hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17162152/chunk_1/iprscan-20080502-17162152.nocrc
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Query sequence: KIAA1945
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF02784.7.fs    Pyridoxal-dependent decarboxylase, py   334.0    7.5e-99   1
PF02784.7.ls    Pyridoxal-dependent decarboxylase, py   335.9    6.5e-98   1
PF00278.12.fs   Pyridoxal-dependent decarboxylase, C-   105.2    2.5e-29   1
PF00278.12.ls   Pyridoxal-dependent decarboxylase, C-   107.0    5.2e-29   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF02784.7.fs      1/1      50   288 ..     1   288 []   334.0  7.5e-99
PF02784.7.ls      1/1      50   288 ..     1   288 []   335.9  6.5e-98
PF00278.12.fs     1/1     291   414 ..     1   156 []   105.2  2.5e-29
PF00278.12.ls     1/1     291   414 ..     1   156 []   107.0  5.2e-29

Alignments of top-scoring domains:
PF02784.7.fs: domain 1 of 1, from 50 to 288: score 334.0, E = 7.5e-99
                   *->DlgrHiverahalwqaflprglkGvvqpfYAVKansdpavlrlLael
                      Dlg   ++r+h  + ++lpr     v+pfYAVK+ns+p+vl++La+l
    KIAA1945    50    DLG--AIVRKHFCFLKCLPR-----VRPFYAVKCNSSPGVLKVLAQL 89   

                   GPlHYGfDcaSkgELerVLaaynagvsPerIifanpcKsrselryAlehr
                   G l  Gf ca k+E e+V+    +g+++++Ii anpcK+ ++++yA+ h 
    KIAA1945    90 G-L--GFSCANKAEMELVQH---IGIPASKIICANPCKQIAQIKYAAKH- 132  

                   kMGgvvcvtvDnveELekiaklapeaGvkprllLRvkpdvdahahcylst
                      g+++  +Dn+ EL+k+ k +p a    +++L +++d d+h+ + ls 
    KIAA1945   133 ---GIQLLSFDNEMELAKVVKSHPSA----KMVLCIATD-DSHSLSCLSL 174  

                   GqedsKFGadledieeaealLkaAkelgnlnvvGvhfHVGSgitdleafv
                        KFG++l++   ++ lL+ Ak+++ ++vvGv+fH+GSg++d++a++
    KIAA1945   175 -----KFGVSLKS---CRHLLENAKKHH-VEVVGVSFHIGSGCPDPQAYA 215  

                   kAvedarevfdqgadelGfktidlkiLDlGGGfgvdYtgtrsqSDmSVae
                   + ++dar vf++g  elG+k   +++LDlGGGf++++ +         ++
    KIAA1945   216 QSIADARLVFEMGT-ELGHK---MHVLDLGGGFPGTEGA---------KV 252  

                   dfeeiAevinaaleelfphageygdpgptiiaEPGRyivAa<-*
                    feeiA+vin al+ +fp+     ++g++i aE GRy+v +   
    KIAA1945   253 RFEEIASVINSALDLYFPE-----GCGVDIFAELGRYYVTS    288  

PF02784.7.ls: domain 1 of 1, from 50 to 288: score 335.9, E = 6.5e-98
                   *->DlgrHiverahalwqaflprglkGvvqpfYAVKansdpavlrlLael
                      Dlg   ++r+h  + ++lpr     v+pfYAVK+ns+p+vl++La+l
    KIAA1945    50    DLG--AIVRKHFCFLKCLPR-----VRPFYAVKCNSSPGVLKVLAQL 89   

                   GPlHYGfDcaSkgELerVLaaynagvsPerIifanpcKsrselryAlehr
                   G l  Gf ca k+E e+V+    +g+++++Ii anpcK+ ++++yA+ h 
    KIAA1945    90 G-L--GFSCANKAEMELVQH---IGIPASKIICANPCKQIAQIKYAAKH- 132  

                   kMGgvvcvtvDnveELekiaklapeaGvkprllLRvkpdvdahahcylst
                      g+++  +Dn+ EL+k+ k +p a    +++L +++d d+h+ + ls 
    KIAA1945   133 ---GIQLLSFDNEMELAKVVKSHPSA----KMVLCIATD-DSHSLSCLSL 174  

                   GqedsKFGadledieeaealLkaAkelgnlnvvGvhfHVGSgitdleafv
                        KFG++l++   ++ lL+ Ak+++ ++vvGv+fH+GSg++d++a++
    KIAA1945   175 -----KFGVSLKS---CRHLLENAKKHH-VEVVGVSFHIGSGCPDPQAYA 215  

                   kAvedarevfdqgadelGfktidlkiLDlGGGfgvdYtgtrsqSDmSVae
                   + ++dar vf++g  elG+k   +++LDlGGGf++++ +         ++
    KIAA1945   216 QSIADARLVFEMGT-ELGHK---MHVLDLGGGFPGTEGA---------KV 252  

                   dfeeiAevinaaleelfphageygdpgptiiaEPGRyivAa<-*
                    feeiA+vin al+ +fp+     ++g++i aE GRy+v +   
    KIAA1945   253 RFEEIASVINSALDLYFPE-----GCGVDIFAELGRYYVTS    288  

PF00278.12.fs: domain 1 of 1, from 291 to 414: score 105.2, E = 2.5e-29
                   *->tLvtnVigvkerpgktpEcyndAqkecllFlGlLeRAaELywIarei
                      t ++++i++ke+                                  +
    KIAA1945   291    TVAVSIIAKKEV--------------------------------LLD 305  

                   gnea.k.......afvyflddGvygslpdpalydalhpilpvsr..ldee
                   +++++ +++++++++vy+ld Gvyg  ++++l+d + p +++++++  e+
    KIAA1945   306 QPGReEengstskTIVYHLDEGVYGI-FNSVLFDNICPTPILQKkpSTEQ 354  

                   ptepvtlaGptCdsgDvlarFIdgqvdvsLPlHvelevGDllvffdaGAY
                   p+++++l+Gp  d+ D++a+        +LP    l+vGD+lvf ++GAY
    KIAA1945   355 PLYSSSLWGPAVDGCDCVAE------GLWLP---QLHVGDWLVFDNMGAY 395  

                   teslasnFNgfprpaeVlv<-*
                   t  ++s F g + + + +    
    KIAA1945   396 TVGMGSPFWGTQACHITYA    414  

PF00278.12.ls: domain 1 of 1, from 291 to 414: score 107.0, E = 5.2e-29
                   *->tLvtnVigvkerpgktpEcyndAqkecllFlGlLeRAaELywIarei
                      t ++++i++ke+                                  +
    KIAA1945   291    TVAVSIIAKKEV--------------------------------LLD 305  

                   gnea.k.......afvyflddGvygslpdpalydalhpilpvsr..ldee
                   +++++ +++++++++vy+ld Gvyg  ++++l+d + p +++++++  e+
    KIAA1945   306 QPGReEengstskTIVYHLDEGVYGI-FNSVLFDNICPTPILQKkpSTEQ 354  

                   ptepvtlaGptCdsgDvlarFIdgqvdvsLPlHvelevGDllvffdaGAY
                   p+++++l+Gp  d+ D++a+        +LP    l+vGD+lvf ++GAY
    KIAA1945   355 PLYSSSLWGPAVDGCDCVAE------GLWLP---QLHVGDWLVFDNMGAY 395  

                   teslasnFNgfprpaeVlv<-*
                   t  ++s F g + + + +    
    KIAA1945   396 TVGMGSPFWGTQACHITYA    414  

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