Jatropha Genome Database

Jcr4S26587.10
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jcr4S26587.10 
         (1020 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29917.m001954 conserved hypothetical protein                          198   5e-50

>29917.m001954 conserved hypothetical protein
          Length = 336

 Score =  198 bits (100), Expect = 5e-50
 Identities = 118/124 (95%)
 Strand = Plus / Plus

                                                                       
Query: 112 atgaaaggccaagctgacacaataggcattgcgatgcgaagagctttgcttggagaaata 171
           |||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||| 
Sbjct: 1   atgaaaggccaagcagacacaataggcattgcgacgcgaagagctttgattggagaaatc 60

                                                                       
Query: 172 gaaggaacatgtatcacacgtgcaaaatctgagaaaataccacacgaattttctactata 231
           |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 61  gaaggaacatgtatcacacgtgcacaatctgagaaaataccacacgaattttcgactata 120

               
Query: 232 gcag 235
           ||||
Sbjct: 121 gcag 124