hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18350182/chunk_1/iprscan-20080502-18350182.nocrc
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Query sequence: KIAA1992
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00028                                                 162.6    3.9e-44  15

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00028    1/15     29    62 ..     1    34 []    11.9       22
SM00028    2/15     63    96 ..     1    34 []     7.0       80
SM00028    3/15    100   133 ..     1    34 []     6.7       86
SM00028    4/15    191   224 ..     1    34 []     0.2  4.8e+02
SM00028    5/15    259   292 ..     1    34 []    28.2   0.0012
SM00028    6/15    293   326 ..     1    34 []    15.3      8.7
SM00028    7/15    327   359 ..     1    34 []     7.1       78
SM00028    8/15    368   401 ..     1    34 []    16.4        4
SM00028    9/15    421   454 ..     1    34 []    21.5     0.12
SM00028   10/15    455   488 ..     1    34 []     4.3  1.6e+02
SM00028   11/15    489   522 ..     1    34 []     8.9       49
SM00028   12/15    560   592 ..     1    34 []     1.5  3.4e+02
SM00028   13/15    694   727 ..     1    34 []     1.2  3.7e+02
SM00028   14/15    734   767 ..     1    34 []    21.5     0.12
SM00028   15/15    803   836 ..     1    34 []    10.9       29

Alignments of top-scoring domains:
SM00028: domain 1 of 15, from 29 to 62: score 11.9, E = 22
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                       ++ + ++ + ++ gd++ A + ++ +Le++P++   
    KIAA1992    29    LQTVFLIAKVKYLSGDIEAAFNNLQHCLEHNPSY    62   

SM00028: domain 2 of 15, from 63 to 96: score 7.0, E = 80
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      a+a++ l+++yl++++ + + + +e +L+ d +    
    KIAA1992    63    ADAHLLLAQVYLSQEKVKLCSQSLELCLSYDFKV    96   

SM00028: domain 3 of 15, from 100 to 133: score 6.7, E = 86
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      + +++ ++++  k+g++++Ai+ +  A++l       
    KIAA1992   100    PLYHLIKAQSQKKMGEIADAIKTLHMAMSLPGMK    133  

SM00028: domain 4 of 15, from 191 to 224: score 0.2, E = 4.8e+02
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      +++    + + l++gd++ A+  ++ + + +P +   
    KIAA1992   191    VRVTIANADLALAQGDIERALSILQNVTAEQPYF    224  

SM00028: domain 5 of 15, from 259 to 292: score 28.2, E = 0.0012
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      ++ ++ lG ay++  + +eAi +ye+AL  +P++   
    KIAA1992   259    PRSFLLLGDAYMNILEPEEAIVAYEQALNQNPKD    292  

SM00028: domain 6 of 15, from 293 to 326: score 15.3, E = 8.7
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                          + +G a+ k  +y +Ai yye AL+   +n   
    KIAA1992   293    GTLASKMGKALIKTHNYSMAITYYEAALKTGQKN    326  

SM00028: domain 7 of 15, from 327 to 359: score 7.1, E = 78
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                         +y l++++lkl+ yd+A++ ++ AL+++P n   
    KIAA1992   327    -YLCYDLAELLLKLKWYDKAEKVLQHALAHEPVN    359  

SM00028: domain 8 of 15, from 368 to 401: score 16.4, E = 4
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                       ++   l+ +y k++++ +Ai ++++A el+      
    KIAA1992   368    GRCQVLLAKVYSKMEKLGDAITALQQARELQARV    401  

SM00028: domain 9 of 15, from 421 to 454: score 21.5, E = 0.12
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      ae++  ++    ++ dy++Ai++y++AL + +++   
    KIAA1992   421    AEICAEIAKHSVAQRDYEKAIKFYREALVHCETD    454  

SM00028: domain 10 of 15, from 455 to 488: score 4.3, E = 1.6e+02
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                       ++ + l+ +yl++ d d ++  +   L+ d +n   
    KIAA1992   455    NKIMLELARLYLAQDDPDSCLRQCALLLQSDQDN    488  

SM00028: domain 11 of 15, from 489 to 522: score 8.9, E = 49
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                        a   ++ + +++ dy++A+ ++++ Le  P+n   
    KIAA1992   489    EAATMMMADLMFRKQDYEQAVFHLQQLLERKPDN    522  

SM00028: domain 12 of 15, from 560 to 592: score 1.5, E = 3.4e+02
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      +   y++G+ +   g+ ++A+ +++kA + d++    
    KIAA1992   560    PGFQYCKGLYLWYTGEPNDALRHFNKA-RKDRDW    592  

SM00028: domain 13 of 15, from 694 to 727: score 1.2, E = 3.7e+02
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      + al+ ++ ay+ l++   A + +++  +++ n    
    KIAA1992   694    IPALLGMATAYMILKQTPRARNQLKRIAKMNWNA    727  

SM00028: domain 14 of 15, from 734 to 767: score 21.5, E = 0.12
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                       + ++ l+ +y +  +yd+A++ ++++L++++++   
    KIAA1992   734    EKSWLLLADIYIQSAKYDMAEDLLKRCLRHNRSC    767  

SM00028: domain 15 of 15, from 803 to 836: score 10.9, E = 29
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      + + y l+  ylk ++y + i+ + ++Le  P++   
    KIAA1992   803    PAVGYKLAFNYLKAKRYVDSIDICHQVLEAHPTY    836  

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