# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fh23421.fasta.nr -Q ../query/KIAA1966.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1966, 480 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7813042 sequences Expectation_n fit: rho(ln(x))= 5.6796+/-0.0002; mu= 10.0590+/- 0.011 mean_var=118.7949+/-22.591, 0's: 24 Z-trim: 54 B-trim: 411 in 1/67 Lambda= 0.117673 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|114594504|ref|XP_517262.2| PREDICTED: splicing ( 727) 3371 583.5 6.3e-164 gi|47606762|sp|Q96MU7.3|YTDC1_HUMAN RecName: Full= ( 727) 3371 583.5 6.3e-164 gi|149035126|gb|EDL89830.1| splicing factor YT521- ( 738) 3333 577.0 5.5e-162 gi|149751625|ref|XP_001501576.1| PREDICTED: simila ( 730) 3329 576.3 8.8e-162 gi|124430549|ref|NP_808348.2| YTH domain containin ( 736) 3329 576.3 8.8e-162 gi|149035124|gb|EDL89828.1| splicing factor YT521- ( 628) 3328 576.1 8.9e-162 gi|148706022|gb|EDL37969.1| mCG1787 [Mus musculus] ( 727) 3324 575.5 1.6e-161 gi|28380115|sp|Q9QY02.1|YTDC1_RAT RecName: Full=YT ( 738) 3323 575.3 1.8e-161 gi|88954297|gb|AAI14070.1| YTH domain containing 1 ( 717) 3252 563.3 7.5e-158 gi|54038191|gb|AAH84321.1| LOC495129 protein [Xeno ( 704) 2922 507.2 5.4e-141 gi|63995069|gb|AAY41024.1| unknown [Homo sapiens] ( 658) 2817 489.4 1.2e-135 gi|31808095|gb|AAH53863.1| YTH domain containing 1 ( 709) 2817 489.4 1.3e-135 gi|16551831|dbj|BAB71181.1| unnamed protein produc ( 658) 2808 487.8 3.5e-135 gi|149035125|gb|EDL89829.1| splicing factor YT521- ( 712) 2805 487.4 5.2e-135 gi|2696611|dbj|BAA23885.1| RNA splicing-related pr ( 712) 2795 485.7 1.7e-134 gi|149751627|ref|XP_001501568.1| PREDICTED: simila ( 712) 2775 482.3 1.8e-133 gi|73975101|ref|XP_532391.2| PREDICTED: similar to ( 712) 2775 482.3 1.8e-133 gi|74268102|gb|AAI02815.1| YTHDC1 protein [Bos tau ( 376) 2611 454.1 2.8e-125 gi|51703808|gb|AAH81325.1| MGC89461 protein [Xenop ( 673) 2612 454.6 3.6e-125 gi|18490765|gb|AAH22697.1| Ythdc1 protein [Mus mus ( 350) 2529 440.2 4.1e-121 gi|55250288|gb|AAH85378.1| Zgc:101592 [Danio rerio ( 679) 2270 396.5 1.1e-107 gi|220672867|emb|CAX13792.1| novel protein (zgc:10 ( 679) 2263 395.3 2.5e-107 gi|28981324|gb|AAH48817.1| Ythdc1 protein [Mus mus ( 294) 2151 375.9 7.6e-102 gi|109074647|ref|XP_001098270.1| PREDICTED: simila ( 654) 1645 290.4 9.4e-76 gi|126304508|ref|XP_001362487.1| PREDICTED: simila ( 620) 1545 273.4 1.2e-70 gi|126349835|ref|XP_001369644.1| PREDICTED: simila ( 620) 1536 271.9 3.4e-70 gi|126304512|ref|XP_001362659.1| PREDICTED: simila ( 620) 1536 271.9 3.4e-70 gi|126304510|ref|XP_001362567.1| PREDICTED: simila ( 620) 1536 271.9 3.4e-70 gi|126304514|ref|XP_001362747.1| PREDICTED: simila ( 620) 1532 271.2 5.4e-70 gi|73975103|ref|XP_861427.1| PREDICTED: similar to ( 209) 1443 255.6 9.2e-66 gi|55729205|emb|CAH91339.1| hypothetical protein [ ( 482) 1361 242.0 2.5e-61 gi|73975097|ref|XP_861358.1| PREDICTED: similar to ( 484) 1341 238.6 2.6e-60 gi|159164852|pdb|2YUD|A Chain A, Solution Structur ( 180) 1182 211.2 1.8e-52 gi|126349833|ref|XP_001369617.1| PREDICTED: simila ( 486) 1187 212.5 2e-52 gi|26348613|dbj|BAC37946.1| unnamed protein produc ( 164) 1158 207.1 2.9e-51 gi|60099225|emb|CAH65443.1| hypothetical protein [ ( 473) 1143 205.0 3.4e-50 gi|115901588|ref|XP_783255.2| PREDICTED: hypotheti ( 763) 1104 198.6 4.6e-48 gi|47216984|emb|CAG04926.1| unnamed protein produc ( 592) 927 168.5 4.3e-39 gi|110760146|ref|XP_395221.3| PREDICTED: similar t ( 545) 919 167.1 1e-38 gi|212511561|gb|EEB14501.1| splicing factor yt521- ( 431) 899 163.6 9.4e-38 gi|198435163|ref|XP_002127950.1| PREDICTED: simila ( 624) 900 163.9 1.1e-37 gi|91092310|ref|XP_969804.1| PREDICTED: similar to ( 435) 876 159.7 1.4e-36 gi|156537207|ref|XP_001604858.1| PREDICTED: simila ( 556) 838 153.3 1.5e-34 gi|108882333|gb|EAT46558.1| splicing factor yt521- ( 594) 828 151.7 5e-34 gi|167866328|gb|EDS29711.1| splicing factor yt521- ( 569) 809 148.4 4.5e-33 gi|157015845|gb|EAA11066.4| AGAP005940-PB [Anophel ( 790) 776 143.0 2.7e-31 gi|157015844|gb|EDO63761.1| AGAP005940-PA [Anophel ( 879) 773 142.5 4.2e-31 gi|210083579|gb|EEA32171.1| hypothetical protein B ( 170) 734 135.1 1.4e-29 gi|198151298|gb|EDY74147.1| GA28277 [Drosophila ps ( 735) 725 134.3 1.1e-28 gi|190624420|gb|EDV39944.1| GF10271 [Drosophila an ( 713) 723 133.9 1.3e-28 >>gi|114594504|ref|XP_517262.2| PREDICTED: splicing fact (727 aa) initn: 3371 init1: 3371 opt: 3371 Z-score: 3099.3 bits: 583.5 E(): 6.3e-164 Smith-Waterman score: 3371; 100.000% identity (100.000% similar) in 480 aa overlap (1-480:248-727) 10 20 30 KIAA19 EEYEQDERDQKEEGNDYDTRSEASDSGSES :::::::::::::::::::::::::::::: gi|114 DAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSES 220 230 240 250 260 270 40 50 60 70 80 90 KIAA19 VSFTDGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VSFTDGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSV 280 290 300 310 320 330 100 110 120 130 140 150 KIAA19 RAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSV 340 350 360 370 380 390 160 170 180 190 200 210 KIAA19 ILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTK 400 410 420 430 440 450 220 230 240 250 260 270 KIAA19 SAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQP 460 470 480 490 500 510 280 290 300 310 320 330 KIAA19 RSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDRRFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDRRFS 520 530 540 550 560 570 340 350 360 370 380 390 KIAA19 GVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPPPQAHPPYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPPPQAHPPYS 580 590 600 610 620 630 400 410 420 430 440 450 KIAA19 GHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDR 640 650 660 670 680 690 460 470 480 KIAA19 ERDRGRDRERERERLCDRDRDRGERGRYRR :::::::::::::::::::::::::::::: gi|114 ERDRGRDRERERERLCDRDRDRGERGRYRR 700 710 720 >>gi|47606762|sp|Q96MU7.3|YTDC1_HUMAN RecName: Full=YTH (727 aa) initn: 3371 init1: 3371 opt: 3371 Z-score: 3099.3 bits: 583.5 E(): 6.3e-164 Smith-Waterman score: 3371; 100.000% identity (100.000% similar) in 480 aa overlap (1-480:248-727) 10 20 30 KIAA19 EEYEQDERDQKEEGNDYDTRSEASDSGSES :::::::::::::::::::::::::::::: gi|476 DAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSES 220 230 240 250 260 270 40 50 60 70 80 90 KIAA19 VSFTDGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 VSFTDGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSV 280 290 300 310 320 330 100 110 120 130 140 150 KIAA19 RAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 RAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSV 340 350 360 370 380 390 160 170 180 190 200 210 KIAA19 ILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 ILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTK 400 410 420 430 440 450 220 230 240 250 260 270 KIAA19 SAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 SAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQP 460 470 480 490 500 510 280 290 300 310 320 330 KIAA19 RSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDRRFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 RSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDRRFS 520 530 540 550 560 570 340 350 360 370 380 390 KIAA19 GVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPPPQAHPPYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 GVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPPPQAHPPYS 580 590 600 610 620 630 400 410 420 430 440 450 KIAA19 GHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 GHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDR 640 650 660 670 680 690 460 470 480 KIAA19 ERDRGRDRERERERLCDRDRDRGERGRYRR :::::::::::::::::::::::::::::: gi|476 ERDRGRDRERERERLCDRDRDRGERGRYRR 700 710 720 >>gi|149035126|gb|EDL89830.1| splicing factor YT521-B, i (738 aa) initn: 2517 init1: 2276 opt: 3333 Z-score: 3064.4 bits: 577.0 E(): 5.5e-162 Smith-Waterman score: 3333; 97.746% identity (98.361% similar) in 488 aa overlap (1-480:251-738) 10 20 30 KIAA19 EEYEQDERDQKEEGNDYDTRSEASDSGSES :::::::::::::::::::::::::::::: gi|149 DEEVDEDAEEEEDEEEDEEEEDEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSES 230 240 250 260 270 280 40 50 60 70 80 90 KIAA19 VSFTDGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VSFTDGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSV 290 300 310 320 330 340 100 110 120 130 140 150 KIAA19 RAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSV 350 360 370 380 390 400 160 170 180 190 200 210 KIAA19 ILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTK 410 420 430 440 450 460 220 230 240 250 260 270 KIAA19 SAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQP :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|149 SAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQLIHKMRHKRRMHSQP 470 480 490 500 510 520 280 290 300 310 320 KIAA19 RSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVD---- :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDSFTN 530 540 550 560 570 580 330 340 350 360 370 380 KIAA19 ----RRFSGVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPP ::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|149 LIPNRRFSGVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGIEQPPHHPYYQHHAPP 590 600 610 620 630 640 390 400 410 420 430 440 KIAA19 PQAHPPYSGHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PQAHPPYSGHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDR 650 660 670 680 690 700 450 460 470 480 KIAA19 PRDNRRDRERDRGRDRERERERLCDRDRDRGERGRYRR ::::::::::::::::::::::.::::::::::::::: gi|149 PRDNRRDRERDRGRDRERERERICDRDRDRGERGRYRR 710 720 730 >>gi|149751625|ref|XP_001501576.1| PREDICTED: similar to (730 aa) initn: 3329 init1: 3329 opt: 3329 Z-score: 3060.7 bits: 576.3 E(): 8.8e-162 Smith-Waterman score: 3329; 98.958% identity (99.167% similar) in 480 aa overlap (1-480:251-730) 10 20 30 KIAA19 EEYEQDERDQKEEGNDYDTRSEASDSGSES :::::::::::::::::::::::::: ::: gi|149 DEEVDEDGEEEEEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSDSES 230 240 250 260 270 280 40 50 60 70 80 90 KIAA19 VSFTDGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VSFTDGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSV 290 300 310 320 330 340 100 110 120 130 140 150 KIAA19 RAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSV ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|149 RAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSV 350 360 370 380 390 400 160 170 180 190 200 210 KIAA19 ILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTK :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|149 ILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTK 410 420 430 440 450 460 220 230 240 250 260 270 KIAA19 SAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQP 470 480 490 500 510 520 280 290 300 310 320 330 KIAA19 RSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDRRFS :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|149 RSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYAPEFHQRPGYLKDPRYQEVDRRFS 530 540 550 560 570 580 340 350 360 370 380 390 KIAA19 GVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPPPQAHPPYS ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|149 GVRRDVFLNGSYNDYVREFHNMGPPPPWQGMAPYPGMEQPPHHPYYQHHAPPPQAHPPYS 590 600 610 620 630 640 400 410 420 430 440 450 KIAA19 GHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDR 650 660 670 680 690 700 460 470 480 KIAA19 ERDRGRDRERERERLCDRDRDRGERGRYRR :::::::::::::::::::::::::::::: gi|149 ERDRGRDRERERERLCDRDRDRGERGRYRR 710 720 730 >>gi|124430549|ref|NP_808348.2| YTH domain containing 1 (736 aa) initn: 2513 init1: 2272 opt: 3329 Z-score: 3060.7 bits: 576.3 E(): 8.8e-162 Smith-Waterman score: 3329; 97.541% identity (98.361% similar) in 488 aa overlap (1-480:249-736) 10 20 30 KIAA19 EEYEQDERDQKEEGNDYDTRSEASDSGSES :::::::::::::::::::::::::::::: gi|124 EDDEEVDEDAEEEEEEDEEEEEDEDEDEEEEEYEQDERDQKEEGNDYDTRSEASDSGSES 220 230 240 250 260 270 40 50 60 70 80 90 KIAA19 VSFTDGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 VSFTDGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSV 280 290 300 310 320 330 100 110 120 130 140 150 KIAA19 RAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 RAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSV 340 350 360 370 380 390 160 170 180 190 200 210 KIAA19 ILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 ILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTK 400 410 420 430 440 450 220 230 240 250 260 270 KIAA19 SAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQP :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|124 SAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQLIHKMRHKRRMHSQP 460 470 480 490 500 510 280 290 300 310 320 KIAA19 RSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVD---- ::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|124 RSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYVKDPRYQEVDSFTN 520 530 540 550 560 570 330 340 350 360 370 380 KIAA19 ----RRFSGVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPP ::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|124 LIPNRRFSGVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGIEQPPHHPYYQHHAPP 580 590 600 610 620 630 390 400 410 420 430 440 KIAA19 PQAHPPYSGHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 PQAHPPYSGHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDR 640 650 660 670 680 690 450 460 470 480 KIAA19 PRDNRRDRERDRGRDRERERERLCDRDRDRGERGRYRR ::::::::::::::::::::::.::::::::::::::: gi|124 PRDNRRDRERDRGRDRERERERICDRDRDRGERGRYRR 700 710 720 730 >>gi|149035124|gb|EDL89828.1| splicing factor YT521-B, i (628 aa) initn: 3328 init1: 3328 opt: 3328 Z-score: 3060.6 bits: 576.1 E(): 8.9e-162 Smith-Waterman score: 3328; 99.160% identity (100.000% similar) in 476 aa overlap (5-480:153-628) 10 20 30 KIAA19 EEYEQDERDQKEEGNDYDTRSEASDSGSESVSFT .::::::::::::::::::::::::::::: gi|149 REPYKSQPEKPCLRKRDSERRAKSPTPDGSEDERDQKEEGNDYDTRSEASDSGSESVSFT 130 140 150 160 170 180 40 50 60 70 80 90 KIAA19 DGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVR 190 200 210 220 230 240 100 110 120 130 140 150 KIAA19 KDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIF 250 260 270 280 290 300 160 170 180 190 200 210 KIAA19 SVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHL 310 320 330 340 350 360 220 230 240 250 260 270 KIAA19 TNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQPRSRG :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|149 TNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQLIHKMRHKRRMHSQPRSRG 370 380 390 400 410 420 280 290 300 310 320 330 KIAA19 RPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDRRFSGVRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDRRFSGVRR 430 440 450 460 470 480 340 350 360 370 380 390 KIAA19 DVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPPPQAHPPYSGHHP ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|149 DVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGIEQPPHHPYYQHHAPPPQAHPPYSGHHP 490 500 510 520 530 540 400 410 420 430 440 450 KIAA19 VPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDRERDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDRERDR 550 560 570 580 590 600 460 470 480 KIAA19 GRDRERERERLCDRDRDRGERGRYRR ::::::::::.::::::::::::::: gi|149 GRDRERERERICDRDRDRGERGRYRR 610 620 >>gi|148706022|gb|EDL37969.1| mCG1787 [Mus musculus] (727 aa) initn: 3324 init1: 3324 opt: 3324 Z-score: 3056.2 bits: 575.5 E(): 1.6e-161 Smith-Waterman score: 3324; 98.950% identity (100.000% similar) in 476 aa overlap (5-480:252-727) 10 20 30 KIAA19 EEYEQDERDQKEEGNDYDTRSEASDSGSESVSFT .::::::::::::::::::::::::::::: gi|148 REPYKSQPEKTCLRKRDSERRAKSPTPDGSEDERDQKEEGNDYDTRSEASDSGSESVSFT 230 240 250 260 270 280 40 50 60 70 80 90 KIAA19 DGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVR 290 300 310 320 330 340 100 110 120 130 140 150 KIAA19 KDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIF 350 360 370 380 390 400 160 170 180 190 200 210 KIAA19 SVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHL 410 420 430 440 450 460 220 230 240 250 260 270 KIAA19 TNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQPRSRG :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|148 TNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQLIHKMRHKRRMHSQPRSRG 470 480 490 500 510 520 280 290 300 310 320 330 KIAA19 RPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDRRFSGVRR ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|148 RPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYVKDPRYQEVDRRFSGVRR 530 540 550 560 570 580 340 350 360 370 380 390 KIAA19 DVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPPPQAHPPYSGHHP ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|148 DVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGIEQPPHHPYYQHHAPPPQAHPPYSGHHP 590 600 610 620 630 640 400 410 420 430 440 450 KIAA19 VPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDRERDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDRERDR 650 660 670 680 690 700 460 470 480 KIAA19 GRDRERERERLCDRDRDRGERGRYRR ::::::::::.::::::::::::::: gi|148 GRDRERERERICDRDRDRGERGRYRR 710 720 >>gi|28380115|sp|Q9QY02.1|YTDC1_RAT RecName: Full=YTH do (738 aa) initn: 2507 init1: 2266 opt: 3323 Z-score: 3055.2 bits: 575.3 E(): 1.8e-161 Smith-Waterman score: 3323; 97.541% identity (98.156% similar) in 488 aa overlap (1-480:251-738) 10 20 30 KIAA19 EEYEQDERDQKEEGNDYDTRSEASDSGSES :::::::::::::::::::::::::::::: gi|283 DEEVDEDAEEEEDEEEDEEEEDEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSES 230 240 250 260 270 280 40 50 60 70 80 90 KIAA19 VSFTDGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|283 VSFTDGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSV 290 300 310 320 330 340 100 110 120 130 140 150 KIAA19 RAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSV :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: gi|283 RAVRKDQTSKLKSVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSV 350 360 370 380 390 400 160 170 180 190 200 210 KIAA19 ILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|283 ILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTK 410 420 430 440 450 460 220 230 240 250 260 270 KIAA19 SAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQP :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|283 SAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQLIHKMRHKRRMHSQP 470 480 490 500 510 520 280 290 300 310 320 KIAA19 RSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVD---- :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|283 RSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDSFTN 530 540 550 560 570 580 330 340 350 360 370 380 KIAA19 ----RRFSGVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPP ::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|283 LIPNRRFSGVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGIEQPPHHPYYQHHAPP 590 600 610 620 630 640 390 400 410 420 430 440 KIAA19 PQAHPPYSGHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|283 PQAHPPYSGHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDR 650 660 670 680 690 700 450 460 470 480 KIAA19 PRDNRRDRERDRGRDRERERERLCDRDRDRGERGRYRR ::::::::::::::::::::::.::::::::::::::: gi|283 PRDNRRDRERDRGRDRERERERICDRDRDRGERGRYRR 710 720 730 >>gi|88954297|gb|AAI14070.1| YTH domain containing 1 [Bo (717 aa) initn: 3252 init1: 3252 opt: 3252 Z-score: 2990.2 bits: 563.3 E(): 7.5e-158 Smith-Waterman score: 3252; 98.721% identity (99.360% similar) in 469 aa overlap (1-469:249-717) 10 20 30 KIAA19 EEYEQDERDQKEEGNDYDTRSEASDSGSES :::::::::::::::::::::::::: ::: gi|889 EEDEEVDEDGEEEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSDSES 220 230 240 250 260 270 40 50 60 70 80 90 KIAA19 VSFTDGSVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSV :.:::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|889 VTFTDGSVRSGSGTDGSDEKKKERKRARGISPIIFDRSGSSASESYAGSEKKHEKLSSSV 280 290 300 310 320 330 100 110 120 130 140 150 KIAA19 RAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSV :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|889 RAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNVAFRSARSV 340 350 360 370 380 390 160 170 180 190 200 210 KIAA19 ILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|889 ILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTK 400 410 420 430 440 450 220 230 240 250 260 270 KIAA19 SAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|889 SAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQP 460 470 480 490 500 510 280 290 300 310 320 330 KIAA19 RSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDRRFS :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|889 RSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYAPEFHQRPGYLKDPRYQEVDRRFS 520 530 540 550 560 570 340 350 360 370 380 390 KIAA19 GVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPPPQAHPPYS ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|889 GVRRDVFLNGSYNDYVREFHNMGPPPPWQGMTPYPGMEQPPHHPYYQHHAPPPQAHPPYS 580 590 600 610 620 630 400 410 420 430 440 450 KIAA19 GHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|889 GHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDR 640 650 660 670 680 690 460 470 480 KIAA19 ERDRGRDRERERERLCDRDRDRGERGRYRR ::::::::::::::::::: gi|889 ERDRGRDRERERERLCDRD 700 710 >>gi|54038191|gb|AAH84321.1| LOC495129 protein [Xenopus (704 aa) initn: 2096 init1: 1592 opt: 2922 Z-score: 2687.5 bits: 507.2 E(): 5.4e-141 Smith-Waterman score: 2922; 86.777% identity (94.628% similar) in 484 aa overlap (1-480:225-704) 10 20 KIAA19 EEYEQDE--RDQKEEGNDYDTRSEASDSGS :::..:: :::.. ::::::::::::: : gi|540 EEQGNNSENDEEGMEEEEEDDEGEEAEEGEEEYDRDEHARDQRD-GNDYDTRSEASDSES 200 210 220 230 240 250 30 40 50 60 70 80 KIAA19 ESVSFTDG-SVRSGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLS .:.::::: :::::::.: ::.::::::::::::::::::::::::.:::::::::::: gi|540 DSASFTDGDSVRSGSGSDISDQKKKERKRARGISPIVFDRSGSSASDSYAGSEKKHEKLP 260 270 280 290 300 310 90 100 110 120 130 140 KIAA19 SSVRAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSA :::: :::..:.:..:.::.:::::::::::::::::::::::::::::::::: ::::: gi|540 SSVRDVRKERTNKIRYILQEARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSA 320 330 340 350 360 370 150 160 170 180 190 200 KIAA19 RSVILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELP :::::.::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|540 RSVILVFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELS 380 390 400 410 420 430 210 220 230 240 250 260 KIAA19 FTKSAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMH ::: .:::::::::::::::::::::: .::::::::: :.:::::::::::::::::. gi|540 FTKCVHLTNPWNEHKPVKIGRDGQEIEPDCGTQLCLLFSADDSIDLYQVIHKMRHKRRMN 440 450 460 470 480 490 270 280 290 300 310 320 KIAA19 SQPRSRGRPSRREPVRDVGRRRPEDYDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDR ::::::::::::: .:.::::.::.::::: :::::::::::::::::..:::::::::: gi|540 SQPRSRGRPSRREATREVGRRQPEEYDIHN-RKKPRIDYPPEFHQRPGFVKDPRYQEVDR 500 510 520 530 540 550 330 340 350 360 370 380 KIAA19 RFSGVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPPPQAHP ::.::::::::::::::::::::::::::::::: :::..:: ::::::::::::::::: gi|540 RFTGVRRDVFLNGSYNDYVREFHNMGPPPPWQGMQPYPAIEQAPHHPYYQHHAPPPQAHP 560 570 580 590 600 610 390 400 410 420 430 440 KIAA19 PYSGHHPVPHEARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNR .:::::: :.::::::::::::::::::::::::::::::::::::.:::::.:::::: gi|540 QFSGHHPVQHDARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERERERERERPRDNR 620 630 640 650 660 670 450 460 470 480 KIAA19 RDRERDRGRDRERERERLCDRDR-DRGERGRYRR ::: ::: :::.:.: : :::: :::.:::::: gi|540 RDRGRDRDRDRDRDRMR--DRDRGDRGDRGRYRR 680 690 700 480 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Fri Mar 6 06:26:37 2009 done: Fri Mar 6 06:31:13 2009 Total Scan time: 1565.550 Total Display time: 0.210 Function used was FASTA [version 34.26.5 April 26, 2007]