Jatropha Genome Database

Jcr4S15788.10
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jcr4S15788.10 /short
         (207 letters)

Database: JAT_unigene 
           122,497 sequences; 49,272,789 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

contig19175  length=427  numreads=6  gene=isogroup14084  status=...   383   e-106

>contig19175  length=427  numreads=6  gene=isogroup14084
           status=isotig
          Length = 427

 Score =  383 bits (193), Expect = e-106
 Identities = 193/193 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgggccttctctccaatttctgcggctgcctggagaaactcaaattcgcccgagccact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atgggccttctctccaatttctgcggctgcctggagaaactcaaattcgcccgagccact 213

                                                                       
Query: 61  ggtacaggcggcgacgatgacgacgctaacactaatgacctcttcttcgacctccgcacg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ggtacaggcggcgacgatgacgacgctaacactaatgacctcttcttcgacctccgcacg 153

                                                                       
Query: 121 cttcaagtcgctaccaatttcttctcagagtcgaatcagcttggtcatggaggattcggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 cttcaagtcgctaccaatttcttctcagagtcgaatcagcttggtcatggaggattcggt 93

                        
Query: 181 cctgtttacaaag 193
           |||||||||||||
Sbjct: 92  cctgtttacaaag 80