Jatropha Genome Database

Jcr4S26587.10
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4S26587.10 
         (339 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g40980.1                                                       100   2e-21

>Glyma01g40980.1 
          Length = 79

 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 60/75 (80%)

Query: 260 LRKNQKEIALKYIFIDQSELTPKTYNCLKRSNIHTLSDLLNKSQEDLMKIENFRIDDVKH 319
           LRK +KEIALK IFIDQ EL P+ YNCLKRSNIH L +LLN SQ+DL+KIE+FR++DV +
Sbjct: 5   LRKKKKEIALKSIFIDQLELPPRMYNCLKRSNIHILLELLNSSQKDLLKIEHFRVEDVIY 64

Query: 320 ILGILEIEKHFAIDL 334
           IL  LE EK F I+ 
Sbjct: 65  ILDFLETEKAFCINF 79