hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17595763/chunk_1/iprscan-20080502-17595763.nocrc
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Query sequence: KIAA1971
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02205.10.fs WH2 motif                                       18.2    0.00039   1
PF02205.10.ls WH2 motif                                       17.8      0.037   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02205.10.ls   1/1     760   777 ..     1    21 []    17.8    0.037
PF02205.10.fs   1/1     765   777 ..     6    21 .]    18.2  0.00039

Alignments of top-scoring domains:
PF02205.10.ls: domain 1 of 1, from 760 to 777: score 17.8, E = 0.037
                   *->aRsaLLaaIrsagqGikLKKv<-*
                           LaaIr   qG+kLKKv   
    KIAA1971   760    INEHILAAIR---QGVKLKKV    777  

PF02205.10.fs: domain 1 of 1, from 765 to 777: score 18.2, E = 0.00039
                   *->LaaIrsagqGikLKKv<-*
                      LaaIr   qG+kLKKv   
    KIAA1971   765    LAAIR---QGVKLKKV    777  

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