Jatropha Genome Database
- Jcr4S09385.50
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jcr4S09385.50
(555 letters)
Database: JAT_unigene
122,497 sequences; 49,272,789 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
contig06913 length=5656 numreads=435 gene=isogroup01822 stat... 999 0.0
contig03315 length=1829 numreads=63 gene=isogroup00617 statu... 88 1e-16
>contig06913 length=5656 numreads=435 gene=isogroup01822
status=isotig
Length = 5656
Score = 999 bits (504), Expect = 0.0
Identities = 538/555 (96%)
Strand = Plus / Plus
Query: 1 atgagttggcgatcagaacgtatatggatagaacttatagcggggtctcgaaaaacaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 atgagttggcgatcagaacgtatatggatagaacttatagcggggtctcgaaaaacaagt 646
Query: 61 aatttctgctgggcccttatactttttttaggttcattgggnnnnnnnnnggttggaatt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 647 aatttctgctgggcccttatactttttttaggttcattgggtttttttttggttggaatt 706
Query: 121 tccagttatcttggcaaaaatttgatatctttatttccatctcagcaaataannnnnnnn 180
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 tccagttatcttggcaaaaatttgatatctttatttccatctcagcaaataatttttttt 766
Query: 181 ccacaagggatcgtgatgtctttctatgggatcgccggtctatttattagttcttatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 ccacaagggatcgtgatgtctttctatgggatcgccggtctatttattagttcttatttg 826
Query: 241 tggtgcacaattttgtggaatgtaggtagtggttatgatcgattcgatagaaaagaagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 tggtgcacaattttgtggaatgtaggtagtggttatgatcgattcgatagaaaagaagga 886
Query: 301 atagtgtgtatttttcgctggggatttcctggaaaaaatcgtcgcatcttactccgattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 atagtgtgtatttttcgctggggatttcctggaaaaaatcgtcgcatcttactccgattc 946
Query: 361 cttatgaaagatattcagtctattaggctagaagttaaagagggtatttacgctcggcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 cttatgaaagatattcagtctattaggctagaagttaaagagggtatttacgctcggcgt 1006
Query: 421 gccctttatatggaaatccgaggccggggggccattcctttgactcgtactgatgagaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 gccctttatatggaaatccgaggccggggggccattcctttgactcgtactgatgagaat 1066
Query: 481 ttgactccgcgagaaattgagcaaaaagtagccgaattggcctattttttgcgtgtacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 ttgactccgcgagaaattgagcaaaaagtagccgaattggcctattttttgcgtgtacca 1126
Query: 541 attgaagtattttga 555
|||||||||||||||
Sbjct: 1127 attgaagtattttga 1141
>contig03315 length=1829 numreads=63 gene=isogroup00617
status=isotig
Length = 1829
Score = 87.7 bits (44), Expect = 1e-16
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 468 tactgatgagaatttgactccgcgagaaattg-agcaaaaagtagccgaattggcctatt 526
||||||||||||||||||||| |||||||||| ||||||||||| | | |||||||||||
Sbjct: 105 tactgatgagaatttgactccacgagaaattgtagcaaaaagtaacagcattggcctatt 164
Query: 527 ttttgcgtgtaccaat 542
|||||| ||||||||
Sbjct: 165 ttttgcacgtaccaat 180