# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/bj00176.fasta.nr -Q ../query/KIAA2001.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA2001, 689 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7809855 sequences Expectation_n fit: rho(ln(x))= 6.9185+/-0.000219; mu= 6.4889+/- 0.012 mean_var=197.7845+/-37.406, 0's: 46 Z-trim: 83 B-trim: 8 in 1/63 Lambda= 0.091196 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|74007773|ref|XP_549073.2| PREDICTED: similar to ( 752) 3113 422.5 2.6e-115 gi|13874446|dbj|BAB46855.1| hypothetical protein [ ( 400) 2614 356.5 1e-95 gi|50949517|emb|CAB94872.2| hypothetical protein [ ( 370) 2517 343.7 6.8e-92 gi|118572614|sp|Q5DTT4.2|RGAG4_MOUSE RecName: Full ( 599) 2124 292.3 3.4e-76 gi|149042171|gb|EDL95878.1| rCG36266 [Rattus norve ( 601) 1720 239.1 3.4e-60 gi|13810537|dbj|BAB43951.1| paternally expressed g ( 325) 375 61.8 4.3e-07 gi|119597187|gb|EAW76781.1| hCG1642748, isoform CR ( 401) 375 61.9 4.9e-07 gi|109069256|ref|XP_001085478.1| PREDICTED: simila ( 325) 371 61.3 6.2e-07 gi|172046699|sp|Q86TG7.2|PEG10_HUMAN RecName: Full ( 708) 375 62.2 7e-07 gi|73976337|ref|XP_539424.2| PREDICTED: similar to ( 379) 355 59.3 2.9e-06 gi|109473089|ref|XP_001053454.1| PREDICTED: simila ( 364) 349 58.5 4.9e-06 gi|157954422|ref|NP_001103285.1| paternally expres ( 405) 348 58.4 5.8e-06 gi|146134321|dbj|BAF57230.1| paternally expressed ( 317) 343 57.6 7.8e-06 gi|187761320|ref|NP_001120682.1| paternally expres ( 788) 348 58.7 8.8e-06 gi|194209640|ref|XP_001915670.1| PREDICTED: patern ( 765) 346 58.5 1e-05 gi|31376257|dbj|BAC77244.1| paternally expressed 1 ( 376) 341 57.4 1e-05 gi|12620394|gb|AAG60684.1|AF316578_1 gag-protease ( 704) 342 57.9 1.4e-05 gi|108885167|gb|ABC54572.3| paternally expressed 1 ( 367) 337 56.9 1.5e-05 gi|111117522|gb|ABH05669.1| paternal expression 10 ( 403) 337 56.9 1.6e-05 gi|148682032|gb|EDL13979.1| mCG64208 [Mus musculus ( 444) 337 57.0 1.7e-05 gi|172045711|sp|Q7TN75.2|PEG10_MOUSE RecName: Full ( 958) 341 57.9 1.9e-05 gi|98985814|ref|NP_570947.2| paternally expressed (1006) 341 58.0 1.9e-05 gi|187829058|ref|NP_001120696.1| paternally expres ( 758) 337 57.3 2.3e-05 gi|189522439|ref|XP_001921573.1| PREDICTED: simila ( 809) 335 57.0 2.9e-05 gi|125856055|ref|XP_001344355.1| PREDICTED: simila (1405) 338 57.7 3.2e-05 gi|125844782|ref|XP_001338974.1| PREDICTED: simila (1405) 338 57.7 3.2e-05 gi|125846290|ref|XP_001333237.1| PREDICTED: simila (1405) 337 57.6 3.5e-05 gi|109510342|ref|XP_001077205.1| PREDICTED: simila ( 234) 319 54.3 5.8e-05 gi|125839556|ref|XP_001345508.1| PREDICTED: simila (1402) 330 56.7 6.5e-05 gi|149743417|ref|XP_001488183.1| PREDICTED: simila ( 239) 313 53.5 0.0001 gi|109504425|ref|XP_001072916.1| PREDICTED: hypoth ( 145) 309 52.7 0.00011 gi|11692745|gb|AAG39979.1|AF302691_1 myelin expres ( 231) 312 53.4 0.00011 gi|109094510|ref|XP_001109357.1| PREDICTED: simila ( 239) 312 53.4 0.00011 gi|119893351|ref|XP_001253890.1| PREDICTED: simila ( 239) 312 53.4 0.00011 gi|114686883|ref|XP_515188.2| PREDICTED: leucine z ( 240) 312 53.4 0.00011 gi|74762303|sp|Q6ICC9.1|LDOCL_HUMAN RecName: Full= ( 239) 311 53.2 0.00012 gi|194383126|dbj|BAG59119.1| unnamed protein produ ( 239) 311 53.2 0.00012 gi|149264191|ref|XP_001472642.1| PREDICTED: hypoth ( 430) 315 54.1 0.00012 gi|109490763|ref|XP_001075128.1| PREDICTED: hypoth ( 204) 309 52.9 0.00013 gi|26350821|dbj|BAC39047.1| unnamed protein produc ( 188) 308 52.7 0.00014 gi|109498257|ref|XP_001071266.1| PREDICTED: hypoth ( 168) 307 52.5 0.00014 gi|81887340|sp|Q505G4.1|LDOCL_MOUSE RecName: Full= ( 243) 308 52.9 0.00016 gi|57093059|ref|XP_538334.1| PREDICTED: similar to ( 239) 307 52.7 0.00017 gi|115687243|ref|XP_001197893.1| PREDICTED: hypoth ( 290) 308 52.9 0.00018 gi|109500077|ref|XP_001070623.1| PREDICTED: hypoth ( 160) 303 52.0 0.00019 gi|109465686|ref|XP_001065784.1| PREDICTED: hypoth ( 219) 303 52.1 0.00024 gi|194238868|ref|XP_001917057.1| PREDICTED: hypoth ( 456) 307 53.1 0.00026 gi|109478380|ref|XP_001054777.1| PREDICTED: hypoth ( 265) 303 52.2 0.00027 gi|115931431|ref|XP_001185218.1| PREDICTED: simila ( 574) 308 53.3 0.00028 gi|109481106|ref|XP_235542.4| PREDICTED: similar t ( 243) 302 52.1 0.00028 >>gi|74007773|ref|XP_549073.2| PREDICTED: similar to ret (752 aa) initn: 2770 init1: 2333 opt: 3113 Z-score: 2226.3 bits: 422.5 E(): 2.6e-115 Smith-Waterman score: 3113; 78.415% identity (90.388% similar) in 593 aa overlap (99-689:168-752) 70 80 90 100 110 120 KIAA20 SPRWVWPGLSRAPLPHFGPSRAPPPHFGLLRPPVAPVPLSPPRSPRAPGLVEMSEASGNL :: .: . . . :::: :. ::::.::: gi|740 STLGGLPEERNTFTGCRHDDLEWAVAVAFSRPELAAAREGESQ-PRAPELILMSEAAGNL 140 150 160 170 180 190 130 140 150 160 170 180 KIAA20 NSLRMANVALREELNALRGENANLGLQLGRALAEVNSLRGNVSSYIRWPVPIVPVLAEEN :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|740 NSLRMANVALREELNALRGENANLGLQLGRALAEVNSLRGNVSSYIRWPVPVVPVLAEEN 200 210 220 230 240 250 190 200 210 220 230 240 KIAA20 LEFALSEIEVIPGGELPFLCRPPPRAEPDCISDDLLINVIQDRSTPDGPADPPLLPIPPP .:: ::::...: ::::::: :::::::. ::.:::.:::: :: :.:.::: :::::: gi|740 FEFPLSEIDAVPEGELPFLCWPPPRAEPEYASDELLISVIQDCSTSDAPVDPPPLPIPPP 260 270 280 290 300 310 250 260 270 280 290 300 KIAA20 PALPPPASKEPPPQPPLAPLERPEIEPFSGDPVYLAEFLMQLETFIADHEVHFPGGAERV ::::: .:: :::::: ::::::.::::::::::::::::::::::::: ::::::::: gi|740 LALPPPPAKELPPQPPLPPLERPELEPFSGDPVYLAEFLMQLETFIADHEDHFPGGAERV 320 330 340 350 360 370 310 320 330 340 350 360 KIAA20 AFLISFFTGEAKDWAISVTQEGSPLHANFPRFLDEIRKEFCGPIPPRVAKKAIRKLKQGH :::::::.:::::::::::.:::::.:::::::::::::::::::: :::::::::::: gi|740 AFLISFFAGEAKDWAISVTREGSPLRANFPRFLDEIRKEFCGPIPPSVAKKAIRKLKQGD 380 390 400 410 420 430 370 380 390 400 410 420 KIAA20 CTLGSYADAFQFLAQFLSWDDCRLQNQFLKGLSEFFRKELLWSTEMADLDELILECVEIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 CTLGSYADAFQFLAQFLSWDDCRLQNQFLKGLSEFFRKELLWSTEMADLDELILECVEIE 440 450 460 470 480 490 430 440 450 460 470 480 KIAA20 RKVRVPKPIPLPGVRNIIFPFAPSPNEEESEDEEYYSEDEDQEARRHRLHSKDQRKRMRA :::::::::::::::::.:::: .::...:.:::::: :::.:.::.::....::.:::: gi|740 RKVRVPKPIPLPGVRNIFFPFAADPNNDDSDDEEYYS-DEDEETRRRRLYDREQRRRMRA 500 510 520 530 540 550 490 500 510 520 530 540 KIAA20 FQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEE--EGESKDEEDE .::: .:.::.. :.::. ::.:: .....:::..:..:: .:.:.:: : ...::::: gi|740 IQQEAREEEEKRKKEEEKRKKQEEMRKKQQEEMRKKQQEE-MRKKQEEKEEEDDEDEEDE 560 570 580 590 600 610 550 560 570 580 590 600 KIAA20 DEDGGQKPEGEPQQDPGTEETYGEVEEEPLDEAQDDDLDELMEMEPTFVHASSQTSGPTS ::. :.. :. :: .: : : : ::.:::::::.:::::: .:::::: . gi|740 DENKGERLGPLPEPDPD-QEPEPEPEPESEDETQDDDLDEMMEMEPTVAHASSQT----T 620 630 640 650 660 610 620 630 640 650 660 KIAA20 GYHAENFLGASPPIIQPSRRRNQNRVPLLEGLPGTNSPFYSSPQLIRRTGRLGQRQVRRR :.. :::: :::::::::::::::::::::::::::::::::: ::::.:::::::.::: gi|740 GFYHENFLDASPPIIQPSRRRNQNRVPLLEGLPGTNSPFYSSPPLIRRAGRLGQRQIRRR 670 680 690 700 710 720 670 680 KIAA20 PPVLFRLTPRQGGHRAARGRIRV ::::::::::::::::::::::: gi|740 PPVLFRLTPRQGGHRAARGRIRV 730 740 750 >>gi|13874446|dbj|BAB46855.1| hypothetical protein [Maca (400 aa) initn: 1526 init1: 1526 opt: 2614 Z-score: 1874.6 bits: 356.5 E(): 1e-95 Smith-Waterman score: 2614; 96.269% identity (98.259% similar) in 402 aa overlap (288-689:1-400) 260 270 280 290 300 310 KIAA20 EPPPQPPLAPLERPEIEPFSGDPVYLAEFLMQLETFIADHEVHFPGGAERVAFLISFFTG ::::::::::: :::::::::::::::::: gi|138 MQLETFIADHEDHFPGGAERVAFLISFFTG 10 20 30 320 330 340 350 360 370 KIAA20 EAKDWAISVTQEGSPLHANFPRFLDEIRKEFCGPIPPRVAKKAIRKLKQGHCTLGSYADA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|138 EAKDWAISVTQEGSPLHANFPRFLDEIRKEFCGPIPPRVAKKAIRKLKQGHCTLGSYADA 40 50 60 70 80 90 380 390 400 410 420 430 KIAA20 FQFLAQFLSWDDCRLQNQFLKGLSEFFRKELLWSTEMADLDELILECVEIERKVRVPKPI :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|138 FQFLAQFLSWDDCHLQNQFLKGLSEFFRKELLWSTEMADLDELILECVEIERKVRVPKPI 100 110 120 130 140 150 440 450 460 470 480 490 KIAA20 PLPGVRNIIFPFAPSPNEEESEDEEYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKE ::::::::.:::: :::::::::::::::::::: ::::: ::::.::::::::::::: gi|138 PLPGVRNILFPFA--PNEEESEDEEYYSEDEDQEACRHRLHPKDQRNRMRAFQQEMKEKE 160 170 180 190 200 500 510 520 530 540 550 KIAA20 EEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDEEDEDEDGGQKPEGE ::::::::::::.::..::::::::::::::::::::::::::::::::::::::::: : gi|138 EEEMKKEEEMKKEEEEKEEEEEEMKQKEEEEEIRNKNEEEGESKDEEDEDEDGGQKPERE 210 220 230 240 250 260 560 570 580 590 600 610 KIAA20 PQQDPGTEETYGEVEEEPLDEAQDDDLDELMEMEPTFVHASSQTSGPTSGYHAENFLGAS :::.::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|138 PQQEPGTEETYGEVEEEPLDEAQDDDLDELMEMEPTFVHASSQTSGPTNGYHAENFLGAS 270 280 290 300 310 320 620 630 640 650 660 670 KIAA20 PPIIQPSRRRNQNRVPLLEGLPGTNSPFYSSPQLIRRTGRLGQRQVRRRPPVLFRLTPRQ :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: gi|138 PPIIQPSRRRNQNRVPLLEGLPGTNSPFYSSPPLIRRTGRLGQRQVRRRPPVLFRLTPRQ 330 340 350 360 370 380 680 KIAA20 GGHRAARGRIRV :::::::::::: gi|138 GGHRAARGRIRV 390 400 >>gi|50949517|emb|CAB94872.2| hypothetical protein [Homo (370 aa) initn: 2517 init1: 2517 opt: 2517 Z-score: 1806.0 bits: 343.7 E(): 6.8e-92 Smith-Waterman score: 2517; 100.000% identity (100.000% similar) in 370 aa overlap (320-689:1-370) 290 300 310 320 330 340 KIAA20 LETFIADHEVHFPGGAERVAFLISFFTGEAKDWAISVTQEGSPLHANFPRFLDEIRKEFC :::::::::::::::::::::::::::::: gi|509 KDWAISVTQEGSPLHANFPRFLDEIRKEFC 10 20 30 350 360 370 380 390 400 KIAA20 GPIPPRVAKKAIRKLKQGHCTLGSYADAFQFLAQFLSWDDCRLQNQFLKGLSEFFRKELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 GPIPPRVAKKAIRKLKQGHCTLGSYADAFQFLAQFLSWDDCRLQNQFLKGLSEFFRKELL 40 50 60 70 80 90 410 420 430 440 450 460 KIAA20 WSTEMADLDELILECVEIERKVRVPKPIPLPGVRNIIFPFAPSPNEEESEDEEYYSEDED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 WSTEMADLDELILECVEIERKVRVPKPIPLPGVRNIIFPFAPSPNEEESEDEEYYSEDED 100 110 120 130 140 150 470 480 490 500 510 520 KIAA20 QEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 QEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEE 160 170 180 190 200 210 530 540 550 560 570 580 KIAA20 IRNKNEEEGESKDEEDEDEDGGQKPEGEPQQDPGTEETYGEVEEEPLDEAQDDDLDELME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 IRNKNEEEGESKDEEDEDEDGGQKPEGEPQQDPGTEETYGEVEEEPLDEAQDDDLDELME 220 230 240 250 260 270 590 600 610 620 630 640 KIAA20 MEPTFVHASSQTSGPTSGYHAENFLGASPPIIQPSRRRNQNRVPLLEGLPGTNSPFYSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 MEPTFVHASSQTSGPTSGYHAENFLGASPPIIQPSRRRNQNRVPLLEGLPGTNSPFYSSP 280 290 300 310 320 330 650 660 670 680 KIAA20 QLIRRTGRLGQRQVRRRPPVLFRLTPRQGGHRAARGRIRV :::::::::::::::::::::::::::::::::::::::: gi|509 QLIRRTGRLGQRQVRRRPPVLFRLTPRQGGHRAARGRIRV 340 350 360 370 >>gi|118572614|sp|Q5DTT4.2|RGAG4_MOUSE RecName: Full=Ret (599 aa) initn: 2112 init1: 1569 opt: 2124 Z-score: 1524.2 bits: 292.3 E(): 3.4e-76 Smith-Waterman score: 2527; 66.277% identity (81.469% similar) in 599 aa overlap (121-689:1-599) 100 110 120 130 140 150 KIAA20 PPPHFGLLRPPVAPVPLSPPRSPRAPGLVEMSEASGNLNSLRMANVALREELNALRGENA ::::.:::::::.::::::::::::::::. gi|118 MSEAAGNLNSLRLANVALREELNALRGENV 10 20 30 160 170 180 190 200 KIAA20 NLGLQLGRALAEVNSLRGNVSSYIRWPVPIVPVLAEENLEFALSEIEVIPGGE------L .::::::::::::::::::::::::::.::::::::::.:: :.: . : : . gi|118 QLGLQLGRALAEVNSLRGNVSSYIRWPMPIVPVLAEENFEFLLNETDPTPEEEEEEEEEV 40 50 60 70 80 90 210 220 230 240 250 260 KIAA20 PFLCRPPPRAEPDCISDDLLINVIQDRSTPDGPADPPLLPIPPPPALPPPASKEPPPQPP :::: ::::..:. .::::::::.:: ..::: .:::: : : : : : ::: . gi|118 PFLCWPPPRTDPEYVSDDLLINVVQDYTNPDGSSDPPLSPSPSQPELHSPMLKEPTFEFL 100 110 120 130 140 150 270 280 290 300 310 320 KIAA20 LAPLERPEIEPFSGDPVYLAEFLMQLETFIADHEVHFPGGAERVAFLISFFTGEAKDWAI : :::::.:::::::::::::::::::::::::: ::::::::::::::::::::.:::: gi|118 LPPLERPDIEPFSGDPVYLAEFLMQLETFIADHEDHFPGGAERVAFLISFFTGEARDWAI 160 170 180 190 200 210 330 340 350 360 370 380 KIAA20 SVTQEGSPLHANFPRFLDEIRKEFCGPIPPRVAKKAIRKLKQGHCTLGSYADAFQFLAQF ::::::: ::::::::::::::::::::: :::::::::::::.:::::::::::::::: gi|118 SVTQEGSSLHANFPRFLDEIRKEFCGPIPSRVAKKAIRKLKQGNCTLGSYADAFQFLAQF 220 230 240 250 260 270 390 400 410 420 430 440 KIAA20 LSWDDCRLQNQFLKGLSEFFRKELLWSTEMADLDELILECVEIERKVRVPKPIPLPGVRN ::::::::::::::::::.::::::::::.:::::::::::.::::::::: : ::.: gi|118 LSWDDCRLQNQFLKGLSEIFRKELLWSTEVADLDELILECVKIERKVRVPKTASLTGVQN 280 290 300 310 320 330 450 460 470 480 490 500 KIAA20 IIFPFAPSPNEEESEDEEYYSEDEDQ--EARRHRLHSKDQRKRMRAFQQEMKEKEEEEMK ::: :::.:.: :.:::.: . :: .::. ::::..: :: :::.:.::: : gi|118 SCCPFALIPNEDENEGVEFYSENEGEGEEAGGYRLYLKDQRQHMTAFPQEMREEEEEMRK 340 350 360 370 380 390 510 520 530 540 550 560 KIAA20 KEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDEEDE--DEDGGQKPEGEPQQ .:.::. .:...:.:. :.....:... ....::: : .:.:.: .::. .. : .. gi|118 EEDEMEDEEDEDEDEDYEFEEEDEDDDDEEEEEEEEEEEDKEEEMKNEDSDENKYEEEDE 400 410 420 430 440 450 570 580 590 600 KIAA20 ------DPGTEETYGEVEEEPLD------------EAQDDDLD-ELMEM-EPTFVHASSQ .: :. :.:.: . :. : ::: : ::..: .:.: gi|118 VIVRVLEPEQEQEREEIEHEHVYVHEHIHAHVHTLAAHHHGLHGELMVMDEPVLVDTSTQ 460 470 480 490 500 510 610 620 630 640 650 660 KIAA20 TSGPTSGYHAENFLGASPPIIQPSRRRNQNRVPLLEGLPGTNSPFYSSPQLIRRTGRLGQ : . . ::::::.::.:: ... ::.:.::::::::::::::: ::: : :.:..::::: gi|118 TISSAIGYHAENYLGVSPSVMHSSRQRSQNRVPLLEGLPGTNSSFYSPPPLMRHAGRLGQ 520 530 540 550 560 570 670 680 KIAA20 RQVRRRPPVLFRLTPRQGGHRAARGRIRV ::.:: : ::: ::::::::::..::::: gi|118 RQMRRCPSVLFCLTPRQGGHRATQGRIRV 580 590 >>gi|149042171|gb|EDL95878.1| rCG36266 [Rattus norvegicu (601 aa) initn: 1973 init1: 1550 opt: 1720 Z-score: 1236.9 bits: 239.1 E(): 3.4e-60 Smith-Waterman score: 2534; 66.389% identity (81.032% similar) in 601 aa overlap (121-689:1-601) 100 110 120 130 140 150 KIAA20 PPPHFGLLRPPVAPVPLSPPRSPRAPGLVEMSEASGNLNSLRMANVALREELNALRGENA ::::.:::::::.::::::::::::::::. gi|149 MSEAAGNLNSLRLANVALREELNALRGENV 10 20 30 160 170 180 190 200 KIAA20 NLGLQLGRALAEVNSLRGNVSSYIRWPVPIVPVLAEENLEFALSEIEVIPGGE------- .::::::::::::::::::::::.::::::::::::::.:: :.: . : : gi|149 QLGLQLGRALAEVNSLRGNVSSYVRWPVPIVPVLAEENFEFLLNETDPTPEEEEEEEEEE 40 50 60 70 80 90 210 220 230 240 250 260 KIAA20 --LPFLCRPPPRAEPDCISDDLLINVIQDRSTPDGPADPPLLPIPPPPALPPPASKEPPP .:::: ::::..:. .::::::::.:: ..::: .:::: : : : : :::: gi|149 EEVPFLCWPPPRTDPEYVSDDLLINVVQDYTNPDGSSDPPLSPSLSQPELHSPMSKEPTV 100 110 120 130 140 150 270 280 290 300 310 320 KIAA20 QPPLAPLERPEIEPFSGDPVYLAEFLMQLETFIADHEVHFPGGAERVAFLISFFTGEAKD . : :::::.:::::::::::::::::::::::::: ::::::.:::::::::::::.. gi|149 EFLLPPLERPDIEPFSGDPVYLAEFLMQLETFIADHEEHFPGGADRVAFLISFFTGEARE 160 170 180 190 200 210 330 340 350 360 370 380 KIAA20 WAISVTQEGSPLHANFPRFLDEIRKEFCGPIPPRVAKKAIRKLKQGHCTLGSYADAFQFL :::::::::: ::::::::::::::::::::: :::::::::::::.::::::::::::: gi|149 WAISVTQEGSSLHANFPRFLDEIRKEFCGPIPSRVAKKAIRKLKQGNCTLGSYADAFQFL 220 230 240 250 260 270 390 400 410 420 430 440 KIAA20 AQFLSWDDCRLQNQFLKGLSEFFRKELLWSTEMADLDELILECVEIERKVRVPKPIPLPG :::::::::::::::::::::::::::::::::::::::::::.::::::::::: ::. gi|149 AQFLSWDDCRLQNQFLKGLSEFFRKELLWSTEMADLDELILECIEIERKVRVPKPASLPA 280 290 300 310 320 330 450 460 470 480 490 KIAA20 VRNIIFPFAPSPNEEESEDEEYYSEDE--DQEARRHRLHSKDQRKRMRAFQQEMKEKEEE :.: ::. ::.:.: .:::.: ..:: :.:. ::.::.:.:: .::...::. gi|149 VQNSCCPFTLISNEDENEGVAFYSENEGDSEEAGGHELYLKDHRKHMKAFPEEMRDEEED 340 350 360 370 380 390 500 510 520 530 540 550 KIAA20 EMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDEE---DEDEDGGQKPEG :.::::. .:...:. :.: ....:::. ...::: :.:.:: .:: : .. : gi|149 MRKEEEEMEDEEDEDEDYEDEEEDEDEEEDEDEEEEEEEEDKEEEMMKNEDSDENKYEED 400 410 420 430 440 450 560 570 580 590 KIAA20 EPQ----QDPGTEETYGEVEEEPLD------------EAQDDDLD-ELMEM-EPTFVHAS . : :. :.:.: . :. : ::: : ::..: .: gi|149 DEVIVRVLDSEQEQEREEIEHEHVYVHEHIHAHMHALAAHHHGLHGELMVMDEPVLVDTS 460 470 480 490 500 510 600 610 620 630 640 650 KIAA20 SQTSGPTSGYHAENFLGASPPIIQPSRRRNQNRVPLLEGLPGTNSPFYSSPQLIRRTGRL .:: . . ::::::.::.::::. .:.::::::::::::::::: ::::: :::..::: gi|149 TQTISSAIGYHAENYLGVSPPIMPSGRQRNQNRVPLLEGLPGTNSSFYSSPPLIRHAGRL 520 530 540 550 560 570 660 670 680 KIAA20 GQRQVRRRPPVLFRLTPRQGGHRAARGRIRV :.::.:::: ::: :.::::::::..::::: gi|149 GHRQMRRRPSVLFCLSPRQGGHRATQGRIRV 580 590 600 >>gi|13810537|dbj|BAB43951.1| paternally expressed gene (325 aa) initn: 450 init1: 346 opt: 375 Z-score: 283.6 bits: 61.8 E(): 4.3e-07 Smith-Waterman score: 375; 30.472% identity (58.369% similar) in 233 aa overlap (255-478:67-293) 230 240 250 260 270 280 KIAA20 INVIQDRSTPDGPADPPLLPIPPPPALPPPASKEPPPQPPLAPLERPEIEPFSGDPVYLA :. ::: : . : : :.:.: .:: gi|138 LTEENTTLREQVEPTPEDEDDDIELRGAAAAAAPPPPIEEECPEDLP--EKFDGNPDMLA 40 50 60 70 80 90 290 300 310 320 330 340 KIAA20 EFLMQLETFIADHEVHFPGGAERVAFLISFFTGEAKDWAISVTQEGSPLHANFPRFLDEI :. : . :. : :: :. :..::.: :: . ... : :.: :. :. gi|138 PFMAQCQIFMEKSTRDFSVDRVRVCFVTSMMTGRAARWASAKLERSHYLMHNYPAFMMEM 100 110 120 130 140 150 350 360 370 380 390 400 KIAA20 RKEFCGPIPPRVAKKAIRKLKQGHCTLGSYADAFQFLAQFLSWDDCRLQNQFLKGLSEFF .. : : .:::. ::.:.:: .. .:..:::..:: :.:.. : .:. .:::. . gi|138 KHVFEDPQRREVAKRKIRRLRQGMGSVIDYSNAFQMIAQDLDWNEPALIDQYHEGLSDHI 160 170 180 190 200 210 410 420 430 440 450 KIAA20 RKELLWSTEMADLDELILECVEIERKV------RVPKPIPLPGVRNIIFPFAPSPNEEES ..:: .:. :: .:..:::.. : :. : : ...: : .. . gi|138 QEELSHLEVAKSLSALIGQCIHIERRLARAAAARKPRSPP----RALVLPHIASHHQVDP 220 230 240 250 260 270 460 470 480 490 500 510 KIAA20 EDE---EYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEE . . .... ::..:. gi|138 TEPVGGARMRLTQEEKERRRKLNLCLYCGTGGHYADNCPAKASKSSPAGNSPAPL 280 290 300 310 320 >>gi|119597187|gb|EAW76781.1| hCG1642748, isoform CRA_b (401 aa) initn: 400 init1: 346 opt: 375 Z-score: 282.5 bits: 61.9 E(): 4.9e-07 Smith-Waterman score: 375; 30.472% identity (58.369% similar) in 233 aa overlap (255-478:143-369) 230 240 250 260 270 280 KIAA20 INVIQDRSTPDGPADPPLLPIPPPPALPPPASKEPPPQPPLAPLERPEIEPFSGDPVYLA :. ::: : . : : :.:.: .:: gi|119 LTEENTTLREQVEPTPEDEDDDIELRGAAAAAAPPPPIEEECPEDLP--EKFDGNPDMLA 120 130 140 150 160 170 290 300 310 320 330 340 KIAA20 EFLMQLETFIADHEVHFPGGAERVAFLISFFTGEAKDWAISVTQEGSPLHANFPRFLDEI :. : . :. : :: :. :..::.: :: . ... : :.: :. :. gi|119 PFMAQCQIFMEKSTRDFSVDRVRVCFVTSMMTGRAARWASAKLERSHYLMHNYPAFMMEM 180 190 200 210 220 230 350 360 370 380 390 400 KIAA20 RKEFCGPIPPRVAKKAIRKLKQGHCTLGSYADAFQFLAQFLSWDDCRLQNQFLKGLSEFF .. : : .:::. ::.:.:: .. .:..:::..:: :.:.. : .:. .:::. . gi|119 KHVFEDPQRREVAKRKIRRLRQGMGSVIDYSNAFQMIAQDLDWNEPALIDQYHEGLSDHI 240 250 260 270 280 290 410 420 430 440 450 KIAA20 RKELLWSTEMADLDELILECVEIERKV------RVPKPIPLPGVRNIIFPFAPSPNEEES ..:: .:. :: .:..:::.. : :. : : ...: : .. . gi|119 QEELSHLEVAKSLSALIGQCIHIERRLARAAAARKPRSPP----RALVLPHIASHHQVDP 300 310 320 330 340 460 470 480 490 500 510 KIAA20 EDE---EYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEE . . .... ::..:. gi|119 TEPVGGARMRLTQEEKERRRKLNLCLYCGTGGHYADNCPAKASKSSPAGNSPAPL 350 360 370 380 390 400 >>gi|109069256|ref|XP_001085478.1| PREDICTED: similar to (325 aa) initn: 468 init1: 341 opt: 371 Z-score: 280.7 bits: 61.3 E(): 6.2e-07 Smith-Waterman score: 371; 30.043% identity (58.798% similar) in 233 aa overlap (255-478:67-293) 230 240 250 260 270 280 KIAA20 INVIQDRSTPDGPADPPLLPIPPPPALPPPASKEPPPQPPLAPLERPEIEPFSGDPVYLA :. ::: : . : : :.:.: .:: gi|109 LTEENTTLREQVEPTPEDDDDDIELRGAAAAAAPPPPIEEECPEDLP--EKFDGNPDMLA 40 50 60 70 80 90 290 300 310 320 330 340 KIAA20 EFLMQLETFIADHEVHFPGGAERVAFLISFFTGEAKDWAISVTQEGSPLHANFPRFLDEI :. : . :. : :: :. :..::.: :: . ... : :.: :. :. gi|109 PFMAQCQIFMEKSTRDFSVDRVRVCFVTSMMTGRAARWASAKLERSHYLMHNYPAFMMEM 100 110 120 130 140 150 350 360 370 380 390 400 KIAA20 RKEFCGPIPPRVAKKAIRKLKQGHCTLGSYADAFQFLAQFLSWDDCRLQNQFLKGLSEFF .. : : ..::. ::.:.:: .. .:..:::..:: :.:.. : .:. .:::. . gi|109 KHVFEDPQRREAAKRKIRRLRQGMGSVIDYSNAFQMIAQDLDWNEPALIDQYHEGLSDHI 160 170 180 190 200 210 410 420 430 440 450 KIAA20 RKELLWSTEMADLDELILECVEIERKV------RVPKPIPLPGVRNIIFPFAPSPNEEES ..:: .:. :: .:..:::.. : :. : : ...: . : .. . gi|109 QEELSHLEVAKSLSALIGQCIHIERRLARAAAARKPRSPP----RALVLPHVASHHQVDP 220 230 240 250 260 270 460 470 480 490 500 510 KIAA20 EDE---EYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEE . . .... ::..:. gi|109 TEPVGGARMRLTQEEKERRRKLNLCLYCGTGGHYADNCPAKASKSSPAGNSPAPL 280 290 300 310 320 >>gi|172046699|sp|Q86TG7.2|PEG10_HUMAN RecName: Full=Ret (708 aa) initn: 346 init1: 346 opt: 375 Z-score: 279.7 bits: 62.2 E(): 7e-07 Smith-Waterman score: 375; 30.472% identity (58.369% similar) in 233 aa overlap (255-478:67-293) 230 240 250 260 270 280 KIAA20 INVIQDRSTPDGPADPPLLPIPPPPALPPPASKEPPPQPPLAPLERPEIEPFSGDPVYLA :. ::: : . : : :.:.: .:: gi|172 LTEENTTLREQVEPTPEDEDDDIELRGAAAAAAPPPPIEEECPEDLP--EKFDGNPDMLA 40 50 60 70 80 90 290 300 310 320 330 340 KIAA20 EFLMQLETFIADHEVHFPGGAERVAFLISFFTGEAKDWAISVTQEGSPLHANFPRFLDEI :. : . :. : :: :. :..::.: :: . ... : :.: :. :. gi|172 PFMAQCQIFMEKSTRDFSVDRVRVCFVTSMMTGRAARWASAKLERSHYLMHNYPAFMMEM 100 110 120 130 140 150 350 360 370 380 390 400 KIAA20 RKEFCGPIPPRVAKKAIRKLKQGHCTLGSYADAFQFLAQFLSWDDCRLQNQFLKGLSEFF .. : : .:::. ::.:.:: .. .:..:::..:: :.:.. : .:. .:::. . gi|172 KHVFEDPQRREVAKRKIRRLRQGMGSVIDYSNAFQMIAQDLDWNEPALIDQYHEGLSDHI 160 170 180 190 200 210 410 420 430 440 450 KIAA20 RKELLWSTEMADLDELILECVEIERKV------RVPKPIPLPGVRNIIFPFAPSPNEEES ..:: .:. :: .:..:::.. : :. : : ...: : .. . gi|172 QEELSHLEVAKSLSALIGQCIHIERRLARAAAARKPRSPP----RALVLPHIASHHQVDP 220 230 240 250 260 270 460 470 480 490 500 510 KIAA20 EDE---EYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEE . . .... ::..:. gi|172 TEPVGGARMRLTQEEKERRRKLNLCLYCGTGGHYADNCPAKASKSSPAGKLPGPAVEGPS 280 290 300 310 320 330 >>gi|73976337|ref|XP_539424.2| PREDICTED: similar to pat (379 aa) initn: 352 init1: 278 opt: 355 Z-score: 268.6 bits: 59.3 E(): 2.9e-06 Smith-Waterman score: 355; 29.185% identity (57.511% similar) in 233 aa overlap (255-478:121-347) 230 240 250 260 270 280 KIAA20 INVIQDRSTPDGPADPPLLPIPPPPALPPPASKEPPPQPPLAPLERPEIEPFSGDPVYLA :. : : : . : : :.:.: .:. gi|739 LTEENTSLREQVEPAPQDEEDDLELRGAAAAAAPPTPLEEECPDDLP--EKFDGNPDMLV 100 110 120 130 140 290 300 310 320 330 340 KIAA20 EFLMQLETFIADHEVHFPGGAERVAFLISFFTGEAKDWAISVTQEGSPLHANFPRFLDEI :. : . :. : :: :. :..::.: :: . ... : :.: :. :. gi|739 PFMAQCQLFMEKSTRDFSVDRVRVCFVTSMMTGRAARWASAKLERSHYLMHNYPAFMTEM 150 160 170 180 190 200 350 360 370 380 390 400 KIAA20 RKEFCGPIPPRVAKKAIRKLKQGHCTLGSYADAFQFLAQFLSWDDCRLQNQFLKGLSEFF .. : : ..::. ::.:.:: .. .:..:::..:: :.:.. : .:. .:::. . gi|739 KHVFEDPQRREAAKRKIRRLRQGMGSVIDYSNAFQMIAQDLDWNEPALIDQYHEGLSDHI 210 220 230 240 250 260 410 420 430 440 450 KIAA20 RKELLWSTEMADLDELILECVEIERKV------RVPKPIPLPGVRNIIFPFAPSPNEEES . :: .:. :: .:..:::.. : :. : : ...: : .. . gi|739 QAELSRLEVAKSLSALIGQCIHIERRLARAAAARKPRSPP----RALVLPHITSHHQVDP 270 280 290 300 310 320 460 470 480 490 500 510 KIAA20 EDE---EYYSEDEDQEARRHRLHSKDQRKRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEE . . .... ::..:. gi|739 TEPVGGARMRLTQEEKERRRKLNLCLYCGNGGHYADNCPAKASKASPAGNSPAPL 330 340 350 360 370 689 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Fri Mar 6 08:51:30 2009 done: Fri Mar 6 08:55:28 2009 Total Scan time: 1652.830 Total Display time: 0.180 Function used was FASTA [version 34.26.5 April 26, 2007]