Jatropha Genome Database

Jcr4S03834.30
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4S03834.30
         (347 letters)

Database: Medicago_aa3.5 
           47,529 sequences; 14,043,872 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g014290.1 Protein ABCI7, chloroplastic (AHRD V1 ***- ...   462   e-131
IMGA|Medtr7g030030.1 ATP-binding cassette transporter subfamily ...    74   2e-13
IMGA|Medtr5g013090.1 Protein ABCI7, chloroplastic (AHRD V1 ***- ...    52   5e-07

>IMGA|Medtr5g014290.1 Protein ABCI7, chloroplastic (AHRD V1 ***-
           Q9LQK7); contains Interpro domain(s)  IPR011542  SUF
           system FeS cluster assembly, SufD
           chr05_pseudomolecule_IMGAG_V3.5 4514302-4510076 E
           EGN_Mt100125 20100825
          Length = 474

 Score =  462 bits (1190), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 226/334 (67%), Positives = 265/334 (79%), Gaps = 3/334 (0%)

Query: 9   DGVYVGSLLSDSNDKIAKIVSNFVDDFQCGDVFWSINGLGAPDLAVVYIPAGVRVESPIH 68
           DGVYVG+L S  N  +AK V   V     GD+FWSING+GAPDL VVY+P GVRVE+P+H
Sbjct: 142 DGVYVGNL-SKLNGVVAKRVLELVSGLDGGDLFWSINGMGAPDLTVVYVPEGVRVETPVH 200

Query: 69  LRYVSLEGGEEGSNKLPVSNPRXXXXXXXXXXXXXXXXXXXXXSDDKCYWANSVLQVIIE 128
           L YVSL+G +EG N+L +SNPR                     ++++CYW+N+VL+V+I 
Sbjct: 201 LGYVSLQGSKEGGNELYLSNPRVLVVVEKGGEVDIVEEFEG--NENECYWSNAVLEVVIG 258

Query: 129 EGSKVKHSYIQSQSLNSAHIKWTYVQQKSSSTYELVEVSTGGKLSRHNLHVQQLGPDTST 188
           EG KV+HSY+Q+QS+ +AHIKWT V+Q+SSSTYEL EVSTGGKL RHNLH++QLGPDT T
Sbjct: 259 EGGKVRHSYVQTQSMLAAHIKWTSVRQESSSTYELTEVSTGGKLGRHNLHIKQLGPDTVT 318

Query: 189 ELSTFHLSVDGQTQDLHSRLVLDHPRAYSRQLHKCIVAHSLGQAVFDGNIKVNRYAQQTD 248
           ELST HLSV  QTQDLHS LVLDHPR YSRQ+HKCIVAHS GQAVFDGN+KVNRYAQQTD
Sbjct: 319 ELSTLHLSVGNQTQDLHSSLVLDHPRGYSRQIHKCIVAHSQGQAVFDGNVKVNRYAQQTD 378

Query: 249 AGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARK 308
           AGQL+RSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE+SQL YFQARGID ETAR+
Sbjct: 379 AGQLSRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEQSQLLYFQARGIDSETARR 438

Query: 309 ALVFSFGAEVIERCPYSFIRQQAERHVKELLTSS 342
            L+F+FG EVI++ P S IR +    +K LL  S
Sbjct: 439 VLIFAFGGEVIDKFPNSSIRDRVRSQIKSLLDPS 472


>IMGA|Medtr7g030030.1 ATP-binding cassette transporter subfamily I
           member 15 ABC component protein PpABCI15 (Fragment)
           (AHRD V1 **** A9RAW0_PHYPA); contains Interpro domain(s)
            IPR010231  SUF system FeS cluster assembly, SufB
           chr07_pseudomolecule_IMGAG_V3.5 8595894-8592686 E
           EGN_Mt100125 20100825
          Length = 547

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 127/299 (42%), Gaps = 23/299 (7%)

Query: 39  DVFWSINGLGAPDLAVVYIPAGVRVESPI--HLRYVSLEGGEEGSNKLPVSNPRXXXXXX 96
           + + ++N     D +  YIP GV+    I  + R  +LE G+     L V++ R      
Sbjct: 244 NYYAALNAAVFSDGSFCYIPKGVKCPMQISTYFRINALETGQ-FERTLIVADDRSMVEYL 302

Query: 97  XXXXXXXXXXXXXXXSDDKCYWANSVLQVIIEEGSKVKHSYIQSQSLNSAHIK---WTYV 153
                          S DK     +V+++   EG+++K+S +Q+      + K   + +V
Sbjct: 303 EGCTAP---------SYDKNQLHAAVVELYCGEGAEIKYSTVQNWYAGDENGKGGIYNFV 353

Query: 154 QQK-----SSSTYELVEVSTGGKLSRHNLHVQQLGPDTSTELSTFHLSVDGQTQDLHSRL 208
            ++       S     +V TG  ++     V   G ++  E  +  L+ + Q  D  +++
Sbjct: 354 TKRGLCAGKKSKISWTQVETGSAITWKYPSVVLEGDESVGEFYSVALTNNYQQADTGTKM 413

Query: 209 VLDHPRAYSRQLHKCIVA-HSLGQAVFDGNIKVNRYAQQTDAGQLTRSLLLEPRATVNVK 267
           +       SR + K I A HS  +  + G ++V   A+         S+L+   A  N  
Sbjct: 414 IHKGKNTKSRIISKGISAGHS--RNCYRGLVQVQSKAENAKNSSQCDSMLIGDSAAANTY 471

Query: 268 PNLQIIADDVKCSHGAAISDLEESQLFYFQARGIDLETARKALVFSFGAEVIERCPYSF 326
           P +Q+     +  H A+ S + E QLFYFQ RGID E A  A++  F  +V    P  F
Sbjct: 472 PYIQVKNPSARIEHEASTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEF 530


>IMGA|Medtr5g013090.1 Protein ABCI7, chloroplastic (AHRD V1 ***-
           Q9LQK7) chr05_pseudomolecule_IMGAG_V3.5 3854418-3854919
           H EGN_Mt100125 20100825
          Length = 54

 Score = 52.0 bits (123), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 2/40 (5%)

Query: 156 KSSSTYELVEVSTGGKLSRHN--LHVQQLGPDTSTELSTF 193
           +SSSTYEL EVS+GGKL RHN  LH++QLG DT T+  +F
Sbjct: 6   ESSSTYELTEVSSGGKLGRHNLHLHIKQLGSDTVTDSFSF 45