Jatropha Genome Database
- Jcr4S03834.30
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jcr4S03834.30
(1044 letters)
Database: JAT_unigene
122,497 sequences; 49,272,789 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
contig11896 length=1148 numreads=17 gene=isogroup06805 statu... 940 0.0
tissues_GDVQYP002I3456 527 e-149
seed_E0K9Y9A01DCVYP 424 e-118
tissues_GDVQYP002IGMTY 268 9e-71
tissues_GDVQYP002GDWSE 190 2e-47
tissues_GDVQYP002I8X3P 151 2e-35
>contig11896 length=1148 numreads=17 gene=isogroup06805
status=isotig
Length = 1148
Score = 940 bits (474), Expect = 0.0
Identities = 474/474 (100%)
Strand = Plus / Plus
Query: 1 atgttgaattcgcccaatttgcctgatggggtttatgtgggtagcttgttaagtgactcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 atgttgaattcgcccaatttgcctgatggggtttatgtgggtagcttgttaagtgactcc 734
Query: 61 aatgataaaattgccaaaattgtgtccaattttgttgatgattttcaatgtggtgatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aatgataaaattgccaaaattgtgtccaattttgttgatgattttcaatgtggtgatgtg 794
Query: 121 ttttggtctattaatggattaggagcacctgatttggctgtggtttatattcctgctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ttttggtctattaatggattaggagcacctgatttggctgtggtttatattcctgctggg 854
Query: 181 gttagagtggaaagtccaatacatttgcgttacgtttctctcgagggaggagaagagggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 gttagagtggaaagtccaatacatttgcgttacgtttctctcgagggaggagaagagggg 914
Query: 241 tctaataagttgcccgtttcaaatccaagagtgcttgtagtggtggaggagggcggagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 tctaataagttgcccgtttcaaatccaagagtgcttgtagtggtggaggagggcggagag 974
Query: 301 gttgggataattgaggagtttgttagtgtaggaagtgatgacaaatgttattgggcaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 gttgggataattgaggagtttgttagtgtaggaagtgatgacaaatgttattgggcaaat 1034
Query: 361 tcagttttgcaagtcattattgaagaaggatcaaaagttaagcattcttatatacagagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 tcagttttgcaagtcattattgaagaaggatcaaaagttaagcattcttatatacagagt 1094
Query: 421 caatccttaaattctgcccatatcaagtggacttatgttcaacagaaatcaagt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 caatccttaaattctgcccatatcaagtggacttatgttcaacagaaatcaagt 1148
>tissues_GDVQYP002I3456
Length = 371
Score = 527 bits (266), Expect = e-149
Identities = 273/274 (99%), Gaps = 1/274 (0%)
Strand = Plus / Plus
Query: 723 cagatatgcacaacaaactgatgctggacaattaacgaggagcctccttctggaaccacg 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 cagatatgcacaacaaactgatgctggacaattaacgaggagcctccttctggaaccacg 157
Query: 783 agcaactgtaaatgtcaaacccaatttgcaaataatagcagatgatgtcaaatgctccca 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 agcaactgtaaatgtcaaacccaatttgcaaataatagcagatgatgtcaaatgctccca 217
Query: 843 cggagctgcaataagcgatctagaagaaagccagctgttctactttcaggcacgtggtat 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 cggagctgcaataagcgatctagaagaaagccagctgttctactttcaggcacgtggtat 277
Query: 903 tgatttagagacggctagaaaggctcttgtattttccttcggggctgaagtgattgaacg 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tgatttagagacggctagaaaggctcttgtattttccttcggggctgaagtgattgaacg 337
Query: 963 atg-cccttattcttttattagacagcaagctga 995
||| ||||||||||||||||||||||||||||||
Sbjct: 338 atgtcccttattcttttattagacagcaagctga 371
>seed_E0K9Y9A01DCVYP
Length = 248
Score = 424 bits (214), Expect = e-118
Identities = 217/218 (99%)
Strand = Plus / Plus
Query: 827 atgtcaaatgctcccacggagctgcaataagcgatctagaagaaagccagctgttctact 886
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 atgtcaaatgctcccacggagctgcagtaagcgatctagaagaaagccagctgttctact 60
Query: 887 ttcaggcacgtggtattgatttagagacggctagaaaggctcttgtattttccttcgggg 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcaggcacgtggtattgatttagagacggctagaaaggctcttgtattttccttcgggg 120
Query: 947 ctgaagtgattgaacgatgcccttattcttttattagacagcaagctgagagacatgtga 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgaagtgattgaacgatgcccttattcttttattagacagcaagctgagagacatgtga 180
Query: 1007 aagaattgctaacttcctctggtcaaggatcgtcatag 1044
||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagaattgctaacttcctctggtcaaggatcgtcatag 218
>tissues_GDVQYP002IGMTY
Length = 377
Score = 268 bits (135), Expect = 9e-71
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 591 tgatggtcaaacacaagatctacatagtaggcttgtcttggatcatccaagggcttattc 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatggtcaaacacaagatctacatagtaggcttgtcttggatcatccaagggcttattc 60
Query: 651 tcgacaacttcacaagtgcatagttgctcattcactaggccaagctgtctttgatgggaa 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgacaacttcacaagtgcatagttgctcattcactaggccaagctgtctttgatgggaa 120
Query: 711 tataaaggtcaacag 725
|||||||||||||||
Sbjct: 121 tataaaggtcaacag 135
>tissues_GDVQYP002GDWSE
Length = 368
Score = 190 bits (96), Expect = 2e-47
Identities = 113/116 (97%), Gaps = 2/116 (1%)
Strand = Plus / Plus
Query: 723 cagatatgcacaacaaactgatgctggacaattaacgaggagcctccttctggaaccacg 782
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 255 cagatatgcacaacaaactgatgctggacaattaacgatgagcctccttctggaaccacg 314
Query: 783 agcaactgtaaatgtcaaacccaatttgcaaataatagcagatgatgtcaaatgct 838
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 315 agcaactgtaaatgtcaaaccc-atttgcaaat-atagcagatgatgtcaaatgct 368
>tissues_GDVQYP002I8X3P
Length = 388
Score = 151 bits (76), Expect = 2e-35
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 723 cagatatgcacaacaaactgatgctggacaattaacgaggagcctccttctggaaccacg 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 cagatatgcacaacaaactgatgctggacaattaacgaggagcctccttctggaaccacg 17
Query: 783 agcaactgtaaatgtc 798
||||||||||||||||
Sbjct: 16 agcaactgtaaatgtc 1