Jatropha Genome Database

Jcr4S09385.10
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4S09385.10
         (167 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30185.m000928 conserved hypothetical protein                          337   2e-93
30184.m001172 conserved hypothetical protein                          241   1e-64
29923.m000793 conserved hypothetical protein                          185   7e-48

>30185.m000928 conserved hypothetical protein
          Length = 690

 Score =  337 bits (863), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 159/167 (95%), Positives = 160/167 (95%)

Query: 1   MHFRVLAKALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDW 60
           MHFRVLAKALR+SGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDW
Sbjct: 237 MHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDW 296

Query: 61  VSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACV 120
           VSLPGVLPVAS GIHVWHMPAL EIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACV
Sbjct: 297 VSLPGVLPVASRGIHVWHMPALIEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACV 356

Query: 121 QARNEGRDLAREGNEIIREASKWSPELAAACEVWKEIKFEFQAMDTL 167
           QARNEGRDLAREGNEIIRE  KWSPELAA CEVWKEIKFEF AMDT 
Sbjct: 357 QARNEGRDLAREGNEIIREVGKWSPELAATCEVWKEIKFEFPAMDTF 403


>30184.m001172 conserved hypothetical protein
          Length = 245

 Score =  241 bits (615), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 122/161 (75%), Positives = 128/161 (79%), Gaps = 17/161 (10%)

Query: 7   AKALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGV 66
           AK LR+S  DHIH GTVVGKLEGERDITLGFVDL  DDFI+KDR R              
Sbjct: 102 AKTLRMSSEDHIHTGTVVGKLEGERDITLGFVDLSHDDFIKKDRCR-------------- 147

Query: 67  LPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEG 126
              AS GIHV +MPALTEIFGDDSVLQF GGTLGHPWGNAPGA+ANRVALEACVQARNEG
Sbjct: 148 ---ASRGIHVLYMPALTEIFGDDSVLQFNGGTLGHPWGNAPGAIANRVALEACVQARNEG 204

Query: 127 RDLAREGNEIIREASKWSPELAAACEVWKEIKFEFQAMDTL 167
           RDLA EGNEIIRE  KW+ +LA ACEVWKEIKFEF AMDTL
Sbjct: 205 RDLAHEGNEIIREFGKWNRKLATACEVWKEIKFEFPAMDTL 245


>29923.m000793 conserved hypothetical protein
          Length = 364

 Score =  185 bits (470), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 100/167 (59%), Positives = 103/167 (61%), Gaps = 51/167 (30%)

Query: 1   MHFRVLAKALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDW 60
           MHF VLAK L +S GDHIHAGTVV                        DR RGIYFTQDW
Sbjct: 249 MHFHVLAKVLHMSSGDHIHAGTVV------------------------DRIRGIYFTQDW 284

Query: 61  VSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACV 120
           VSLPGVLPVASGG                           HPWGNAPG VANRVALEACV
Sbjct: 285 VSLPGVLPVASGG---------------------------HPWGNAPGVVANRVALEACV 317

Query: 121 QARNEGRDLAREGNEIIREASKWSPELAAACEVWKEIKFEFQAMDTL 167
           QARNEG DLAREGNEII E  KWSPELAAACE+WKEI F+F  MDTL
Sbjct: 318 QARNEGHDLAREGNEIICEVGKWSPELAAACEIWKEITFDFPTMDTL 364