Jatropha Genome Database

Jcr4S15788.10
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4S15788.10 /short
         (68 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G61475.1 | Symbols:  | ATP binding;protein kinases | chr1:226...    47   3e-06

>AT1G61475.1 | Symbols:  | ATP binding;protein kinases |
           chr1:22679770-22680771 REVERSE LENGTH=212
          Length = 212

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/28 (71%), Positives = 24/28 (85%)

Query: 40  TLQVATNFFSESNQLGHGGFGPVYKVSF 67
           T+Q ATN FS SN+LG GGFGPVYK++F
Sbjct: 86  TIQNATNNFSISNKLGQGGFGPVYKITF 113