Jatropha Genome Database
- Jcr4S26587.10
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jcr4S26587.10
(1020 letters)
Database: JAT_unigene
122,497 sequences; 49,272,789 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
contig00892 length=7086 numreads=664 gene=isogroup00047 stat... 1744 0.0
contig00458 length=765 numreads=83 gene=isogroup00004 status... 115 8e-25
tissues_GDVQYP002G0Q4E 58 2e-07
>contig00892 length=7086 numreads=664 gene=isogroup00047
status=isotig
Length = 7086
Score = 1744 bits (880), Expect = 0.0
Identities = 939/960 (97%), Gaps = 6/960 (0%)
Strand = Plus / Minus
Query: 1 atggttcgagagaaagtaacaatatctactcggacactgcagtggaaatgtgttgaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 atggttcgagagaaagtaacaatatctactcggacactgcagtggaaatgtgttgaatca 898
Query: 61 agaacggacaataaacgtctttattatggacgctttattctatctccacttatgaaaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 agaacggacaataaacgtctttattatggacgctttattctatctccacttatgaaaggc 838
Query: 121 caagctg--acacaataggcattgcgatgcgaagagctttgcttggagaaatagaaggaa 178
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 caagcttgaacacaataggcattgcgatgcgaagagctttgcttggagaaatagaaggaa 778
Query: 179 catgtatcacacgtgcaaaatctgagaaaataccacacgaattttctactatagcaggta 238
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 777 catgtatcacacgtgcaaaatttgagaaaataccacacgaattttctactatagcaggta 718
Query: 239 ttcaagaatcaatacatgaaattttaatgaatttgaaaaatgttgtattgaaaagcaatt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ttcaagaatcaatacatgaaattttaatgaatttgaaaaatgttgtattgaaaagcaatt 658
Query: 299 tgtatggaacttgtgacgcgtctatttatgtcaaaggtcctggatatgtaactgcccaag 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tgtatggaacttgtgacgcgtctatttatgtcaaaggtcctggatatgtaactgcccaag 598
Query: 359 acatcatcttaccgccttttgtggaaattattgataatacacagcatatcgctagcctaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 acatcatcttaccgccttttgtggaaattattgataatacacagcatatcgctagcctaa 538
Query: 419 cggaatcaattgatttgtgtattggattacaaatcgagaggaatcgcggctatcgtataa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 cggaatcaattgatttgtgtattggattacaaatcgagaggaatcgcggctatcgtataa 478
Query: 479 aaccgacaaataactttcaggacggaagttatcctatagatgctgtattcatgcctgttc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aaccgacaaataactttcaggacggaagttatcctatagatgctgtattcatgcctgttc 418
Query: 539 gaaatgcgaatcatagtgttcattcttatggaaatggaaatgaaaagcaagagatacttt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaaatgcgaatcatagtgttcattcttatggaaatggaaatgaaaagcaagagatacttt 358
Query: 599 ttctcgaaatatggacaaacggaagtttaactcctaaagaagcacttcatgaagcctccc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttctcgaaatatggacaaacggaagtttaactcctaaagaagcacttcatgaagcctccc 298
Query: 659 gaaatttgattgatttatttattccttttctacatgcagaagaagaaaacttacatttag 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gaaatttgattgatttatttattccttttctacatgcagaagaagaaaacttacatttag 238
Query: 719 aaataaatcaacacaaggttactttacccctttttacttttcatggtagattgactaaat 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 aaataaatcaacacaaggttactttacccctttttacttttcatggtagattgactaaat 178
Query: 779 taagnnnnnnnnnnnnngaaatagcattgaaatacatttttattgaccaatcagaattga 838
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 taagaaaaaatcaaaaagaaatagcattgaaatacatttttattgaccaatcagaattga 118
Query: 839 cccctaagacctataattgcctc-aaaaggtccaatatacatacattatcggacctttta 897
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 117 ---ctaagacctataattgcctcaaaaaggtccaatatacatacattatcggacctttta 61
Query: 898 aataagagtcaagaagatcttatgaaaattgaaaattttcgcatagacgatgtaaaacat 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 aataagagtcaagaagatcttatgaaaattgaaaattttcgcatagacgatgtaaaacat 1
>contig00458 length=765 numreads=83 gene=isogroup00004
status=isotig
Length = 765
Score = 115 bits (58), Expect = 8e-25
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 963 gggtattctagaaatagaaaaacatttcgcaattgatttaccaaagaataaaatataa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggtattctagaaatagaaaaacatttcgcaattgatttaccaaagaataaaatataa 58
>tissues_GDVQYP002G0Q4E
Length = 223
Score = 58.0 bits (29), Expect = 2e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 924 aattgaaaattttcgcatagacgatgtaaaacatatattgggtattctagaaa 976
|||||| |||||||||||| | ||||||||||| ||||||||||||| ||||
Sbjct: 13 aattgagaattttcgcataccctatgtaaaacatgtattgggtattctggaaa 65