Jatropha Genome Database

Jcr4S03834.30
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4S03834.30
         (347 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32500.1 | Symbols: ATNAP6, NAP6 | non-intrinsic ABC protein ...   451   e-127
AT4G04770.1 | Symbols: ATABC1, LAF6, ATNAP1, ABC1 | ATP binding ...    72   6e-13
AT5G44316.1 | Symbols:  | Stabilizer of iron transporter SufD su...    53   3e-07

>AT1G32500.1 | Symbols: ATNAP6, NAP6 | non-intrinsic ABC protein 6 |
           chr1:11750091-11751994 REVERSE LENGTH=475
          Length = 475

 Score =  451 bits (1159), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 214/334 (64%), Positives = 262/334 (78%), Gaps = 2/334 (0%)

Query: 6   NLPDGVYVGSLLSDSNDKIAKIVSNFVDDFQCGDVFWSINGLGAPDLAVVYIPAGVRVES 65
           +LPDGVY G   S   D++   +S F+ +F  GD+FWSING+GAPDL V+Y+P G +VE+
Sbjct: 144 DLPDGVYFGKY-SGLPDELTNRISEFIGNFDSGDLFWSINGMGAPDLMVIYVPEGCKVEN 202

Query: 66  PIHLRYVSLEGGEEGSNKLPVSNPRXXXXXXXXXXXXXXXXXXXXXSDDKCYWANSVLQV 125
           PI+LRY S E G+  S +LPVSNPR                      ++  YW N VL+V
Sbjct: 203 PIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEIGIVEEFVGK-DEEGFYWTNPVLEV 261

Query: 126 IIEEGSKVKHSYIQSQSLNSAHIKWTYVQQKSSSTYELVEVSTGGKLSRHNLHVQQLGPD 185
           ++++ +K+KHSY+Q +S+ SAHIKWT+V+Q++ S YELVEVSTGGKL RHN+HVQQLGPD
Sbjct: 262 VVQKNAKLKHSYLQKESMASAHIKWTFVRQEAESEYELVEVSTGGKLGRHNVHVQQLGPD 321

Query: 186 TSTELSTFHLSVDGQTQDLHSRLVLDHPRAYSRQLHKCIVAHSLGQAVFDGNIKVNRYAQ 245
           T TEL+TFH+ V+ QT DLHS+++LDHPR  SRQLHKCIVAHS GQAVFDGN++VNR+AQ
Sbjct: 322 TLTELTTFHMCVNEQTLDLHSKIILDHPRGASRQLHKCIVAHSSGQAVFDGNVRVNRFAQ 381

Query: 246 QTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLET 305
           QT+AGQLTRSLLL+PRATVN+KPNLQIIADDVKCSHGAAISDLEE QLFYFQARGIDLET
Sbjct: 382 QTNAGQLTRSLLLKPRATVNIKPNLQIIADDVKCSHGAAISDLEEDQLFYFQARGIDLET 441

Query: 306 ARKALVFSFGAEVIERCPYSFIRQQAERHVKELL 339
           AR+AL+ SFG+EVIE+ P   IR QA  HVK LL
Sbjct: 442 ARRALISSFGSEVIEKFPNREIRDQARNHVKGLL 475


>AT4G04770.1 | Symbols: ATABC1, LAF6, ATNAP1, ABC1 | ATP binding
           cassette protein 1 | chr4:2427998-2429785 REVERSE
           LENGTH=557
          Length = 557

 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 11/215 (5%)

Query: 121 SVLQVIIEEGSKVKHSYIQSQSLNSAHIK---WTYVQQKS-----SSTYELVEVSTGGKL 172
           +V+++   +G+++K+S +Q+        K   + +V ++       S     +V TG  +
Sbjct: 328 AVVELYCGKGAEIKYSTVQNWYAGDEQGKGGIYNFVTKRGLCAGDRSKISWTQVETGSAI 387

Query: 173 SRHNLHVQQLGPDTSTELSTFHLSVDGQTQDLHSRLVLDHPRAYSRQLHKCIVA-HSLGQ 231
           +     V   G D+  E  +  L+ + Q  D  ++++       SR + K I A HS  +
Sbjct: 388 TWKYPSVVLEGDDSVGEFYSVALTNNYQQADTGTKMIHKGKNTKSRIISKGISAGHS--R 445

Query: 232 AVFDGNIKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 291
             + G ++V   A+         S+L+  +A  N  P +Q+     K  H A+ S + E 
Sbjct: 446 NCYRGLVQVQSKAEGAKNTSTCDSMLIGDKAAANTYPYIQVKNPSAKVEHEASTSKIGED 505

Query: 292 QLFYFQARGIDLETARKALVFSFGAEVIERCPYSF 326
           QLFYFQ RGID E A  A++  F  +V  + P  F
Sbjct: 506 QLFYFQQRGIDHERALAAMISGFCRDVFNKLPDEF 540


>AT5G44316.1 | Symbols:  | Stabilizer of iron transporter SufD
           superfamily protein | chr5:17852911-17854521 FORWARD
           LENGTH=470
          Length = 470

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 5/92 (5%)

Query: 255 SLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSF 314
           S+L+   A  N  P +Q+     +  H A+ S + E Q+FYFQ RGID E A  A++  F
Sbjct: 382 SMLIGDNAAANTYPYIQVKNPSARIEHEASTSKIGEDQIFYFQQRGIDHERALAAMISGF 441

Query: 315 GAEVIERCPYSFIRQQAERHVKELLTSSGQGS 346
             +V  + P  F  +     V +LL+   +GS
Sbjct: 442 CRDVFNKLPNEFGAE-----VNQLLSIKLEGS 468