hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-19131614/chunk_1/iprscan-20080502-19131614.nocrc
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Query sequence: KIAA2015
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00248                                                 112.4    5.2e-29   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00248    1/6      71   100 ..     1    30 []    24.2    0.018
SM00248    2/6     104   133 ..     1    30 []    19.6     0.44
SM00248    3/6     137   166 ..     1    30 []    28.6  0.00084
SM00248    4/6     170   199 ..     1    30 []    24.3    0.017
SM00248    5/6     203   232 ..     1    30 []    14.5       15
SM00248    6/6     236   265 ..     1    30 []     1.1  3.4e+03

Alignments of top-scoring domains:
SM00248: domain 1 of 6, from 71 to 100: score 24.2, E = 0.018
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       +rT LHlA+++g++ vv lLl +   i++   
    KIAA2015    71    KDRTVLHLACAHGRVQVVTLLLHRRCQIDI    100  

SM00248: domain 2 of 6, from 104 to 133: score 19.6, E = 0.44
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       +rTpL+ A+ +  + ++  Ll+ ga++n+   
    KIAA2015   104    LNRTPLMKAVHSQEEACAIVLLECGANPNI    133  

SM00248: domain 3 of 6, from 137 to 166: score 28.6, E = 0.00084
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G+T+LH+A++n+  ++++ Ll++ a+i+a   
    KIAA2015   137    YGNTALHYAVYNKGTSLAERLLSHHANIEA    166  

SM00248: domain 4 of 6, from 170 to 199: score 24.3, E = 0.017
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G+TpL  A+ + + ++v++Ll++ a+i+a   
    KIAA2015   170    EGNTPLLFAINSRRQHMVEFLLKNQANIHA    199  

SM00248: domain 5 of 6, from 203 to 232: score 14.5, E = 15
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                        rT+L lA++++  ++v lLl+ +  i     
    KIAA2015   203    FKRTALILAVQHNLSSIVTLLLQQNIRISS    232  

SM00248: domain 6 of 6, from 236 to 265: score 1.1, E = 3.4e+03
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+  +A +++  ++ + +l+++  + +   
    KIAA2015   236    FGQTAEDYALCSDLRSIRQQILEHKNKMLK    265  

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