Jatropha Genome Database

Jcr4S15788.10
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4S15788.10 /short
         (68 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29996.m000134 serine-threonine protein kinase, plant-type, putative    62   4e-11

>29996.m000134 serine-threonine protein kinase, plant-type,
          putative
          Length = 395

 Score = 62.4 bits (150), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/66 (54%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 1  MGLLSNFCGCLEK-LKFARXXXXXXXXXXXXXXXXXX-XXRTLQVATNFFSESNQLGHGG 58
          MGLLS+ C CLEK LK  R                     RTLQ+ATNFFSE NQLGHGG
Sbjct: 1  MGLLSSLCACLEKRLKSGRGGGGADDADDEVESHDLFFDLRTLQIATNFFSELNQLGHGG 60

Query: 59 FGPVYK 64
          FGPV+K
Sbjct: 61 FGPVFK 66