Jatropha Genome Database

Jcr4S09385.70
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jcr4S09385.70 /short/partial
         (232 letters)

Database: JAT_unigene 
           122,497 sequences; 49,272,789 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

contig06913  length=5656  numreads=435  gene=isogroup01822  stat...   460   e-129

>contig06913  length=5656  numreads=435  gene=isogroup01822
            status=isotig
          Length = 5656

 Score =  460 bits (232), Expect = e-129
 Identities = 232/232 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgcaaactagaaagaccttctcttggataaaggaagagattactcgttccatttctgta 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2706 atgcaaactagaaagaccttctcttggataaaggaagagattactcgttccatttctgta 2765

                                                                        
Query: 61   tcgctcatggtatatataataacttgggcatccatttcaaacgcatatcccatttttgca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2766 tcgctcatggtatatataataacttgggcatccatttcaaacgcatatcccatttttgca 2825

                                                                        
Query: 121  cagcagggttatgaaaatccacgcgaagcaactggccgtattgtatgtgccaattgtcat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2826 cagcagggttatgaaaatccacgcgaagcaactggccgtattgtatgtgccaattgtcat 2885

                                                                
Query: 181  ttagctaataagcccgtggatattgaggttccacaggcggtacttcctgata 232
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2886 ttagctaataagcccgtggatattgaggttccacaggcggtacttcctgata 2937