hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17261669/chunk_1/iprscan-20080502-17261669.nocrc
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Query sequence: KIAA1951
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 279.3    2.9e-79  14

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/14     66    88 ..     1    23 []    17.7      1.6
SM00355      2/14    117   139 ..     1    23 []    12.9       11
SM00355      3/14    149   172 ..     1    23 []    18.3      1.1
SM00355      4/14    206   228 ..     1    23 []    22.6    0.054
SM00355      5/14    282   305 ..     1    23 []     4.0  1.1e+02
SM00355      6/14    314   336 ..     1    23 []    20.6     0.22
SM00355      7/14    341   363 ..     1    23 []    26.2   0.0046
SM00355      8/14    369   391 ..     1    23 []    19.3     0.55
SM00355      9/14    397   418 ..     1    23 []     7.8       41
SM00355     10/14    451   474 ..     1    23 []    28.3   0.0011
SM00355     11/14    481   503 ..     1    23 []    23.7    0.026
SM00355     12/14    509   531 ..     1    23 []    27.1   0.0024
SM00355     13/14    537   559 ..     1    23 []    28.9  0.00072
SM00355     14/14    582   604 ..     1    23 []    21.8    0.096

Alignments of top-scoring domains:
SM00355: domain 1 of 14, from 66 to 88: score 17.7, E = 1.6
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + C++ Cg  +++ ++   H+ +H   
    KIAA1951    66    FMCSE-CGSLYNTLeEVLSHQEQH    88   

SM00355: domain 2 of 14, from 117 to 139: score 12.9, E = 11
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C + C++   s+++L  H+  H   
    KIAA1951   117    FQCGE-CSQLILSPgELLAHQDAH    139  

SM00355: domain 3 of 14, from 149 to 172: score 18.3, E = 1.1
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      y+C   C++ f+s++  + H + +H   
    KIAA1951   149    YQCWD-CQELFPSPeLWVAHRKaQH    172  

SM00355: domain 4 of 14, from 206 to 228: score 22.6, E = 0.054
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+Cp+ C+  + +++++ +H+ +H   
    KIAA1951   206    YECPE-CSTLCATPeEFLEHQGTH    228  

SM00355: domain 5 of 14, from 282 to 305: score 4.0, E = 1.1e+02
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                        C   C+++ +s++a ++H r+ H   
    KIAA1951   282    QGCGD-CPQHQPSAgARRQHRRtAH    305  

SM00355: domain 6 of 14, from 314 to 336: score 20.6, E = 0.22
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ C++sfss++ L+ H r H   
    KIAA1951   314    FHCSQ-CQRSFSSAnRLQAHGRAH    336  

SM00355: domain 7 of 14, from 341 to 363: score 26.2, E = 0.0046
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C+  C+k+f+ + +L++H+r H   
    KIAA1951   341    HECTT-CSKVFKKAaSLEQHLRLH    363  

SM00355: domain 8 of 14, from 369 to 391: score 19.3, E = 0.55
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C   Cg+ f ++  L+ H r H   
    KIAA1951   369    YLCVD-CGRGFGTElTLVAHRRAH    391  

SM00355: domain 9 of 14, from 397 to 418: score 7.8, E = 41
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C   Cgk+fs+ + +  H r+H   
    KIAA1951   397    HRCR--CGKTFSNMtKFLYHRRTH    418  

SM00355: domain 10 of 14, from 451 to 474: score 28.3, E = 0.0011
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      + Cp+ C+ksf s++ L rH r vH   
    KIAA1951   451    LPCPQ-CSKSFASAsRLSRHRRaVH    474  

SM00355: domain 11 of 14, from 481 to 503: score 23.7, E = 0.026
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C + Cgk f+   + ++H+r+H   
    KIAA1951   481    HRCGV-CGKGFKKLiHVRNHLRTH    503  

SM00355: domain 12 of 14, from 509 to 531: score 27.1, E = 0.0024
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C+  Cgk+f s  +L rH+ +H   
    KIAA1951   509    FQCHS-CGKTFASLaNLSRHQLTH    531  

SM00355: domain 13 of 14, from 537 to 559: score 28.9, E = 0.00072
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C   Cgk+f++ ++L++H r H   
    KIAA1951   537    YQCLD-CGKRFTQSsNLQQHRRLH    559  

SM00355: domain 14 of 14, from 582 to 604: score 21.8, E = 0.096
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C   Cg+ f+    L+ H+rvH   
    KIAA1951   582    YYCGT-CGRWFRAMaGLRLHQRVH    604  

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