hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18013551/chunk_1/iprscan-20080502-18013551.nocrc
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Query sequence: KIAA1972
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00449                                                 103.4    2.5e-26   1
SM00184                                                  26.0     0.0054   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00449    1/1     358   482 ..     1   145 []   103.4  2.5e-26
SM00184    1/1     527   561 ..     1    23 []    26.0   0.0054

Alignments of top-scoring domains:
SM00449: domain 1 of 1, from 358 to 482: score 103.4, E = 2.5e-26
                   *->sGkhYfEVevdtggdkghwrvGvatksvhlypfkvrrkrkggvsllG
                       G++Y+EV+v t+g    + +G+at++         +   ++++++G
    KIAA1972   358    AGVWYYEVTVVTSGV---MQIGWATRDS--------KFLNHEGYGIG 393  

                   edkgSwgyrgdggkkyhasefgeeyglpfqepgDviGcflDleaggStis
                   +d++S +y+g++   +++ ++++++++ ++e gD +G++lDl +    + 
    KIAA1972   394 DDEYSCAYDGCRQLIWYNARSKPHIHPCWKE-GDTVGFLLDLNEK--QMI 440  

                   FykNGkyLgdshilaffdvtfs..gpLyPavslgstdgGgesvrlnfGp.
                   F+ NG +L        ++v  s+  +++ a s+ s     +++++nfG +
    KIAA1972   441 FFLNGNQLP-----PEKQVFSStvSGFFAAASFMS----YQQCEFNFGAk 481  

                   p<-*
                   p   
    KIAA1972   482 P    482  

SM00184: domain 1 of 1, from 527 to 561: score 26.0, E = 0.0054
                   *->CpICle....pvvlpCgH..FCr.Ci.....CPlC<-*
                      C++C+++  ++ + pCgH++ C +C  + ++CPlC   
    KIAA1972   527    CSLCCDevadTQLKPCGHsdLCMdCAlqletCPLC    561  

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