Jatropha Genome Database

Jcr4S09385.70
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4S09385.70 /short/partial
         (77 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g36150.1                                                       114   2e-26

>Glyma12g36150.1 
          Length = 320

 Score =  114 bits (286), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 67/77 (87%), Positives = 70/77 (90%)

Query: 1  MQTRKTFSWIKEEITRSISVSLMVYIITWASISNAYPIFAQQGYENPREATGRIVCANCH 60
          MQTR  FS IKE ITRSIS+S+M+YII  A ISNAYPIFAQQGYENPREATGRIVCANCH
Sbjct: 1  MQTRNAFSCIKEGITRSISISIMIYIIIRAPISNAYPIFAQQGYENPREATGRIVCANCH 60

Query: 61 LANKPVDIEVPQAVLPD 77
          LANKPVDIEVPQAVLPD
Sbjct: 61 LANKPVDIEVPQAVLPD 77