hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-19113975/chunk_1/iprscan-20080502-19113975.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA2014 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF02181.13.ls Formin Homology 2 Domain 497.3 1.6e-146 1 PF02181.13.fs Formin Homology 2 Domain 495.3 6.4e-146 1 PF06371.4.fs Diaphanous GTPase-binding Domain 256.8 1.1e-83 1 PF06371.4.ls Diaphanous GTPase-binding Domain 258.6 1.2e-74 1 PF06367.7.fs Diaphanous FH3 Domain 233.4 3.4e-70 1 PF06367.7.ls Diaphanous FH3 Domain 235.3 1.2e-67 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF06371.4.ls 1/1 31 284 .. 1 323 [] 258.6 1.2e-74 PF06371.4.fs 1/1 31 284 .. 1 323 [] 256.8 1.1e-83 PF06367.7.fs 1/1 286 487 .. 1 234 [] 233.4 3.4e-70 PF06367.7.ls 1/1 286 487 .. 1 234 [] 235.3 1.2e-67 PF02181.13.fs 1/1 567 931 .. 1 413 [] 495.3 6.4e-146 PF02181.13.ls 1/1 567 931 .. 1 413 [] 497.3 1.6e-146 Alignments of top-scoring domains: PF06371.4.ls: domain 1 of 1, from 31 to 284: score 258.6, E = 1.2e-74 *->lqmpsdeeLVdelFeelLkedrifmnlpedKrWeaLralsnekKWel ++mp eL +e+F+ +L mnlp+dK + Lr+++nekKW l KIAA2014 31 MPMPEPCEL-EERFALVL-SS---MNLPPDKA-RLLRQYDNEKKWDL 71 icqylsknkkgkkkksskselnekaiaSdileilteesspqeYiekLrsg ic++ + k+ +p +Yi+kL+s KIAA2014 72 ICDQERFQV---KN------------------------PPHTYIQKLQSF 94 assekllscekeeeehslknkslgslSpstkvvddgLkvaelesLrVsLr ++ + + + k+++++++ stkv l+ L++sLr KIAA2014 95 LDPSVT----------RKKFRRRVQE--STKV---------LRELEISLR 123 tnpvsWVkaFiklgNkGlirllkiLqtflkkkiyelestds.vesgveks tn++ WV++F++ +NkGl++l+++L++ ++ +e +s+ + +++k KIAA2014 124 TNHIGWVREFLNDENKGLDVLVDYLSFAQCSVMFDFEGLESgDDGAFDKL 173 kkdspssedlskasprpsPqqnssqesksqqtlkllsqlsaqaqqlqkqq +++s+s+edl+ +s + P ns +s +q++l++++++ KIAA2014 174 RSWSRSIEDLQPPSALSAPFTNSLARSARQSVLRYSTLPG---------- 213 lqqsttliektlpsidkkiqfecirClKalMNnklGlkrvLsheesivik ++++++++ +k++ ++ci Cl+a+MN+++G++ v+sh ++ ++ KIAA2014 214 ----RRALKNSRLVSQKDDVHVCILCLRAIMNYQYGFNLVMSHPHA--VN 257 llvlsLdssklktrklvleLLaalCiv<-* ++lsL++++++t+ lvleLLaa+C+v KIAA2014 258 EIALSLNNKNPRTKALVLELLAAVCLV 284 PF06371.4.fs: domain 1 of 1, from 31 to 284: score 256.8, E = 1.1e-83 *->lqmpsdeeLVdelFeelLkedrifmnlpedKrWeaLralsnekKWel ++mp eL +e+F+ +L mnlp+dK + Lr+++nekKW l KIAA2014 31 MPMPEPCEL-EERFALVL-SS---MNLPPDKA-RLLRQYDNEKKWDL 71 icqylsknkkgkkkksskselnekaiaSdileilteesspqeYiekLrsg ic++ + k+ +p +Yi+kL+s KIAA2014 72 ICDQERFQV---KN------------------------PPHTYIQKLQSF 94 assekllscekeeeehslknkslgslSpstkvvddgLkvaelesLrVsLr ++ + + + k+++++++ stkv l+ L++sLr KIAA2014 95 LDPSVT----------RKKFRRRVQE--STKV---------LRELEISLR 123 tnpvsWVkaFiklgNkGlirllkiLqtflkkkiyelestds.vesgveks tn++ WV++F++ +NkGl++l+++L++ ++ +e +s+ + +++k KIAA2014 124 TNHIGWVREFLNDENKGLDVLVDYLSFAQCSVMFDFEGLESgDDGAFDKL 173 kkdspssedlskasprpsPqqnssqesksqqtlkllsqlsaqaqqlqkqq +++s+s+edl+ +s + P ns +s +q++l++++++ KIAA2014 174 RSWSRSIEDLQPPSALSAPFTNSLARSARQSVLRYSTLPG---------- 213 lqqsttliektlpsidkkiqfecirClKalMNnklGlkrvLsheesivik ++++++++ +k++ ++ci Cl+a+MN+++G++ v+sh ++ ++ KIAA2014 214 ----RRALKNSRLVSQKDDVHVCILCLRAIMNYQYGFNLVMSHPHA--VN 257 llvlsLdssklktrklvleLLaalCiv<-* ++lsL++++++t+ lvleLLaa+C+v KIAA2014 258 EIALSLNNKNPRTKALVLELLAAVCLV 284 PF06367.7.fs: domain 1 of 1, from 286 to 487: score 233.4, E = 3.4e-70 *->gGhelvleaiinfkevcdereRFrtlvsaldsfssgeedasleykva gGhe++l a++nfkevc+e +RF+ l++++++ ed +++++va KIAA2014 286 GGHEIILAAFDNFKEVCKELHRFEKLMEYFRN-----EDSNIDFMVA 327 tmqFINalvvagnspedlqfRlhLRsEftelGLdeyleklkntssesdkL +mqFIN++v +s+ed++fR+hL++Eft+lGL e l+k+++t es+kL KIAA2014 328 CMQFINIVV---HSVEDMNFRVHLQYEFTKLGLEEFLQKSRHT--ESEKL 372 ddqIklFeenmidvrellddantktkvledleeleerleelkesfaetsv ++qI+++ +n++dv+ ll+da+tk+ +le++eelee++++l+e++ + KIAA2014 373 QVQIQAYLDNVFDVGGLLEDAETKNVALEKVEELEEHVSHLTEKLLD--L 420 eldslssvaellsnllkltgaedlllSilQhllllredseeskLvsyikl e++++++vael+++ll+ ++++ +++++e++ ++++ KIAA2014 421 ENENMMRVAELEKQLLQREKELE-----------SIKETYENT-SHQVHT 458 leeivqqIllhrtkppdpkfeqslqenldegterlld<-* l +++++ ++ +++ +e + + ++ +d KIAA2014 459 LRRLIKE--KEEAFQRRCHLEPNVRGLES------VD 487 PF06367.7.ls: domain 1 of 1, from 286 to 487: score 235.3, E = 1.2e-67 *->gGhelvleaiinfkevcdereRFrtlvsaldsfssgeedasleykva gGhe++l a++nfkevc+e +RF+ l++++++ ed +++++va KIAA2014 286 GGHEIILAAFDNFKEVCKELHRFEKLMEYFRN-----EDSNIDFMVA 327 tmqFINalvvagnspedlqfRlhLRsEftelGLdeyleklkntssesdkL +mqFIN++v +s+ed++fR+hL++Eft+lGL e l+k+++t es+kL KIAA2014 328 CMQFINIVV---HSVEDMNFRVHLQYEFTKLGLEEFLQKSRHT--ESEKL 372 ddqIklFeenmidvrellddantktkvledleeleerleelkesfaetsv ++qI+++ +n++dv+ ll+da+tk+ +le++eelee++++l+e++ + KIAA2014 373 QVQIQAYLDNVFDVGGLLEDAETKNVALEKVEELEEHVSHLTEKLLD--L 420 eldslssvaellsnllkltgaedlllSilQhllllredseeskLvsyikl e++++++vael+++ll+ ++++ +++++e++ ++++ KIAA2014 421 ENENMMRVAELEKQLLQREKELE-----------SIKETYENT-SHQVHT 458 leeivqqIllhrtkppdpkfeqslqenldegterlld<-* l +++++ ++ +++ +e + + ++ +d KIAA2014 459 LRRLIKE--KEEAFQRRCHLEPNVRGLES------VD 487 PF02181.13.fs: domain 1 of 1, from 567 to 931: score 495.3, E = 6.4e-146 *->kkepkpkkkLKpLhWdKlnpsqdrgtsvWdkldeesfekkldldlse kk++k+k++L+ ++W++l+p+q++gt v+ +ld+e++ + dldl++ KIAA2014 567 KKPIKTKFRLPVFNWTALKPNQISGT-VFSELDDEKILE--DLDLDK 610 lEelFsakakkkkekksseksskskkkkkeisvLDpkrsQNiaIlLrkls +EelF++ka++++ + ++k++ ++k++ ++++L+++r++N+aI+Lrk KIAA2014 611 FEELFKTKAQGPALDLICSKNKTAQKAASKVTLLEANRAKNLAITLRKA- 659 klppeeivqailemDedvLgvvlflkemldllenLlkmaPtkeElkklqe + ++eei++ai+ +D +L+ +d++e+L++++Pt+ E+k+l KIAA2014 660 GRSAEEICRAIHTFDLQTLP--------VDFVECLMRFLPTEAEVKLL-- 699 keykgdekspskLgraEqqFLlelskliprleeRlrallFkstFeeevee ++y +++++++L+ ++ +F+l +sk ++rl++R+ ++F +F+++ ++ KIAA2014 700 RQYERERQPLEELAAED-RFMLLFSK-VERLTQRMAGMAFLGNFQDNLQM 747 lkpsletleaAseeLreSrkfkklLeliLalGNyMNsGtrrrGnAkGFkL l+p+l++++aAs ++++S+k+k++Le+iLalGNyMNs +r G ++GFkL KIAA2014 748 LTPQLNAIIAASASVKSSQKLKQMLEIILALGNYMNSSKR--GAVYGFKL 795 ssLlKLsdvKstidnktTLLHflvkeieesEGkrlEeyrKLklpelldfs +sL+ L+d+Kst d+k+TLLHf++ ++ e k+p+l++f+ KIAA2014 796 QSLDLLLDTKST-DRKMTLLHFIALTVKE------------KYPDLANFW 832 seLshVekAakvdleeLeadvkeLekglkklekelelseeSkvsdeepsd eL++VekAa+v+le++ dvkeL +g++ +++e++ + + KIAA2014 833 HELHFVEKAAAVSLENVLLDVKELGRGMELIRRECSIHDN---------- 872 kFvevmkeFleeAeekldkLesllkeakelfkelteYFghggedpkdets +v++ Fl + e kldkL+ + k+a e+++ +++YF ge+pk +t+ KIAA2014 873 ---SVLRNFLSTNEGKLDKLQRDAKTAEEAYNAVVRYF---GESPK-TTP 915 peeFFkilrdFlnefk<-* p +FF ++ +F++ +k KIAA2014 916 PSVFFPVFVRFIRSYK 931 PF02181.13.ls: domain 1 of 1, from 567 to 931: score 497.3, E = 1.6e-146 *->kkepkpkkkLKpLhWdKlnpsqdrgtsvWdkldeesfekkldldlse kk++k+k++L+ ++W++l+p+q++gt v+ +ld+e++ + dldl++ KIAA2014 567 KKPIKTKFRLPVFNWTALKPNQISGT-VFSELDDEKILE--DLDLDK 610 lEelFsakakkkkekksseksskskkkkkeisvLDpkrsQNiaIlLrkls +EelF++ka++++ + ++k++ ++k++ ++++L+++r++N+aI+Lrk KIAA2014 611 FEELFKTKAQGPALDLICSKNKTAQKAASKVTLLEANRAKNLAITLRKA- 659 klppeeivqailemDedvLgvvlflkemldllenLlkmaPtkeElkklqe + ++eei++ai+ +D +L+ +d++e+L++++Pt+ E+k+l KIAA2014 660 GRSAEEICRAIHTFDLQTLP--------VDFVECLMRFLPTEAEVKLL-- 699 keykgdekspskLgraEqqFLlelskliprleeRlrallFkstFeeevee ++y +++++++L+ ++ +F+l +sk ++rl++R+ ++F +F+++ ++ KIAA2014 700 RQYERERQPLEELAAED-RFMLLFSK-VERLTQRMAGMAFLGNFQDNLQM 747 lkpsletleaAseeLreSrkfkklLeliLalGNyMNsGtrrrGnAkGFkL l+p+l++++aAs ++++S+k+k++Le+iLalGNyMNs +r G ++GFkL KIAA2014 748 LTPQLNAIIAASASVKSSQKLKQMLEIILALGNYMNSSKR--GAVYGFKL 795 ssLlKLsdvKstidnktTLLHflvkeieesEGkrlEeyrKLklpelldfs +sL+ L+d+Kst d+k+TLLHf++ ++ e k+p+l++f+ KIAA2014 796 QSLDLLLDTKST-DRKMTLLHFIALTVKE------------KYPDLANFW 832 seLshVekAakvdleeLeadvkeLekglkklekelelseeSkvsdeepsd eL++VekAa+v+le++ dvkeL +g++ +++e++ + + KIAA2014 833 HELHFVEKAAAVSLENVLLDVKELGRGMELIRRECSIHDN---------- 872 kFvevmkeFleeAeekldkLesllkeakelfkelteYFghggedpkdets +v++ Fl + e kldkL+ + k+a e+++ +++YF ge+pk +t+ KIAA2014 873 ---SVLRNFLSTNEGKLDKLQRDAKTAEEAYNAVVRYF---GESPK-TTP 915 peeFFkilrdFlnefk<-* p +FF ++ +F++ +k KIAA2014 916 PSVFFPVFVRFIRSYK 931 //