Jatropha Genome Database
- Jcr4S09385.10
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jcr4S09385.10
(504 letters)
Database: JAT_unigene
122,497 sequences; 49,272,789 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
contig02848 length=1686 numreads=1700 gene=isogroup00461 sta... 999 0.0
callus_GF8I98N02J08ER 145 4e-34
leaf_GE9D68U01C3P98 125 4e-28
leaf_GE9D68U01AZDHO 62 5e-09
>contig02848 length=1686 numreads=1700 gene=isogroup00461
status=isotig
Length = 1686
Score = 999 bits (504), Expect = 0.0
Identities = 504/504 (100%)
Strand = Plus / Minus
Query: 1 atgcattttcgtgtactagctaaggcgttacgtttgtctggtggagatcatattcacgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 atgcattttcgtgtactagctaaggcgttacgtttgtctggtggagatcatattcacgct 488
Query: 61 ggtaccgtagtaggtaaacttgaaggggaaagagacatcactttgggctttgttgattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ggtaccgtagtaggtaaacttgaaggggaaagagacatcactttgggctttgttgattta 428
Query: 121 ctgcgtgatgattttattgaaaaagatcgaagccgcggtatttatttcactcaagattgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctgcgtgatgattttattgaaaaagatcgaagccgcggtatttatttcactcaagattgg 368
Query: 181 gtctctctaccgggtgttttgcctgtagcttcaggaggtattcacgtttggcatatgcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gtctctctaccgggtgttttgcctgtagcttcaggaggtattcacgtttggcatatgcct 308
Query: 241 gctctgaccgagatctttggagatgattccgtactacaattcggtggaggaactttaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gctctgaccgagatctttggagatgattccgtactacaattcggtggaggaactttaggg 248
Query: 301 cacccttggggaaatgcacctggtgccgtagctaatcgagtagctctagaagcatgtgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cacccttggggaaatgcacctggtgccgtagctaatcgagtagctctagaagcatgtgta 188
Query: 361 caagctcgtaatgaaggacgtgatcttgctcgtgagggtaatgaaattatccgtgaggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 caagctcgtaatgaaggacgtgatcttgctcgtgagggtaatgaaattatccgtgaggct 128
Query: 421 agcaaatggagtcctgaactagctgctgcttgtgaagtatggaaggagattaaatttgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 agcaaatggagtcctgaactagctgctgcttgtgaagtatggaaggagattaaatttgaa 68
Query: 481 ttccaagcgatggatactttgtaa 504
||||||||||||||||||||||||
Sbjct: 67 ttccaagcgatggatactttgtaa 44
>callus_GF8I98N02J08ER
Length = 101
Score = 145 bits (73), Expect = 4e-34
Identities = 80/81 (98%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 1 atgcattttcgtgtactagctaa-ggcgttacgtttgtctggtggagatcatattcacgc 59
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 81 atgcattttcgtgtactagctaaaggcgttacgtttgtctggtggagatcatattcacgc 22
Query: 60 tggtaccgtagtaggtaaact 80
|||||||||||||||||||||
Sbjct: 21 tggtaccgtagtaggtaaact 1
>leaf_GE9D68U01C3P98
Length = 72
Score = 125 bits (63), Expect = 4e-28
Identities = 70/71 (98%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 41 gtggagatcatattcacgctggtaccgtagtaggtaaacttgaaggggaaagagacatca 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggagatcatattcacgctggtaccgtagtaggtaaacttgaaggggaaagagacatca 60
Query: 101 -ctttgggctt 110
||||||||||
Sbjct: 61 cctttgggctt 71
>leaf_GE9D68U01AZDHO
Length = 64
Score = 61.9 bits (31), Expect = 5e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 1 atgcattttcgtgtactagctaaggcgttac 31
|||||||||||||||||||||||||||||||
Sbjct: 32 atgcattttcgtgtactagctaaggcgttac 2