hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18413903/chunk_1/iprscan-20080502-18413903.nocrc
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Query sequence: KIAA1996
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00887.9.fs Acyl CoA binding protein                        50.6    7.6e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00887.9.fs   1/1      13    43 ..    59    89 .]    50.6  7.6e-14

Alignments of top-scoring domains:
PF00887.9.fs: domain 1 of 1, from 13 to 43: score 50.6, E = 7.6e-14
                   *->WDAWnelkGmSkeeAmkaYIakVeeLiakya<-*
                      WDAW++l++m+keeAm+aY+++++++i++++   
    KIAA1996    13    WDAWSSLGDMTKEEAMIAYVEEMKKIIETMP    43   

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