Jatropha Genome Database

Jcr4S28596.10
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4S28596.10
         (125 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g22110.1                                                        80   4e-16

>Glyma04g22110.1 
          Length = 129

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/41 (90%), Positives = 38/41 (92%)

Query: 85  LSGMYFHGARFSNYEAWLSDPTHIGPSAQVVWPIVGQEILN 125
           +SGMYFHGA FSNYEAWLSDPTHI PSAQVVWPIV QEILN
Sbjct: 1   MSGMYFHGAHFSNYEAWLSDPTHIRPSAQVVWPIVSQEILN 41