Jatropha Genome Database

Jcr4S00006.260
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Jcr4S00006.260 /short
         (74 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g04970.1                                                       149   9e-37
Glyma05g34700.1                                                       147   3e-36
Glyma09g31540.1                                                       144   2e-35
Glyma07g10350.1                                                       144   2e-35
Glyma07g37130.1                                                       122   1e-28
Glyma17g03490.1                                                       120   4e-28
Glyma01g03710.1                                                       107   4e-24
Glyma01g03710.2                                                       106   6e-24

>Glyma08g04970.1 
          Length = 499

 Score =  149 bits (375), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 65/74 (87%), Positives = 71/74 (95%)

Query: 1   MLPESVAIVMAPRDTSRKHGIFRLTSPGGMSVIRHCQQRGFHPHDQPPDGGPIYNTCTDV 60
           MLPE+VAIVMAP D+SR HGIFRLT+PGGMSVIR CQQRGFHPH+QPPDGGPIY+TCTDV
Sbjct: 426 MLPEAVAIVMAPTDSSRSHGIFRLTTPGGMSVIRQCQQRGFHPHNQPPDGGPIYDTCTDV 485

Query: 61  YMNPNLKFDVIDLR 74
           YMNP+LKFDVIDLR
Sbjct: 486 YMNPDLKFDVIDLR 499


>Glyma05g34700.1 
          Length = 522

 Score =  147 bits (371), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 65/74 (87%), Positives = 71/74 (95%)

Query: 1   MLPESVAIVMAPRDTSRKHGIFRLTSPGGMSVIRHCQQRGFHPHDQPPDGGPIYNTCTDV 60
           MLPE+VAIVMAP D+SR HGIFRLT+PGGMSVIR CQQRGFHPH+QPPDGGPIY+TCTDV
Sbjct: 449 MLPEAVAIVMAPTDSSRNHGIFRLTTPGGMSVIRQCQQRGFHPHNQPPDGGPIYDTCTDV 508

Query: 61  YMNPNLKFDVIDLR 74
           YMNP+LKFDVIDLR
Sbjct: 509 YMNPDLKFDVIDLR 522


>Glyma09g31540.1 
          Length = 520

 Score =  144 bits (364), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/74 (86%), Positives = 69/74 (93%)

Query: 1   MLPESVAIVMAPRDTSRKHGIFRLTSPGGMSVIRHCQQRGFHPHDQPPDGGPIYNTCTDV 60
           MLPESVAIVMAPRD+SR HGIFRLT+PGGMSVI+ C QRGFHPH QPPDGGPIY TCTDV
Sbjct: 447 MLPESVAIVMAPRDSSRNHGIFRLTTPGGMSVIKQCDQRGFHPHSQPPDGGPIYKTCTDV 506

Query: 61  YMNPNLKFDVIDLR 74
           YMNP+LKF+VIDLR
Sbjct: 507 YMNPDLKFEVIDLR 520


>Glyma07g10350.1 
          Length = 519

 Score =  144 bits (362), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/74 (86%), Positives = 69/74 (93%)

Query: 1   MLPESVAIVMAPRDTSRKHGIFRLTSPGGMSVIRHCQQRGFHPHDQPPDGGPIYNTCTDV 60
           MLPESVAIVMAPRD+SR HGIFRLT+PGGMSVI+ C QRGFHPH QPPDGGPIY TCTDV
Sbjct: 446 MLPESVAIVMAPRDSSRNHGIFRLTAPGGMSVIKQCDQRGFHPHSQPPDGGPIYKTCTDV 505

Query: 61  YMNPNLKFDVIDLR 74
           YMNP+LKF+VIDLR
Sbjct: 506 YMNPDLKFEVIDLR 519


>Glyma07g37130.1 
          Length = 504

 Score =  122 bits (305), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 53/74 (71%), Positives = 63/74 (85%)

Query: 1   MLPESVAIVMAPRDTSRKHGIFRLTSPGGMSVIRHCQQRGFHPHDQPPDGGPIYNTCTDV 60
           MLPE++AIVMAP DT+  HGIF L+ PGG+SVIR+CQQRGFHPH++P DG PIY  C+ V
Sbjct: 429 MLPEAIAIVMAPTDTTSPHGIFHLSDPGGVSVIRNCQQRGFHPHEEPEDGTPIYEHCSHV 488

Query: 61  YMNPNLKFDVIDLR 74
           YMN NLKFDV+DLR
Sbjct: 489 YMNANLKFDVVDLR 502


>Glyma17g03490.1 
          Length = 504

 Score =  120 bits (301), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 53/74 (71%), Positives = 63/74 (85%)

Query: 1   MLPESVAIVMAPRDTSRKHGIFRLTSPGGMSVIRHCQQRGFHPHDQPPDGGPIYNTCTDV 60
           MLPE++AIVMAP DT+  HGIF L+ PGG+SVIR+CQQRGFHPH++P DG PIY  C+ V
Sbjct: 429 MLPEAIAIVMAPTDTTSPHGIFHLSDPGGVSVIRNCQQRGFHPHEEPEDGTPIYEHCSHV 488

Query: 61  YMNPNLKFDVIDLR 74
           YMN NLKFDV+DLR
Sbjct: 489 YMNANLKFDVVDLR 502


>Glyma01g03710.1 
          Length = 291

 Score =  107 bits (266), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/74 (55%), Positives = 59/74 (79%)

Query: 1   MLPESVAIVMAPRDTSRKHGIFRLTSPGGMSVIRHCQQRGFHPHDQPPDGGPIYNTCTDV 60
           M+PE+ AIV+AP DTSR  G+FRLT P GM+++++CQ+ GFHPH +P +G P+Y  C++V
Sbjct: 216 MIPEAFAIVLAPNDTSRSCGLFRLTKPEGMNILKNCQETGFHPHKEPDNGSPVYEHCSNV 275

Query: 61  YMNPNLKFDVIDLR 74
           Y N NL+F++ DLR
Sbjct: 276 YKNSNLRFEIFDLR 289


>Glyma01g03710.2 
          Length = 267

 Score =  106 bits (264), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/74 (55%), Positives = 59/74 (79%)

Query: 1   MLPESVAIVMAPRDTSRKHGIFRLTSPGGMSVIRHCQQRGFHPHDQPPDGGPIYNTCTDV 60
           M+PE+ AIV+AP DTSR  G+FRLT P GM+++++CQ+ GFHPH +P +G P+Y  C++V
Sbjct: 192 MIPEAFAIVLAPNDTSRSCGLFRLTKPEGMNILKNCQETGFHPHKEPDNGSPVYEHCSNV 251

Query: 61  YMNPNLKFDVIDLR 74
           Y N NL+F++ DLR
Sbjct: 252 YKNSNLRFEIFDLR 265