hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-19404834/chunk_1/iprscan-20080502-19404834.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA2031
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00322                                                 110.1    2.5e-28   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00322    1/2      41   109 ..     1    63 []    48.1  1.2e-09
SM00322    2/2     136   203 ..     1    63 []    62.0  7.7e-14

Alignments of top-scoring domains:
SM00322: domain 1 of 2, from 41 to 109: score 48.1, E = 1.2e-09
                   *->a.vtiev.ipa.dkvGriIGkgGstIkkieeetgvkIdipg...ert
                       + t+ v++p++++v+ i+G++G  Ik+++ +t++ I+ p +++e +
    KIAA2031    41    VnMTECVpVPSsEHVAEIVGRQGCKIKALRAKTNTYIKTPVrgeEPV 87   

                   vtItGppenvekAkelileile<-*
                   + +tG +e+ve Ak++il+  e   
    KIAA2031    88 FIVTGRKEDVEMAKREILSAAE    109  

SM00322: domain 2 of 2, from 136 to 203: score 62.0, E = 7.7e-14
                   *->a.vtiev.ipadkvGriIGkgGstIkkieeetgvkIdipg...ertv
                       ++ti+v++p + vG+++G++G+tIk+i++ t + I+ pg+++e ++
    KIAA2031   136    GqTTIQVrVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGrdkEPVF 182  

                   tItGppenvekAkelileile<-*
                    +tG penv +A+e+i++ +    
    KIAA2031   183 AVTGMPENVDRAREEIEAHIT    203  

//