Jatropha Genome Database

Jcr4S03834.30
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4S03834.30
         (347 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g04560.1                                                       420   e-117
Glyma01g40770.1                                                       299   3e-81
Glyma11g04560.2                                                       258   7e-69
Glyma18g37710.1                                                       123   4e-28
Glyma13g23260.1                                                        69   7e-12
Glyma17g11570.1                                                        69   1e-11

>Glyma11g04560.1 
          Length = 456

 Score =  420 bits (1080), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 211/340 (62%), Positives = 254/340 (74%), Gaps = 4/340 (1%)

Query: 6   NLPDGVYVGSLLSDSNDKIAKIVSNFVDDFQCGDVFWSINGLGAPDLAVVYIPAGVRVES 65
           +LP+ VYVGSL S S   + + VS+F+  F  GD+F+SING+ APDL +VY+P G  V+ 
Sbjct: 116 HLPNDVYVGSLSSSSPSLLQR-VSHFICPFPIGDLFFSINGIAAPDLTLVYVPEGCHVDI 174

Query: 66  PIHLRYV--SLEGGEEGSNKLPVSNPRXXXXXXXXXXXXXXXXXXXXXSD-DKCYWANSV 122
           PIHL Y+       ++    + +SNPR                      + +  YW+N+ 
Sbjct: 175 PIHLDYMLPPTPSTDDSDAAMHLSNPRVLVVVEKGAHVNIIEDFPASPENQNDSYWSNAA 234

Query: 123 LQVIIEEGSKVKHSYIQSQSLNSAHIKWTYVQQKSSSTYELVEVSTGGKLSRHNLHVQQL 182
            + +I +G+K+ HSYIQ+QS  +AHIKWT ++Q++SSTYEL EVSTGGKL RHNLH+QQL
Sbjct: 235 FEAVIGQGAKLTHSYIQTQSFRAAHIKWTSIRQEASSTYELTEVSTGGKLGRHNLHIQQL 294

Query: 183 GPDTSTELSTFHLSVDGQTQDLHSRLVLDHPRAYSRQLHKCIVAHSLGQAVFDGNIKVNR 242
           GPDT TELST HLSV  QTQDLHS LVLDHPR YSRQLHKCIV HS GQAVFDGNIKVNR
Sbjct: 295 GPDTVTELSTLHLSVADQTQDLHSTLVLDHPRGYSRQLHKCIVTHSQGQAVFDGNIKVNR 354

Query: 243 YAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGID 302
           YAQQTDAGQLTR+LLLEPRATVNVKPNLQI+ADDVKCSHGAAISDLEESQL YFQARGID
Sbjct: 355 YAQQTDAGQLTRTLLLEPRATVNVKPNLQIVADDVKCSHGAAISDLEESQLLYFQARGID 414

Query: 303 LETARKALVFSFGAEVIERCPYSFIRQQAERHVKELLTSS 342
           +ETAR+ LVF+FG+EVI++ PYS IR +    +K LL  S
Sbjct: 415 IETARRVLVFAFGSEVIDKFPYSSIRDRVRSQIKNLLDPS 454


>Glyma01g40770.1 
          Length = 303

 Score =  299 bits (765), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 168/310 (54%), Positives = 196/310 (63%), Gaps = 27/310 (8%)

Query: 35  FQCGDVFWSINGLGAPDLAVVYIPAGVRVESPIHLRYVSLEGGEEGSNKLPVSNPRXXXX 94
           F  GD+FWSING+ APDL +VYIP G  V+ PIHL Y  +      ++ + +SNPR    
Sbjct: 17  FPNGDLFWSINGIAAPDLTLVYIPEGCHVDIPIHLDY--MHPPNTTTDAMQLSNPRFLVV 74

Query: 95  XXX-XXXXXXXXXXXXXXSDDKCYWANSVLQVIIEEGSKVKHSYIQSQSLNSAHIKWTYV 153
                                         + +I EG+K+ HSYIQ+QS         ++
Sbjct: 75  VEKGAQANIIEEFSALKIMKMTLIGVMPAFEAVIGEGAKLTHSYIQTQS---------FL 125

Query: 154 QQKSSSTYELVEVSTGGKLSRHNLHVQQLGPDTSTELSTFHLSVDGQTQDLHSRLVLDHP 213
           Q + S TYEL EVSTGGKL R NLH+QQLGPDT TELST HLSV  QTQDLHS LVLDHP
Sbjct: 126 QLEDSITYELTEVSTGGKLGRCNLHIQQLGPDTVTELSTLHLSVGDQTQDLHSTLVLDHP 185

Query: 214 RAYSRQLHKCIVAHSLGQAVFDGNIKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQII 273
           R YSRQLHKCIV HS GQAVFDGNIKVNRYAQQTDAGQLTRSLLLEP ATVNVK NLQI+
Sbjct: 186 RGYSRQLHKCIVTHSQGQAVFDGNIKVNRYAQQTDAGQLTRSLLLEPCATVNVKLNLQIV 245

Query: 274 ADDVKCSHGAAISDLEESQLFYFQARGIDL-ETARKALVFSFGAEVIERCPYSFIRQQAE 332
           ADD K    + IS            + + L ETAR+ LVF+FG EVI++ PYS IR +  
Sbjct: 246 ADDKK--FNSCIS------------KHVALTETARRVLVFAFGREVIDKFPYSSIRDRVG 291

Query: 333 RHVKELLTSS 342
             +K LL  S
Sbjct: 292 SQIKNLLDPS 301


>Glyma11g04560.2 
          Length = 354

 Score =  258 bits (659), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 133/240 (55%), Positives = 166/240 (69%), Gaps = 4/240 (1%)

Query: 6   NLPDGVYVGSLLSDSNDKIAKIVSNFVDDFQCGDVFWSINGLGAPDLAVVYIPAGVRVES 65
           +LP+ VYVGSL S S   + + VS+F+  F  GD+F+SING+ APDL +VY+P G  V+ 
Sbjct: 116 HLPNDVYVGSLSSSSPSLLQR-VSHFICPFPIGDLFFSINGIAAPDLTLVYVPEGCHVDI 174

Query: 66  PIHLRYV--SLEGGEEGSNKLPVSNPRXXXXXXXXXXXXXXXXXXXXXSD-DKCYWANSV 122
           PIHL Y+       ++    + +SNPR                      + +  YW+N+ 
Sbjct: 175 PIHLDYMLPPTPSTDDSDAAMHLSNPRVLVVVEKGAHVNIIEDFPASPENQNDSYWSNAA 234

Query: 123 LQVIIEEGSKVKHSYIQSQSLNSAHIKWTYVQQKSSSTYELVEVSTGGKLSRHNLHVQQL 182
            + +I +G+K+ HSYIQ+QS  +AHIKWT ++Q++SSTYEL EVSTGGKL RHNLH+QQL
Sbjct: 235 FEAVIGQGAKLTHSYIQTQSFRAAHIKWTSIRQEASSTYELTEVSTGGKLGRHNLHIQQL 294

Query: 183 GPDTSTELSTFHLSVDGQTQDLHSRLVLDHPRAYSRQLHKCIVAHSLGQAVFDGNIKVNR 242
           GPDT TELST HLSV  QTQDLHS LVLDHPR YSRQLHKCIV HS GQAVFDGNIKVNR
Sbjct: 295 GPDTVTELSTLHLSVADQTQDLHSTLVLDHPRGYSRQLHKCIVTHSQGQAVFDGNIKVNR 354


>Glyma18g37710.1 
          Length = 97

 Score =  123 bits (308), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 61/95 (64%), Positives = 70/95 (73%), Gaps = 13/95 (13%)

Query: 242 RYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEESQLFYFQARGI 301
           RYAQQTDAGQLTRSLLLE RA VN             CSHGAAISDLEES+L YFQARGI
Sbjct: 14  RYAQQTDAGQLTRSLLLERRAIVN-------------CSHGAAISDLEESELLYFQARGI 60

Query: 302 DLETARKALVFSFGAEVIERCPYSFIRQQAERHVK 336
           D+ET ++ LVFSFG EVI++ PYSF+R +    +K
Sbjct: 61  DIETTKRVLVFSFGGEVIDKFPYSFVRDRFRSQIK 95


>Glyma13g23260.1 
          Length = 544

 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 11/215 (5%)

Query: 121 SVLQVIIEEGSKVKHSYIQSQSLNSAHIK---WTYVQQK-----SSSTYELVEVSTGGKL 172
           +V+++   EG+++K+S +Q+        K   + +V ++     + S     +V TG  +
Sbjct: 315 AVVELYCGEGAEIKYSTVQNWYAGDEEGKGGVYNFVTKRGLCAGAGSKISWTQVETGSAI 374

Query: 173 SRHNLHVQQLGPDTSTELSTFHLSVDGQTQDLHSRLVLDHPRAYSRQLHKCI-VAHSLGQ 231
           +     V   G  +  E  +  L+ + Q  D  ++++       SR + K I V HS  +
Sbjct: 375 TWKYPSVVLEGDGSVGEFYSVALTNNYQQADTGTKMIHKGKNTRSRIISKGISVGHS--R 432

Query: 232 AVFDGNIKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 291
             + G ++V   A+         S+L+   A  N  P +Q+     +  H A+ S + E 
Sbjct: 433 NCYRGLVQVLSKAENARNSSQCDSMLIGDNAAANTYPYIQVKNPTARIEHEASTSKIGED 492

Query: 292 QLFYFQARGIDLETARKALVFSFGAEVIERCPYSF 326
           QLFYFQ RGID E A  A++  F  +V    P  F
Sbjct: 493 QLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEF 527


>Glyma17g11570.1 
          Length = 530

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 11/215 (5%)

Query: 121 SVLQVIIEEGSKVKHSYIQSQSLNSAHIK---WTYVQQK-----SSSTYELVEVSTGGKL 172
           +V+++   EG+++K+S +Q+        K   + +V ++     + S     +V TG  +
Sbjct: 301 AVVELYCGEGAEIKYSTVQNWYAGDEEGKGGVYNFVTKRGLCGGAGSKISWTQVETGSAI 360

Query: 173 SRHNLHVQQLGPDTSTELSTFHLSVDGQTQDLHSRLVLDHPRAYSRQLHKCI-VAHSLGQ 231
           +     V   G  +  E  +  L+ + Q  D  ++++       SR + K I V HS  +
Sbjct: 361 TWKYPSVVLEGDGSVGEFYSVALTNNYQQADTGTKMIHKGKNTRSRIISKGISVGHS--R 418

Query: 232 AVFDGNIKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEES 291
             + G ++V   A          S+L+   A  N  P +Q+     +  H A+ S + E 
Sbjct: 419 NCYRGLVQVLSKADNARNSSQCDSMLIGDNAAANTYPYIQVKNPTARIEHEASTSKIGED 478

Query: 292 QLFYFQARGIDLETARKALVFSFGAEVIERCPYSF 326
           QLFYFQ RGID E A  A++  F  +V    P  F
Sbjct: 479 QLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEF 513