Jatropha Genome Database
- Jcr4S05943.70
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Jcr4S05943.70
(954 letters)
Database: Medicago_aa3.5
47,529 sequences; 14,043,872 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr8g104380.1 AP-3 complex subunit delta-1 (AHRD V1 *-*- ... 1071 0.0
IMGA|Medtr5g034780.1 AP-1 complex subunit gamma-1 (AHRD V1 ***- ... 129 9e-30
IMGA|Medtr8g072250.1 AP-4 complex subunit epsilon-1 (AHRD V1 ***... 98 2e-20
IMGA|Medtr8g072250.2 AP-4 complex subunit epsilon-1 (AHRD V1 ***... 93 7e-19
>IMGA|Medtr8g104380.1 AP-3 complex subunit delta-1 (AHRD V1 *-*-
O14617); contains Interpro domain(s) IPR017105 Adaptor
protein complex AP-3, delta subunit
chr08_pseudomolecule_IMGAG_V3.5 30759301-30762337 E
EGN_Mt100125 20100825
Length = 968
Score = 1071 bits (2771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/974 (57%), Positives = 688/974 (70%), Gaps = 31/974 (3%)
Query: 2 ASPSLMDTLFQRTLDDIIKGLRHQQTGESAFISKVMEEIRREIKSTDLHTKSIALHKLTY 61
+S S+MD LFQRTLDD+IK +R Q ES+FISK +EEIRREIKSTD TKS AL KLTY
Sbjct: 5 SSSSIMDNLFQRTLDDLIKSMRLQLLTESSFISKSIEEIRREIKSTDPQTKSTALQKLTY 64
Query: 62 LNSIHFIDISWAAFHAIECISSPNFSHKKIGYLAISQSFNESTPVILLITNQLRKDLRSN 121
L+SIH ID+SWA+FH +E +SS F HK+IGY A S SFN+STPV+LLITNQLRKDL S
Sbjct: 65 LSSIHGIDMSWASFHVVEVMSSSLFLHKRIGYHAASVSFNDSTPVLLLITNQLRKDLSST 124
Query: 122 NEFEVSLALECLSTIGTVDLCRDLTPEVFTLMSSSKLLVRKKALGVILRVFGKYPDAVRV 181
N F SLAL CLSTI T+DL RDLTP++F L+SSS++ +R KA+ V+LRVF KYPDAVRV
Sbjct: 125 NHFHASLALHCLSTIATLDLARDLTPDIFNLLSSSRVFIRNKAIAVVLRVFDKYPDAVRV 184
Query: 182 CFKRLVECLDGTDQQIASAVIGVFCELASKDPRSYLPLAPEFYRVLVDSRNNWVLIKVLK 241
CFKRLVE L+ +D ++ AVIGVFCEL+SKDPRSYLPLAPEFYR+LVDS+NNWVLIKVLK
Sbjct: 185 CFKRLVENLESSDPKVVIAVIGVFCELSSKDPRSYLPLAPEFYRILVDSKNNWVLIKVLK 244
Query: 242 IFAKLAPLEPRLAKRVVEPICDIMRRTGAKSLMFECIRTVATSFTDYESAVELAVAKNGE 301
IFA+LAPLEPRL KR+VEPIC+ +RR+GAKSL+FEC+RTV TS +D+ESAV+LAV K E
Sbjct: 245 IFARLAPLEPRLGKRIVEPICEHIRRSGAKSLVFECVRTVITSLSDHESAVKLAVTKIRE 304
Query: 302 FLTDDDPNLKYLGLHVLSIIAPKHLWAVLQNKEVVIMSLSDADPNIKLESLRLVMAMVSE 361
L D DPNL+YLGLH LS+ APKHLWAVL+NK+ VI SL D D NIK+ESLRL+MAMVSE
Sbjct: 305 LLVDQDPNLRYLGLHALSVAAPKHLWAVLENKDAVIKSLDDEDSNIKIESLRLLMAMVSE 364
Query: 362 SNVVEFCRVLVNYSLKSDPEFCNEILGSILSRCRQNFYEIIVDFDWYVSLLGEISRIPHC 421
SNVVE RVL+NY+LKSDPEFCNEILGSIL+ C +N YEIIVDFDWYVSLLGE++ IPHC
Sbjct: 365 SNVVEISRVLLNYALKSDPEFCNEILGSILTTCGRNLYEIIVDFDWYVSLLGEMTMIPHC 424
Query: 422 QKGEEIENQLIDIGMRVKDVRLPLVHVGRDLLIDPALLGNPFLHRILSAAAWVCGEYVKF 481
QKGEEIENQLIDIGMRVKD RL LV V RDLLIDPALLGN +LHRIL AAAWV GEYV+
Sbjct: 425 QKGEEIENQLIDIGMRVKDARLQLVRVARDLLIDPALLGNVYLHRILCAAAWVAGEYVQL 484
Query: 482 SKNPVELVEALLQPRTSLLPPSVRTVYMQSAFKILIFCLHFYLLQRGCIADDKASEVMDL 541
+ NP+EL++AL+QPRT+LLPPS+R VY+ S K++ FCL YL + + E+
Sbjct: 485 ASNPLELIDALVQPRTNLLPPSIRAVYINSVLKVVSFCLECYLDKDEGTSSSHDGELASG 544
Query: 542 ASQ----RECSGMSDLATHKASACYEQEEGFNPRDSNRSY--EDLSIIDGGDDQTTSSPG 595
S+ + + +L + YEQ+EGFNPR+S EDLS+ + D T S
Sbjct: 545 RSEMFVVKNDTEAPELVATCEGSTYEQDEGFNPRNSTAESCDEDLSVENDSDRVVTLSSK 604
Query: 596 KSLTHESFSNLLTLIELALNPLSRNYDVEVQERARNILGFVELIKQQISDCFFPKDVNXX 655
K+ THES NLL IEL L+ N DVEV ERARNI FV+LIK +I D
Sbjct: 605 KNFTHESVVNLLNRIELIFGSLTANQDVEVLERARNIFAFVQLIKAEIIDNSGQNADTVD 664
Query: 656 XXXXXXXXXXXXXYDAFAEELGPVSVNAQERVPVPDGLMLKENLSDLEAICGDVQX-XXX 714
DAF+ ELGPVS++AQ RV PDGL LKENL DL+AICGD++
Sbjct: 665 KKYSQISTVIKSIRDAFSMELGPVSISAQGRVTAPDGLALKENLDDLKAICGDIELPSSV 724
Query: 715 XXXXXXXXYGEDVGASPITQXXXXXXXXXXXXXLLAEHRKRHGLYYLPSEKNEILANDYP 774
+G AS L EHRKRHGLYYL S+K+EI+ NDYP
Sbjct: 725 SFYTGGPQFGTTSDASSSNLLKNDESGQSNESTSLLEHRKRHGLYYLASDKSEIVPNDYP 784
Query: 775 PANDLKSSIDTHDDAQDLVKLADQSLVSKRKSSLAKPRPVVVKLDEGDV-PLTAKKPDRQ 833
PAND KS+ + +D+A +L KL +QS++ K++++ KPRPVVV+LD+GDV P+ K+P+R+
Sbjct: 785 PANDPKSNSNINDEADELTKLTEQSVLLKKRTNQMKPRPVVVRLDDGDVAPVPNKRPERR 844
Query: 834 DGLLSGAVRDIL---------LANPSDETSSNRKGKEKQNVD-PLESREILG-GEKPD-- 880
D LSGA++D+L +NP D++S+ +KGK+K D P E +E LG EKPD
Sbjct: 845 DNSLSGAIKDVLGSETNPSLSQSNPLDKSSTKQKGKKKLGTDLPSEMKENLGDAEKPDPE 904
Query: 881 LGNPXXXXXXXXXXGKEKGTKSVEKKNADENDDXXXXXXXXXXXXXXXXXXXQRADAPTL 940
+ N GKE K VE + +D+ QRA++P L
Sbjct: 905 IPNSSSKNKERRRRGKE---KIVEGEESDQKG------KKKSSHRHGRRKTHQRANSP-L 954
Query: 941 TVVTQTPVIPDFLL 954
VV+QTPVIPDFLL
Sbjct: 955 NVVSQTPVIPDFLL 968
>IMGA|Medtr5g034780.1 AP-1 complex subunit gamma-1 (AHRD V1 ***-
B6SV75_MAIZE); contains Interpro domain(s) IPR017107
Adaptor protein complex AP-1, gamma subunit
chr05_pseudomolecule_IMGAG_V3.5 14659661-14673676 E
EGN_Mt100125 20100825
Length = 872
Score = 129 bits (324), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 198/428 (46%), Gaps = 47/428 (10%)
Query: 15 LDDIIKGLRHQQTG--ESAFISKVMEEIRREIKSTDLHTKSIALHKLTYLNSIHFIDISW 72
L D+I+ +R +T E + K IR I D + + KL +++ + + +
Sbjct: 10 LRDMIRAIRACKTAAEERGVVRKECAAIRASINENDQDYRHRNMAKLMFIHMLGY-PTHF 68
Query: 73 AAFHAIECISSPNFSHKKIGYLAISQSFNESTPVILLITNQLRKDLRSNNEFEVSLALEC 132
++ I+SP F K+IGYL + +E V++L+TN L++DL N++ V LAL
Sbjct: 69 GQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCA 128
Query: 133 LSTIGTVDLCRDLTPEVFTLMSSSKLLVRKKALGVILRVFGKYPD--------------- 177
L I + ++ RDL PEV L+ +RKKA +R+ K PD
Sbjct: 129 LGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFINPATSLLRE 188
Query: 178 --------AVRVCF---KRLVECLDGTDQQIASAVIGVFCELASKDPRSYLPLAPEFYRV 226
V++C K E L+ ++ ++ +LA+ P +PE+
Sbjct: 189 KHHGVLITGVQLCTDLCKTSTEALEHIRKKCTDGLVRTLKDLANS------PYSPEYD-- 240
Query: 227 LVDSRNNWVLIKVLKIFAKLAPLEPRLAKRVVEPICDIMRRT-----GAKSLMFECIRTV 281
+ + ++ I++LK+ L + + + + + + +T ++++EC++T+
Sbjct: 241 IAGITDPFLHIRLLKLLRVLGEGDADASDSMNDILAQVATKTESNKVAGNAILYECVQTI 300
Query: 282 ATSFTDYESAVELAVAKNGEFLTDDDPNLKYLGLHVLSIIAPKHLWAVLQNKEVVIMSLS 341
S D LA+ G FL++ D N++Y+ L++L AV +++ ++ +
Sbjct: 301 -MSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMRAVTADAQAVQRHRATILECVK 359
Query: 342 DADPNIKLESLRLVMAMVSESNVVEFCRVLVNYSLKSDPEFCNEILGSILSRCRQNFYEI 401
D D +I+ +L LV +V+E+NV + LV+Y SD +F ++ I S + E
Sbjct: 360 DLDASIRKRALELVYVLVNETNVKPLVKDLVDYLEVSDLDFRGDLTTKICSIVAKFSPEK 419
Query: 402 IVDFDWYV 409
I WY+
Sbjct: 420 I----WYI 423
>IMGA|Medtr8g072250.1 AP-4 complex subunit epsilon-1 (AHRD V1 ***-
Q9UPM8); contains Interpro domain(s) IPR011989
Armadillo-like helical chr08_pseudomolecule_IMGAG_V3.5
18898759-18914493 E EGN_Mt100125 20100825
Length = 1018
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 209/528 (39%), Gaps = 85/528 (16%)
Query: 17 DIIK--GLRHQQTGESAFISKVMEEIRREIKSTDLHTKSIALH--KLTYLNSIHFIDISW 72
D+IK G + E + + +E ++R I D+ + + + +L Y+ + D S+
Sbjct: 27 DLIKSIGESRSKAEEDRIVIREIETLKRRISEPDIPKRKMKEYIIRLLYVEMLGH-DASF 85
Query: 73 AAFHAIECISSPNFSHKKIGYLAISQSFNESTPVILLITNQLRKDLRSNNEFEVSLALEC 132
HA++ N K+ GYLA++ N+ +I+LI N ++KDL+S+N V AL
Sbjct: 86 GYIHAVKMTHDDNLPSKRTGYLAVTLFLNDDHDLIILIVNTIQKDLKSDNYLVVCAALNA 145
Query: 133 LSTIGTVDLCRDLTPEVFTLMSSSKLLVRKKALGVILRVFGKYPDAVRVCFKRLVECLDG 192
+ + + + P V L+S K VRKKA+ + K +V + L
Sbjct: 146 VCRLINEETIPAVLPLVVELLSHGKEAVRKKAVMALHSFHRKSSSSVSHLVANFRKRLCD 205
Query: 193 TDQQIASAVIGVFCELASKDPRSYLPLAPEFYRVLVDSRNNWVLIKVLKIFAKLAPL--- 249
D + A + +L + DP Y L F +L + L K AP
Sbjct: 206 NDPGVMGATLCPLFDLITDDPNPYKDLVVSFVSILKQVAEHR-LPKSYDYHQMPAPFVQI 264
Query: 250 ------------EPRLAKRVVEPICDIMRRTGAKS-----LMFECIRTVATSFTDYESAV 292
+ ++ + I DI+R+ + S +++E IR V++ + + +
Sbjct: 265 KLLKILALLGSGDKSSSEHMYTVIGDIIRKGDSSSNIGNAILYESIRCVSSIYPN-PKLL 323
Query: 293 ELAVAKNGEFLTDDDPNLKYLGLHVLS-------IIAPKHLWAVL--------------- 330
E A +FL D NLKY+G+ L +IA +H AV+
Sbjct: 324 EAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPLIAEQHQLAVIDCLETNVSIRLAHPK 383
Query: 331 ---QNKEVVIMSLSDADPNIKLESLRLVMAMVSESNVVEFCRVLVNYSLK-SDPEFCNEI 386
NK ++ + D D +K ++ L+ M SNV ++ Y + SD +
Sbjct: 384 LCSTNKNLIFWMVQDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIEYMISISDDHYKT-- 441
Query: 387 LGSILSRCRQNFYEIIVDFDWYVSLLGEISRIPHCQKGEEIENQLIDIGMRVKDVRLPLV 446
I SRC + + W++ + ++ E L++I + +RL
Sbjct: 442 --YIASRCVELAEQFAPSNHWFIQTMNKVF---------EHAGDLVNIKVAHNLMRLIAE 490
Query: 447 HVGRDLLIDPA---------------LLGNPFLHRI-LSAAAWVCGEY 478
G D D A ++G P L + L WV GEY
Sbjct: 491 GFGED---DDAAYSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEY 535
>IMGA|Medtr8g072250.2 AP-4 complex subunit epsilon-1 (AHRD V1 ***-
Q9UPM8); contains Interpro domain(s) IPR011989
Armadillo-like helical chr08_pseudomolecule_IMGAG_V3.5
18898759-18909271 E EGN_Mt100125 20100825
Length = 610
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 209/528 (39%), Gaps = 85/528 (16%)
Query: 17 DIIK--GLRHQQTGESAFISKVMEEIRREIKSTDLHTKSIALH--KLTYLNSIHFIDISW 72
D+IK G + E + + +E ++R I D+ + + + +L Y+ + D S+
Sbjct: 27 DLIKSIGESRSKAEEDRIVIREIETLKRRISEPDIPKRKMKEYIIRLLYVEMLGH-DASF 85
Query: 73 AAFHAIECISSPNFSHKKIGYLAISQSFNESTPVILLITNQLRKDLRSNNEFEVSLALEC 132
HA++ N K+ GYLA++ N+ +I+LI N ++KDL+S+N V AL
Sbjct: 86 GYIHAVKMTHDDNLPSKRTGYLAVTLFLNDDHDLIILIVNTIQKDLKSDNYLVVCAALNA 145
Query: 133 LSTIGTVDLCRDLTPEVFTLMSSSKLLVRKKALGVILRVFGKYPDAVRVCFKRLVECLDG 192
+ + + + P V L+S K VRKKA+ + K +V + L
Sbjct: 146 VCRLINEETIPAVLPLVVELLSHGKEAVRKKAVMALHSFHRKSSSSVSHLVANFRKRLCD 205
Query: 193 TDQQIASAVIGVFCELASKDPRSYLPLAPEFYRVLVDSRNNWVLIKVLKIFAKLAPL--- 249
D + A + +L + DP Y L F +L + L K AP
Sbjct: 206 NDPGVMGATLCPLFDLITDDPNPYKDLVVSFVSILKQVAEHR-LPKSYDYHQMPAPFVQI 264
Query: 250 ------------EPRLAKRVVEPICDIMRRTGAKS-----LMFECIRTVATSFTDYESAV 292
+ ++ + I DI+R+ + S +++E IR V++ + + +
Sbjct: 265 KLLKILALLGSGDKSSSEHMYTVIGDIIRKGDSSSNIGNAILYESIRCVSSIYPN-PKLL 323
Query: 293 ELAVAKNGEFLTDDDPNLKYLGLHVLS-------IIAPKHLWAVL--------------- 330
E A +FL D NLKY+G+ L +IA +H AV+
Sbjct: 324 EAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPLIAEQHQLAVIDCLETNVSIRLAHPK 383
Query: 331 ---QNKEVVIMSLSDADPNIKLESLRLVMAMVSESNVVEFCRVLVNYSLK-SDPEFCNEI 386
NK ++ + D D +K ++ L+ M SNV ++ Y + SD +
Sbjct: 384 LCSTNKNLIFWMVQDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIEYMISISDDHYKT-- 441
Query: 387 LGSILSRCRQNFYEIIVDFDWYVSLLGEISRIPHCQKGEEIENQLIDIGMRVKDVRLPLV 446
I SRC + + W++ + ++ E L++I + +RL
Sbjct: 442 --YIASRCVELAEQFAPSNHWFIQTMNKVF---------EHAGDLVNIKVAHNLMRLIAE 490
Query: 447 HVGRDLLIDPA---------------LLGNPFLHRI-LSAAAWVCGEY 478
G D D A ++G P L + L WV GEY
Sbjct: 491 GFGED---DDAAYSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEY 535