Jatropha Genome Database

Jcr4S26587.10
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4S26587.10 
         (339 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29917.m001954 conserved hypothetical protein                           84   9e-17

>29917.m001954 conserved hypothetical protein
          Length = 111

 Score = 84.0 bits (206), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 38/41 (92%), Positives = 40/41 (97%)

Query: 38 MKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEFSTIA 78
          MKGQADTIGIA RRAL+GEIEGTCITRA+SEKIPHEFSTIA
Sbjct: 1  MKGQADTIGIATRRALIGEIEGTCITRAQSEKIPHEFSTIA 41