atctttctttggctgagtggcatgtatttccacggtgctcgtttttccaattatgaagca 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5180 atctttctttggctgagtggcatgtatttccacggtgctcgtttttccaattatgaagca 5121

                                                                        
Query: 301  tggctaagtgatcctactcacattggacctagtgcccaggtggtttggccgatagtgggt 360
            |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 5120 tggctaagtgatcctactcacattggacctagcgcccaagtggtttggccgatagtgggt 5061

                            
Query: 361  caagaaatattgaatg 376
            ||||||||||||||||
Sbjct: 5060 caagaaatattgaatg 5045


>seed_E0K9Y9A01DNHTZ
          Length = 268

 Score = 63.9 bits (32), Expect = 1e-09
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                               
Query: 102 aacaatagctaagggacctgatactaccacttggat 137
           ||||||||||||||||||||||||||||| ||||||
Sbjct: 193 aacaatagctaagggacctgatactaccatttggat 228