Jatropha Genome Database

Jcr4S00006.260
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jcr4S00006.260 /short
         (225 letters)

Database: JAT_unigene 
           122,497 sequences; 49,272,789 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

contig08734  length=1956  numreads=50  gene=isogroup03643  statu...   446   e-125

>contig08734  length=1956  numreads=50  gene=isogroup03643
            status=isotig
          Length = 1956

 Score =  446 bits (225), Expect = e-125
 Identities = 225/225 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgttgccagaatctgttgccattgtcatggcaccaagagatacttcaagaaaacatggc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 atgttgccagaatctgttgccattgtcatggcaccaagagatacttcaagaaaacatggc 1623

                                                                        
Query: 61   atttttcggttgacatcccctggtggcatgtccgttataagacactgccagcaacgtgga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 atttttcggttgacatcccctggtggcatgtccgttataagacactgccagcaacgtgga 1683

                                                                        
Query: 121  tttcatccacatgatcaacctccagatggtgggccgatttacaacacctgtacagatgtc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 tttcatccacatgatcaacctccagatggtgggccgatttacaacacctgtacagatgtc 1743

                                                         
Query: 181  tatatgaatcccaacctaaagtttgatgttattgacctacgataa 225
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1744 tatatgaatcccaacctaaagtttgatgttattgacctacgataa 1788