Jatropha Genome Database

Jcr4S05943.40
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4S05943.40
         (228 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29747.m001101 calmodulin binding protein, putative                    214   3e-56
30128.m008886 conserved hypothetical protein                           58   3e-09

>29747.m001101 calmodulin binding protein, putative
          Length = 412

 Score =  214 bits (545), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 110/186 (59%), Positives = 142/186 (76%), Gaps = 9/186 (4%)

Query: 43  KLRRILGAGMSEKIWEATIKHARTCELGNKHYIFRGQNCTVTLNPICQVVNAIIDGHTYS 102
           +L+ IL  GMSEK+WE T+KHARTCE+GNKHYIFRGQ+CTVTLNPICQV++A I+G TYS
Sbjct: 234 RLQLILDNGMSEKMWEVTMKHARTCEMGNKHYIFRGQSCTVTLNPICQVLSATINGQTYS 293

Query: 103 TRDLPTINRGYIASLVRQAYANWNSLQEIVGVSSEMALLTLGEQAVNEYPSHHLQAMIKP 162
           TRDLP+I RGYI +LVRQAYANW+SL+ +VGV +E++LLT GEQ V++YP+HH QAM+K 
Sbjct: 294 TRDLPSI-RGYIENLVRQAYANWSSLEVVVGVPNEISLLTQGEQLVDQYPNHHYQAMVKS 352

Query: 163 IHEIGYSSDDRYTDMGTQLNTSSTANMMGYNNWHNMAAPISPTIG--YSISESSSDGELT 220
            H+I Y+++  + +      T++T   MGY NW + A  +SP I        SS+  ELT
Sbjct: 353 YHQIEYTTERYFEN-----QTNATNAHMGYINWQH-APSVSPGIRRYSISESSSNSSELT 406

Query: 221 PRSYIN 226
           PRSYIN
Sbjct: 407 PRSYIN 412


>30128.m008886 conserved hypothetical protein
          Length = 514

 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 34/45 (75%)

Query: 2   LEDEVWRLEKIGKDGAFHKKLNSDGINTVQDFLKLSIVDSQKLRR 46
           L+DEVWRLE+I KDG+ HKKL   GI TV+DFL+   V+  +LRR
Sbjct: 249 LDDEVWRLERIAKDGSSHKKLAELGIRTVRDFLQRYAVNPPELRR 293