# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fj05611.fasta.nr -Q ../query/KIAA2009.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA2009, 501 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7816857 sequences Expectation_n fit: rho(ln(x))= 6.3942+/-0.000204; mu= 7.0468+/- 0.011 mean_var=132.9932+/-25.380, 0's: 38 Z-trim: 65 B-trim: 0 in 0/67 Lambda= 0.111214 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|74762391|sp|Q6ZN04.1|MEX3B_HUMAN RecName: Full= ( 569) 3278 537.3 4.1e-150 gi|71052146|gb|AAH36211.1| MEX3B protein [Homo sap ( 569) 3264 535.0 2e-149 gi|114658524|ref|XP_523137.2| PREDICTED: ring fing ( 572) 3259 534.2 3.4e-149 gi|117646414|emb|CAL38674.1| hypothetical protein ( 569) 3258 534.1 3.8e-149 gi|117644854|emb|CAL37893.1| hypothetical protein ( 569) 3258 534.1 3.8e-149 gi|109082143|ref|XP_001110186.1| PREDICTED: simila ( 570) 3243 531.6 2e-148 gi|148674944|gb|EDL06891.1| mCG8258 [Mus musculus] ( 539) 3221 528.1 2.3e-147 gi|126253681|sp|Q69Z36.2|MEX3B_MOUSE RecName: Full ( 601) 3221 528.1 2.4e-147 gi|149257395|ref|XP_917553.3| PREDICTED: similar t ( 626) 3221 528.2 2.5e-147 gi|194206214|ref|XP_001915985.1| PREDICTED: mex-3 ( 574) 3203 525.2 1.7e-146 gi|149257537|ref|XP_620516.3| PREDICTED: ring fing ( 576) 3160 518.3 2.1e-144 gi|109459006|ref|XP_218846.4| PREDICTED: similar t (1036) 3144 516.0 1.9e-143 gi|126273621|ref|XP_001362773.1| PREDICTED: hypoth ( 565) 2963 486.7 6.7e-135 gi|149057415|gb|EDM08738.1| rCG24885 [Rattus norve ( 448) 2911 478.3 1.9e-132 gi|82697002|gb|AAI08402.1| Mex3b protein [Mus musc ( 418) 2745 451.6 1.8e-124 gi|194676729|ref|XP_001790292.1| PREDICTED: simila ( 588) 2709 446.0 1.3e-122 gi|21594518|gb|AAH31512.1| Mex3b protein [Mus musc ( 343) 2245 371.3 2.3e-100 gi|45500989|gb|AAH67199.1| Mex3b protein [Mus musc ( 337) 2207 365.2 1.5e-98 gi|73951683|ref|XP_545877.2| PREDICTED: similar to ( 678) 2065 342.7 1.8e-91 gi|21739151|emb|CAB66712.2| hypothetical protein [ ( 266) 1832 304.9 1.7e-80 gi|124297228|gb|AAI31872.1| Zgc:158350 [Danio reri ( 537) 1461 245.7 2.3e-62 gi|47213916|emb|CAF90739.1| unnamed protein produc ( 257) 1193 202.4 1.2e-49 gi|170284921|gb|AAI61012.1| Mex3c protein [Xenopus ( 442) 1086 185.5 2.6e-44 gi|89266802|emb|CAJ83991.1| ring finger and KH dom ( 493) 1086 185.5 2.8e-44 gi|149409774|ref|XP_001509290.1| PREDICTED: simila ( 537) 1083 185.1 4.1e-44 gi|82571586|gb|AAI10210.1| MEX3C protein [Bos taur ( 431) 1076 183.8 7.7e-44 gi|126320769|ref|XP_001362272.1| PREDICTED: simila ( 467) 1076 183.9 8.1e-44 gi|148677615|gb|EDL09562.1| mCG51389 [Mus musculus ( 463) 1075 183.7 9.1e-44 gi|149064591|gb|EDM14794.1| ring finger and KH dom ( 464) 1075 183.7 9.1e-44 gi|148922375|gb|AAI46417.1| Mex-3 homolog C (C. el ( 464) 1075 183.7 9.1e-44 gi|116138500|gb|AAI25428.1| Mex3 homolog C (C. ele ( 464) 1075 183.7 9.1e-44 gi|194214683|ref|XP_001916808.1| PREDICTED: mex-3 ( 477) 1075 183.7 9.2e-44 gi|73945972|ref|XP_533399.2| PREDICTED: similar to ( 485) 1075 183.7 9.4e-44 gi|194678156|ref|XP_607763.4| PREDICTED: mex-3 hom ( 492) 1075 183.7 9.5e-44 gi|134034169|sp|A1L3F4.1|MEX3B_XENLA RecName: Full ( 507) 1075 183.7 9.7e-44 gi|134047828|sp|Q05A36.2|MEX3C_MOUSE RecName: Full ( 652) 1075 183.9 1.2e-43 gi|194034998|ref|XP_001928390.1| PREDICTED: simila ( 655) 1075 183.9 1.2e-43 gi|134047827|sp|Q5U5Q3.3|MEX3C_HUMAN RecName: Full ( 659) 1075 183.9 1.2e-43 gi|118764337|gb|AAI28670.1| LOC100036809 protein [ ( 493) 1052 180.0 1.2e-42 gi|126323579|ref|XP_001370878.1| PREDICTED: simila ( 666) 1044 178.9 3.7e-42 gi|189516308|ref|XP_695633.3| PREDICTED: similar t ( 433) 1005 172.5 2.1e-40 gi|189518761|ref|XP_694381.3| PREDICTED: similar t ( 533) 991 170.3 1.1e-39 gi|73987544|ref|XP_855104.1| PREDICTED: similar to ( 551) 988 169.8 1.6e-39 gi|210104283|gb|EEA52308.1| hypothetical protein B ( 488) 984 169.1 2.3e-39 gi|145651818|ref|NP_941017.2| ring finger and KH d ( 718) 983 169.1 3.4e-39 gi|109480235|ref|XP_234921.4| PREDICTED: similar t ( 697) 982 169.0 3.8e-39 gi|76622862|ref|XP_583835.2| PREDICTED: similar to ( 473) 979 168.3 4e-39 gi|114674462|ref|XP_524036.2| PREDICTED: ring fing ( 740) 968 166.7 1.9e-38 gi|134034170|sp|Q3UE17.2|MEX3D_MOUSE RecName: Full ( 643) 966 166.4 2.1e-38 gi|120577567|gb|AAI30114.1| LOC733399 protein [Xen ( 440) 963 165.7 2.2e-38 >>gi|74762391|sp|Q6ZN04.1|MEX3B_HUMAN RecName: Full=RNA- (569 aa) initn: 3277 init1: 3277 opt: 3278 Z-score: 2851.2 bits: 537.3 E(): 4.1e-150 Smith-Waterman score: 3278; 97.996% identity (98.597% similar) in 499 aa overlap (8-501:71-569) 10 20 30 KIAA20 WACLSLSPTPSS--APWFVG---CKIKALRAKTNTYI :.::: . .:: :::::::::::::: gi|747 LSLLGLDSDEGASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYI 50 60 70 80 90 100 40 50 60 70 80 90 KIAA20 KTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 KTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ 110 120 130 140 150 160 100 110 120 130 140 150 KIAA20 TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREE 170 180 190 200 210 220 160 170 180 190 200 210 KIAA20 IEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 IEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKP 230 240 250 260 270 280 220 230 240 250 260 270 KIAA20 FSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 FSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGY 290 300 310 320 330 340 280 290 300 310 320 330 KIAA20 TYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 TYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSA 350 360 370 380 390 400 340 350 360 370 380 390 KIAA20 SSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 SSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV 410 420 430 440 450 460 400 410 420 430 440 450 KIAA20 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV 470 480 490 500 510 520 460 470 480 490 500 KIAA20 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS ::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS 530 540 550 560 >>gi|71052146|gb|AAH36211.1| MEX3B protein [Homo sapiens (569 aa) initn: 3263 init1: 3263 opt: 3264 Z-score: 2839.0 bits: 535.0 E(): 2e-149 Smith-Waterman score: 3264; 97.595% identity (98.597% similar) in 499 aa overlap (8-501:71-569) 10 20 30 KIAA20 WACLSLSPTPSS--APWFVG---CKIKALRAKTNTYI :.::: . .:: :::::::::::::: gi|710 LSLLGLDSDEGASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYI 50 60 70 80 90 100 40 50 60 70 80 90 KIAA20 KTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 KTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ 110 120 130 140 150 160 100 110 120 130 140 150 KIAA20 TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREE 170 180 190 200 210 220 160 170 180 190 200 210 KIAA20 IEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 IEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKP 230 240 250 260 270 280 220 230 240 250 260 270 KIAA20 FSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 FSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGY 290 300 310 320 330 340 280 290 300 310 320 330 KIAA20 TYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 TYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSA 350 360 370 380 390 400 340 350 360 370 380 390 KIAA20 SSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|710 SSSASSSSVVFPGSGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV 410 420 430 440 450 460 400 410 420 430 440 450 KIAA20 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|710 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV 470 480 490 500 510 520 460 470 480 490 500 KIAA20 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS :::::::::::::::.::::::::::::::::::::::::::::::::: gi|710 CFESEVIAALVPCGHSLFCMECANRICEKSEPECPVCHTAVTQAIRIFS 530 540 550 560 >>gi|114658524|ref|XP_523137.2| PREDICTED: ring finger a (572 aa) initn: 3258 init1: 3258 opt: 3259 Z-score: 2834.7 bits: 534.2 E(): 3.4e-149 Smith-Waterman score: 3259; 97.595% identity (98.196% similar) in 499 aa overlap (8-501:74-572) 10 20 30 KIAA20 WACLSLSPTPSS--APWFVG---CKIKALRAKTNTYI :.::: . .:: :::::::::::::: gi|114 LSLLGLDSDEGASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYI 50 60 70 80 90 100 40 50 60 70 80 90 KIAA20 KTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ 110 120 130 140 150 160 100 110 120 130 140 150 KIAA20 TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREE 170 180 190 200 210 220 160 170 180 190 200 210 KIAA20 IEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKP 230 240 250 260 270 280 220 230 240 250 260 270 KIAA20 FSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGY :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: gi|114 FSSYRNDSSSSLGSASTDSYFGGGTSSSAAATPRLADYSPPSPALSFAHNGNNNNNGNGY 290 300 310 320 330 340 280 290 300 310 320 330 KIAA20 TYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSA ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|114 TYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGAAAPVSSSCSSSA 350 360 370 380 390 400 340 350 360 370 380 390 KIAA20 SSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV 410 420 430 440 450 460 400 410 420 430 440 450 KIAA20 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV 470 480 490 500 510 520 460 470 480 490 500 KIAA20 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS ::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS 530 540 550 560 570 >>gi|117646414|emb|CAL38674.1| hypothetical protein [syn (569 aa) initn: 3257 init1: 3257 opt: 3258 Z-score: 2833.8 bits: 534.1 E(): 3.8e-149 Smith-Waterman score: 3258; 97.395% identity (98.597% similar) in 499 aa overlap (8-501:71-569) 10 20 30 KIAA20 WACLSLSPTPSS--APWFVG---CKIKALRAKTNTYI :.::: . .:: :::::::::::::: gi|117 LSLLGLDSDEGASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYI 50 60 70 80 90 100 40 50 60 70 80 90 KIAA20 KTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 KTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ 110 120 130 140 150 160 100 110 120 130 140 150 KIAA20 TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREE 170 180 190 200 210 220 160 170 180 190 200 210 KIAA20 IEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 IEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKP 230 240 250 260 270 280 220 230 240 250 260 270 KIAA20 FSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGY :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|117 FSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNSNNGNGY 290 300 310 320 330 340 280 290 300 310 320 330 KIAA20 TYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 TYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSA 350 360 370 380 390 400 340 350 360 370 380 390 KIAA20 SSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|117 SSSASSSSVVFPGSGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV 410 420 430 440 450 460 400 410 420 430 440 450 KIAA20 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV 470 480 490 500 510 520 460 470 480 490 500 KIAA20 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS :::::::::::::::.::::::::::::::::::::::::::::::::: gi|117 CFESEVIAALVPCGHSLFCMECANRICEKSEPECPVCHTAVTQAIRIFS 530 540 550 560 >>gi|117644854|emb|CAL37893.1| hypothetical protein [syn (569 aa) initn: 3257 init1: 3257 opt: 3258 Z-score: 2833.8 bits: 534.1 E(): 3.8e-149 Smith-Waterman score: 3258; 97.395% identity (98.597% similar) in 499 aa overlap (8-501:71-569) 10 20 30 KIAA20 WACLSLSPTPSS--APWFVG---CKIKALRAKTNTYI :.::: . .:: :::::::::::::: gi|117 LSLLGLDSDEGASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYI 50 60 70 80 90 100 40 50 60 70 80 90 KIAA20 KTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 KTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ 110 120 130 140 150 160 100 110 120 130 140 150 KIAA20 TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREE ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|117 TTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPSRDKEPVFEVTGMPENVDRAREE 170 180 190 200 210 220 160 170 180 190 200 210 KIAA20 IEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 IEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKP 230 240 250 260 270 280 220 230 240 250 260 270 KIAA20 FSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 FSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGY 290 300 310 320 330 340 280 290 300 310 320 330 KIAA20 TYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 TYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSA 350 360 370 380 390 400 340 350 360 370 380 390 KIAA20 SSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|117 SSSASSSSVVFPGSGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV 410 420 430 440 450 460 400 410 420 430 440 450 KIAA20 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV 470 480 490 500 510 520 460 470 480 490 500 KIAA20 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS :::::::::::::::.::::::::::::::::::::::::::::::::: gi|117 CFESEVIAALVPCGHSLFCMECANRICEKSEPECPVCHTAVTQAIRIFS 530 540 550 560 >>gi|109082143|ref|XP_001110186.1| PREDICTED: similar to (570 aa) initn: 1774 init1: 1774 opt: 3243 Z-score: 2820.8 bits: 531.6 E(): 2e-148 Smith-Waterman score: 3243; 97.194% identity (98.196% similar) in 499 aa overlap (8-501:73-570) 10 20 30 KIAA20 WACLSLSPTPSS--APWFVG---CKIKALRAKTNTYI :.::: . .:: :::::::::::::: gi|109 LSLLGLDSDEGASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYI 50 60 70 80 90 100 40 50 60 70 80 90 KIAA20 KTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ 110 120 130 140 150 160 100 110 120 130 140 150 KIAA20 TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREE 170 180 190 200 210 220 160 170 180 190 200 210 KIAA20 IEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKP 230 240 250 260 270 280 220 230 240 250 260 270 KIAA20 FSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGY :::::::::::::::::::::::::::::::: ::::::::::::.:::::::::::::: gi|109 FSSYRNDSSSSLGSASTDSYFGGGTSSSAAATPRLADYSPPSPALNFAHNGNNNNNGNGY 290 300 310 320 330 340 280 290 300 310 320 330 KIAA20 TYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSA ::::: :::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|109 TYTAG-EASVPSPDGCPELQPTFDPAPAPPPGAPLLWAQFERSPGGGPAAPVSSSCSSSA 350 360 370 380 390 400 340 350 360 370 380 390 KIAA20 SSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV 410 420 430 440 450 460 400 410 420 430 440 450 KIAA20 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV 470 480 490 500 510 520 460 470 480 490 500 KIAA20 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS ::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS 530 540 550 560 570 >>gi|148674944|gb|EDL06891.1| mCG8258 [Mus musculus] (539 aa) initn: 2829 init1: 2829 opt: 3221 Z-score: 2802.0 bits: 528.1 E(): 2.3e-147 Smith-Waterman score: 3221; 96.192% identity (97.996% similar) in 499 aa overlap (4-501:42-539) 10 20 30 KIAA20 WACLSLSPTPSSAPWFVGCKIKALRAKTNTYIK .:.::::: ::. :::::::::::::::: gi|148 FSGRVFCCPAALGAGCPGSPRLSWDNGRVSFSISPTPSLEPWLPGCKIKALRAKTNTYIK 20 30 40 50 60 70 40 50 60 70 80 90 KIAA20 TPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQT 80 90 100 110 120 130 100 110 120 130 140 150 KIAA20 TIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI 140 150 160 170 180 190 160 170 180 190 200 210 KIAA20 EAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPF 200 210 220 230 240 250 220 230 240 250 260 270 KIAA20 SSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYT :::::::::::::::::::::::::.:::::.:::::::::::::::::::::::::::: gi|148 SSYRNDSSSSLGSASTDSYFGGGTSGSAAATSRLADYSPPSPALSFAHNGNNNNNGNGYT 260 270 280 290 300 310 280 290 300 310 320 330 KIAA20 YTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSAS :::: ::::::::: ::::::::::::::::.::.::::::::::: ::::::::::::: gi|148 YTAG-EASVPSPDGGPELQPTFDPAPAPPPGTPLLWAQFERSPGGGSAAPVSSSCSSSAS 320 330 340 350 360 370 340 350 360 370 380 390 KIAA20 SSASSSSVVFPGGGASA-PSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV ::::::::::::::::. :::::::::::::::::::::::::::::: ::::::::::: gi|148 SSASSSSVVFPGGGASSTPSNANLGLLVHRRLHPGTSCPRLSPPLHMATGAGEHHLARRV 380 390 400 410 420 430 400 410 420 430 440 450 KIAA20 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV :::::::::::::::::::.::::: ::::::::::::::::::::::::::::::::: gi|148 RSDPGGGGLAYAAYANGLGTQLPGLPSSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV 440 450 460 470 480 490 460 470 480 490 500 KIAA20 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS ::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS 500 510 520 530 >>gi|126253681|sp|Q69Z36.2|MEX3B_MOUSE RecName: Full=RNA (601 aa) initn: 2829 init1: 2829 opt: 3221 Z-score: 2801.4 bits: 528.1 E(): 2.4e-147 Smith-Waterman score: 3221; 96.192% identity (97.996% similar) in 499 aa overlap (4-501:104-601) 10 20 30 KIAA20 WACLSLSPTPSSAPWFVGCKIKALRAKTNTYIK .:.::::: ::. :::::::::::::::: gi|126 TECVPVPSSEHVAEIVGRQGGSGRDGDRRGFSISPTPSLEPWLPGCKIKALRAKTNTYIK 80 90 100 110 120 130 40 50 60 70 80 90 KIAA20 TPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 TPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQT 140 150 160 170 180 190 100 110 120 130 140 150 KIAA20 TIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 TIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI 200 210 220 230 240 250 160 170 180 190 200 210 KIAA20 EAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 EAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPF 260 270 280 290 300 310 220 230 240 250 260 270 KIAA20 SSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYT :::::::::::::::::::::::::.:::::.:::::::::::::::::::::::::::: gi|126 SSYRNDSSSSLGSASTDSYFGGGTSGSAAATSRLADYSPPSPALSFAHNGNNNNNGNGYT 320 330 340 350 360 370 280 290 300 310 320 330 KIAA20 YTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSAS :::: ::::::::: ::::::::::::::::.::.::::::::::: ::::::::::::: gi|126 YTAG-EASVPSPDGGPELQPTFDPAPAPPPGTPLLWAQFERSPGGGSAAPVSSSCSSSAS 380 390 400 410 420 430 340 350 360 370 380 390 KIAA20 SSASSSSVVFPGGGASA-PSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV ::::::::::::::::. :::::::::::::::::::::::::::::: ::::::::::: gi|126 SSASSSSVVFPGGGASSTPSNANLGLLVHRRLHPGTSCPRLSPPLHMATGAGEHHLARRV 440 450 460 470 480 490 400 410 420 430 440 450 KIAA20 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV :::::::::::::::::::.::::: ::::::::::::::::::::::::::::::::: gi|126 RSDPGGGGLAYAAYANGLGTQLPGLPSSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV 500 510 520 530 540 550 460 470 480 490 500 KIAA20 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS ::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS 560 570 580 590 600 >>gi|149257395|ref|XP_917553.3| PREDICTED: similar to RN (626 aa) initn: 2829 init1: 2829 opt: 3221 Z-score: 2801.2 bits: 528.2 E(): 2.5e-147 Smith-Waterman score: 3221; 96.192% identity (97.996% similar) in 499 aa overlap (4-501:129-626) 10 20 30 KIAA20 WACLSLSPTPSSAPWFVGCKIKALRAKTNTYIK .:.::::: ::. :::::::::::::::: gi|149 GGPAPSAVRAALGAGCPGSPRLSWDNGRVSFSISPTPSLEPWLPGCKIKALRAKTNTYIK 100 110 120 130 140 150 40 50 60 70 80 90 KIAA20 TPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQT 160 170 180 190 200 210 100 110 120 130 140 150 KIAA20 TIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI 220 230 240 250 260 270 160 170 180 190 200 210 KIAA20 EAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPF 280 290 300 310 320 330 220 230 240 250 260 270 KIAA20 SSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYT :::::::::::::::::::::::::.:::::.:::::::::::::::::::::::::::: gi|149 SSYRNDSSSSLGSASTDSYFGGGTSGSAAATSRLADYSPPSPALSFAHNGNNNNNGNGYT 340 350 360 370 380 390 280 290 300 310 320 330 KIAA20 YTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSAS :::: ::::::::: ::::::::::::::::.::.::::::::::: ::::::::::::: gi|149 YTAG-EASVPSPDGGPELQPTFDPAPAPPPGTPLLWAQFERSPGGGSAAPVSSSCSSSAS 400 410 420 430 440 450 340 350 360 370 380 390 KIAA20 SSASSSSVVFPGGGASA-PSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV ::::::::::::::::. :::::::::::::::::::::::::::::: ::::::::::: gi|149 SSASSSSVVFPGGGASSTPSNANLGLLVHRRLHPGTSCPRLSPPLHMATGAGEHHLARRV 460 470 480 490 500 510 400 410 420 430 440 450 KIAA20 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV :::::::::::::::::::.::::: ::::::::::::::::::::::::::::::::: gi|149 RSDPGGGGLAYAAYANGLGTQLPGLPSSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV 520 530 540 550 560 570 460 470 480 490 500 KIAA20 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS ::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS 580 590 600 610 620 >>gi|194206214|ref|XP_001915985.1| PREDICTED: mex-3 homo (574 aa) initn: 1757 init1: 1757 opt: 3203 Z-score: 2786.1 bits: 525.2 E(): 1.7e-146 Smith-Waterman score: 3203; 95.591% identity (97.996% similar) in 499 aa overlap (8-501:77-574) 10 20 30 KIAA20 WACLSLSPTPSS--APWFVG---CKIKALRAKTNTYI :.::: . .:: :::::::::::::: gi|194 LSLLGLDSDEGASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYI 50 60 70 80 90 100 40 50 60 70 80 90 KIAA20 KTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ 110 120 130 140 150 160 100 110 120 130 140 150 KIAA20 TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREE 170 180 190 200 210 220 160 170 180 190 200 210 KIAA20 IEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 IEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKP 230 240 250 260 270 280 220 230 240 250 260 270 KIAA20 FSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGY : :::::::::::::::::::::::..::::: ::::::::::::::::::::::::::: gi|194 FCSYRNDSSSSLGSASTDSYFGGGTGGSAAATPRLADYSPPSPALSFAHNGNNNNNGNGY 290 300 310 320 330 340 280 290 300 310 320 330 KIAA20 TYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSA ::.:: :::::::::::::::::::::::::::::.:::::::::::::::.:::::::: gi|194 TYAAG-EASVPSPDGCPELQPTFDPAPAPPPGAPLLWAQFERSPGGGPAAPASSSCSSSA 350 360 370 380 390 400 340 350 360 370 380 390 KIAA20 SSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|194 SSSASSSSVVFPGGGAGAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV 410 420 430 440 450 460 400 410 420 430 440 450 KIAA20 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV :::::::::::::.:::::.:::::::::::::::::::::::::::::::::::::::: gi|194 RSDPGGGGLAYAAFANGLGSQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSV 470 480 490 500 510 520 460 470 480 490 500 KIAA20 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS ::::::::::::::::::::::::::::::::::::::.:::::::::: gi|194 CFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHAAVTQAIRIFS 530 540 550 560 570 501 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Fri Mar 6 09:23:45 2009 done: Fri Mar 6 09:27:43 2009 Total Scan time: 1481.870 Total Display time: 0.210 Function used was FASTA [version 34.26.5 April 26, 2007]