hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-19131614/chunk_1/iprscan-20080502-19131614.nocrc
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Query sequence: KIAA2015
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00023.20.ls Ankyrin repeat                                 143.4    5.6e-40   5
PF00023.20.fs Ankyrin repeat                                 134.2    3.2e-37   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00023.20.fs   1/6      43    70 ..     7    33 .]     0.8       31
PF00023.20.ls   1/5      71   103 ..     1    33 []    29.6    1e-05
PF00023.20.fs   2/6      71   103 ..     1    33 []    27.6    1e-06
PF00023.20.ls   2/5     104   136 ..     1    33 []    26.8  7.3e-05
PF00023.20.fs   3/6     104   136 ..     1    33 []    24.8  6.4e-06
PF00023.20.ls   3/5     137   169 ..     1    33 []    36.4    9e-08
PF00023.20.fs   4/6     137   169 ..     1    33 []    34.4  1.3e-08
PF00023.20.ls   4/5     170   202 ..     1    33 []    29.6    1e-05
PF00023.20.fs   5/6     170   202 ..     1    33 []    27.6    1e-06
PF00023.20.ls   5/5     203   235 ..     1    33 []    21.0   0.0039
PF00023.20.fs   6/6     203   235 ..     1    33 []    19.0  0.00026

Alignments of top-scoring domains:
PF00023.20.fs: domain 1 of 6, from 43 to 70: score 0.8, E = 31
                   *->HlAalrgnlevvklLls.qGAdlnaqdd<-*
                      H Aa++g++  v+  l ++  dl+a+d+   
    KIAA2015    43    HRAAIKGDAAEVERCLTrRFRDLDARDR    70   

PF00023.20.ls: domain 1 of 5, from 71 to 103: score 29.6, E = 1e-05
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                        +T LHlA+ +g+++vv+lLl + + +++ d+   
    KIAA2015    71    KDRTVLHLACAHGRVQVVTLLLHRRCQIDICDR    103  

PF00023.20.fs: domain 2 of 6, from 71 to 103: score 27.6, E = 1e-06
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                        +T LHlA+ +g+++vv+lLl + + +++ d+   
    KIAA2015    71    KDRTVLHLACAHGRVQVVTLLLHRRCQIDICDR    103  

PF00023.20.ls: domain 2 of 5, from 104 to 136: score 26.8, E = 7.3e-05
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                        +TPL+ A+++  + ++  Ll++GA++n++d    
    KIAA2015   104    LNRTPLMKAVHSQEEACAIVLLECGANPNIKDI    136  

PF00023.20.fs: domain 3 of 6, from 104 to 136: score 24.8, E = 6.4e-06
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                        +TPL+ A+++  + ++  Ll++GA++n++d    
    KIAA2015   104    LNRTPLMKAVHSQEEACAIVLLECGANPNIKDI    136  

PF00023.20.ls: domain 3 of 5, from 137 to 169: score 36.4, E = 9e-08
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      +G+T+LH+A+++ ++++++ Lls+ A++ a ++   
    KIAA2015   137    YGNTALHYAVYNKGTSLAERLLSHHANIEALNK    169  

PF00023.20.fs: domain 4 of 6, from 137 to 169: score 34.4, E = 1.3e-08
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      +G+T+LH+A+++ ++++++ Lls+ A++ a ++   
    KIAA2015   137    YGNTALHYAVYNKGTSLAERLLSHHANIEALNK    169  

PF00023.20.ls: domain 4 of 5, from 170 to 202: score 29.6, E = 1e-05
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      +G+TPL  A+ + +  +v++Ll++ A+++a+d+   
    KIAA2015   170    EGNTPLLFAINSRRQHMVEFLLKNQANIHAVDN    202  

PF00023.20.fs: domain 5 of 6, from 170 to 202: score 27.6, E = 1e-06
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      +G+TPL  A+ + +  +v++Ll++ A+++a+d+   
    KIAA2015   170    EGNTPLLFAINSRRQHMVEFLLKNQANIHAVDN    202  

PF00023.20.ls: domain 5 of 5, from 203 to 235: score 21.0, E = 0.0039
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                        +T+L lA++++  ++v+lLl+q   +  qd    
    KIAA2015   203    FKRTALILAVQHNLSSIVTLLLQQNIRISSQDM    235  

PF00023.20.fs: domain 6 of 6, from 203 to 235: score 19.0, E = 0.00026
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                        +T+L lA++++  ++v+lLl+q   +  qd    
    KIAA2015   203    FKRTALILAVQHNLSSIVTLLLQQNIRISSQDM    235  

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