Jatropha Genome Database

Jcr4S05837.20
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4S05837.20
         (157 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29996.m000135 conserved hypothetical protein                          160   2e-40
29914.m000203 conserved hypothetical protein                          144   1e-35

>29996.m000135 conserved hypothetical protein
          Length = 148

 Score =  160 bits (406), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 80/114 (70%), Positives = 88/114 (77%), Gaps = 2/114 (1%)

Query: 1   MRPNWELKNCCNHEQXXXXXXXXXXXXXILALWRTVLLTPFKLVTVFLHEASHAIACKLT 60
           MRPNWEL  CCNHEQ             ILALWRTVLLTPFKLVTVFLHEASHAIACKLT
Sbjct: 1   MRPNWELNKCCNHEQVVFLVTVSVCSVVILALWRTVLLTPFKLVTVFLHEASHAIACKLT 60

Query: 61  CGHVEGIQVHADEGGTTQTRGGVYWFILPAGCVMNSLFSVYDIY--DDLISRRV 112
           CGHVEGIQVHADEGGTTQTRGGVYWFILPAG + +S + +  I    +L++ R+
Sbjct: 61  CGHVEGIQVHADEGGTTQTRGGVYWFILPAGYLGSSFWGMVLILASTNLLTARI 114


>29914.m000203 conserved hypothetical protein
          Length = 221

 Score =  144 bits (364), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 69/114 (60%), Positives = 84/114 (73%), Gaps = 2/114 (1%)

Query: 3   PNWELKNCCNHEQXXXXXXXXXXXXXILALWRTVLLTPFKLVTVFLHEASHAIACKLTCG 62
           PNWELKNCC H+Q             ILALWRT+L+TPFKL+TVFLHEASHA+ACKLTCG
Sbjct: 2   PNWELKNCCQHDQVVFLVTIGVFSLVILALWRTILMTPFKLITVFLHEASHAVACKLTCG 61

Query: 63  HVEGIQVHADEGGTTQTRGGVYWFILPAGCVMNSLFSVYDIY--DDLISRRVHS 114
            VEGIQVHA+EGG TQTRGG+YW ILPAG + +S + +  I    +L + R+ +
Sbjct: 62  DVEGIQVHANEGGVTQTRGGIYWVILPAGYLGSSFWGMALILASTNLTTARIAA 115



 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 41/45 (91%), Positives = 44/45 (97%)

Query: 93  VMNSLFSVYDIYDDLISRRVHSSDAEKFAEVCPCPCNGMGWGMIW 137
           VMNSLFSVYDIYDDLISRRVHSSDAEKFAE+CPCPC G+GWG+IW
Sbjct: 169 VMNSLFSVYDIYDDLISRRVHSSDAEKFAELCPCPCTGVGWGVIW 213