hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18013551/chunk_1/iprscan-20080502-18013551.nocrc
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Query sequence: KIAA1972
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00622.18.fs SPRY domain                                    102.0      1e-28   1
PF00622.18.ls SPRY domain                                    103.8    4.8e-28   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00622.18.fs   1/1     358   482 ..     1   154 []   102.0    1e-28
PF00622.18.ls   1/1     358   482 ..     1   154 []   103.8  4.8e-28

Alignments of top-scoring domains:
PF00622.18.fs: domain 1 of 1, from 358 to 482: score 102.0, E = 1e-28
                   *->sGkhYfEVevdtgggepthwrvGwatksvhlppgfdlrsskrkgger
                       G++Y+EV+v t+g     +++Gwat ++              ++  
    KIAA1972   358    AGVWYYEVTVVTSGV----MQIGWATRDS----------KFLNHEGY 390  

                   llGddegswgydgsggkkyhagesgepyglpfqekgdviGcflDyeagVt
                   ++Gdde+s++ydg+++  +++ +s ++  + ++e gd++G +lD+ +   
    KIAA1972   391 GIGDDEYSCAYDGCRQLIWYNARSKPHIHPCWKE-GDTVGFLLDLNEK-Q 438  

                   isFtkNGkyLgd.sEshiyaFrnvtfdkkpggpLyPavslgsadgggeai
                   + F++NG +L  ++     +F+  t +     +++ a s+ s     +++
    KIAA1972   439 MIFFLNGNQLPPeK----QVFS-STVS-----GFFAAASFMS----YQQC 474  

                   rlnfgqlp<-*
                   ++nfg +p   
    KIAA1972   475 EFNFGAKP    482  

PF00622.18.ls: domain 1 of 1, from 358 to 482: score 103.8, E = 4.8e-28
                   *->sGkhYfEVevdtgggepthwrvGwatksvhlppgfdlrsskrkgger
                       G++Y+EV+v t+g     +++Gwat ++              ++  
    KIAA1972   358    AGVWYYEVTVVTSGV----MQIGWATRDS----------KFLNHEGY 390  

                   llGddegswgydgsggkkyhagesgepyglpfqekgdviGcflDyeagVt
                   ++Gdde+s++ydg+++  +++ +s ++  + ++e gd++G +lD+ +   
    KIAA1972   391 GIGDDEYSCAYDGCRQLIWYNARSKPHIHPCWKE-GDTVGFLLDLNEK-Q 438  

                   isFtkNGkyLgd.sEshiyaFrnvtfdkkpggpLyPavslgsadgggeai
                   + F++NG +L  ++     +F+  t +     +++ a s+ s     +++
    KIAA1972   439 MIFFLNGNQLPPeK----QVFS-STVS-----GFFAAASFMS----YQQC 474  

                   rlnfgqlp<-*
                   ++nfg +p   
    KIAA1972   475 EFNFGAKP    482  

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