hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-19473373/chunk_1/iprscan-20080502-19473373.nocrc
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Query sequence: KIAA2035
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00356                                                  81.6    9.2e-20   3

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00356     1/3     219   244 ..     1    31 []    32.7    5e-05
SM00356     2/3     248   273 ..     1    31 []    38.4  9.7e-07
SM00356     3/3     274   297 ..     1    31 []    10.5      5.2

Alignments of top-scoring domains:
SM00356: domain 1 of 3, from 219 to 244: score 32.7, E = 5e-05
                   *->kyktelCkfFarrGppgyCpyGdrCkfaHpl<-*
                      k k ++Ck+F + G   +C +Gd+Ckf H+    
    KIAA2035   219    KGK-QICKYF-LEG---RCIKGDQCKFDHDA    244  

SM00356: domain 2 of 3, from 248 to 273: score 38.4, E = 9.7e-07
                   *->kyktelCkfFarrGppgyCpyGdrCkfaHpl<-*
                      k+k e+Ckf+ ++G   yC +G++C ++H++   
    KIAA2035   248    KRK-EICKFY-LQG---YCTKGENCIYMHNE    273  

SM00356: domain 3 of 3, from 274 to 297: score 10.5, E = 5.2
                   *->kyktelCkfFarrGppgyCpyGdrCkfaHpl<-*
                           +Ckf+   G    C  Gd+Ckf+H++   
    KIAA2035   274    ----FPCKFY-HSG--AKCYQGDNCKFSHDD    297  

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