# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fk03135mrp1.fasta.nr -Q ../query/KIAA1935.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1935, 441 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7804929 sequences Expectation_n fit: rho(ln(x))= 6.9641+/-0.000212; mu= 3.8545+/- 0.012 mean_var=170.5309+/-32.839, 0's: 36 Z-trim: 84 B-trim: 372 in 1/66 Lambda= 0.098214 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|34192479|gb|AAH35076.2| PWWP2A protein [Homo sa ( 571) 2940 428.5 2e-117 gi|119581971|gb|EAW61567.1| hCG1647660, isoform CR ( 520) 2910 424.2 3.5e-116 gi|87250879|gb|AAI05111.1| PWWP2A protein [Homo sa ( 560) 2910 424.3 3.7e-116 gi|160419226|sp|Q96N64.2|PWP2A_HUMAN RecName: Full ( 755) 2910 424.4 4.5e-116 gi|126291384|ref|XP_001379889.1| PREDICTED: simila ( 826) 2361 346.7 1.3e-92 gi|123227605|emb|CAM20714.1| PWWP domain containin ( 533) 1886 279.2 1.7e-72 gi|160419227|sp|Q69Z61.2|PWP2A_MOUSE RecName: Full ( 730) 1886 279.3 2.1e-72 gi|187469485|gb|AAI66858.1| Pwwp2a protein [Rattus ( 533) 1859 275.3 2.4e-71 gi|148701907|gb|EDL33854.1| mCG51512, isoform CRA_ ( 378) 1756 260.6 4.7e-67 gi|194219644|ref|XP_001917472.1| PREDICTED: simila ( 648) 1549 231.5 4.6e-58 gi|109490537|ref|XP_001068107.1| PREDICTED: simila ( 761) 1526 228.3 4.9e-57 gi|149412531|ref|XP_001506246.1| PREDICTED: simila ( 617) 1509 225.8 2.2e-56 gi|114603184|ref|XP_001141486.1| PREDICTED: simila ( 343) 1437 215.3 1.8e-53 gi|148701906|gb|EDL33853.1| mCG51512, isoform CRA_ ( 329) 1425 213.6 5.6e-53 gi|74140388|dbj|BAE42348.1| unnamed protein produc ( 361) 1418 212.7 1.2e-52 gi|73953565|ref|XP_867159.1| PREDICTED: similar to ( 303) 1370 205.8 1.2e-50 gi|73953567|ref|XP_536448.2| PREDICTED: similar to ( 343) 1370 205.9 1.3e-50 gi|73953563|ref|XP_853285.1| PREDICTED: similar to ( 538) 1370 206.1 1.7e-50 gi|170285073|gb|AAI61427.1| LOC100145656 protein [ ( 670) 1363 205.2 4e-50 gi|149052323|gb|EDM04140.1| rCG34721 [Rattus norve ( 296) 1250 188.8 1.5e-45 gi|189517688|ref|XP_687488.3| PREDICTED: similar t ( 955) 1134 172.9 3e-40 gi|16550769|dbj|BAB71045.1| unnamed protein produc ( 455) 838 130.6 7.6e-28 gi|123227606|emb|CAM20715.1| PWWP domain containin ( 455) 781 122.5 2.1e-25 gi|12852452|dbj|BAB29417.1| unnamed protein produc ( 396) 529 86.8 1e-14 gi|47221413|emb|CAF97331.1| unnamed protein produc ( 898) 531 87.4 1.5e-14 gi|189527373|ref|XP_001920864.1| PREDICTED: simila ( 667) 458 76.9 1.6e-11 gi|166796254|gb|AAI59252.1| LOC561643 protein [Dan ( 231) 419 70.9 3.6e-10 gi|164448584|ref|NP_001069324.2| PWWP domain conta ( 561) 424 72.0 4e-10 gi|114633430|ref|XP_001144978.1| PREDICTED: PWWP d ( 589) 410 70.1 1.6e-09 gi|148839311|ref|NP_001092107.1| PWWP domain conta ( 499) 405 69.3 2.4e-09 gi|160140805|sp|Q6NUJ5.3|PWP2B_HUMAN RecName: Full ( 590) 405 69.4 2.7e-09 gi|118093204|ref|XP_421830.2| PREDICTED: similar t ( 579) 400 68.6 4.3e-09 gi|109659369|gb|AAI18136.1| PWWP domain containing ( 484) 337 59.6 1.9e-06 gi|194041686|ref|XP_001924698.1| PREDICTED: simila ( 526) 326 58.1 5.8e-06 gi|194205522|ref|XP_001488128.2| PREDICTED: simila ( 536) 323 57.7 7.9e-06 gi|47221696|emb|CAG10168.1| unnamed protein produc ( 669) 319 57.2 1.4e-05 gi|119569505|gb|EAW49120.1| PWWP domain containing ( 588) 316 56.8 1.7e-05 gi|114633432|ref|XP_508120.2| PREDICTED: PWWP doma ( 512) 315 56.5 1.7e-05 gi|149061425|gb|EDM11848.1| PWWP domain containing ( 510) 311 56.0 2.5e-05 gi|109091016|ref|XP_001092260.1| PREDICTED: simila ( 513) 310 55.8 2.7e-05 gi|46250267|gb|AAH68574.1| PWWP domain containing ( 513) 308 55.6 3.3e-05 gi|74196636|dbj|BAE34422.1| unnamed protein produc ( 509) 299 54.3 8e-05 gi|109733388|gb|AAI16670.1| PWWP domain containing ( 509) 299 54.3 8e-05 gi|148839364|ref|NP_001092106.1| PWWP domain conta ( 600) 299 54.4 9e-05 gi|189514857|ref|XP_001341222.2| PREDICTED: simila (1565) 305 55.6 9.6e-05 gi|169146082|emb|CAQ14218.1| novel protein similar (1486) 303 55.3 0.00011 gi|156114471|gb|EDO15986.1| hypothetical protein K ( 802) 276 51.2 0.0011 gi|54014834|dbj|BAD56204.1| hypothetical protein [ ( 444) 267 49.7 0.0017 gi|86570475|gb|ABD05032.1| OmpA/MotB [Rhodopseudom ( 651) 266 49.7 0.0024 gi|118088160|ref|XP_001235548.1| PREDICTED: simila (1847) 272 51.0 0.0028 >>gi|34192479|gb|AAH35076.2| PWWP2A protein [Homo sapien (571 aa) initn: 2940 init1: 2940 opt: 2940 Z-score: 2264.6 bits: 428.5 E(): 2e-117 Smith-Waterman score: 2940; 99.773% identity (99.773% similar) in 441 aa overlap (1-441:6-446) 10 20 30 40 50 KIAA19 GEARKKMAAVAAEAAATAASPGEGGAGEAEPEMEPIPGSEAGTDPLPVTATEASV ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 SELEEGEARKKMAAVAAEAAATAASPGEGGAGEAEPEMEPIPGSEAGTDPLPVTATEASV 10 20 30 40 50 60 60 70 80 90 100 110 KIAA19 PDGETDGQQSAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 PDGETDGQQSAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQG 70 80 90 100 110 120 120 130 140 150 160 170 KIAA19 GPELPPSPASPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLDHI :::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|341 GPELPPSPASPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVLQLIPGSEVRVTLDHI 130 140 150 160 170 180 180 190 200 210 220 230 KIAA19 IEDALVVSFRFGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTFQEGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 IEDALVVSFRFGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTFQEGT 190 200 210 220 230 240 240 250 260 270 280 290 KIAA19 EVKCEANGAVPDDPSPVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 EVKCEANGAVPDDPSPVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQP 250 260 270 280 290 300 300 310 320 330 340 350 KIAA19 PPRKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 PPRKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYE 310 320 330 340 350 360 360 370 380 390 400 410 KIAA19 DKKRRNESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANTSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 DKKRRNESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANTSK 370 380 390 400 410 420 420 430 440 KIAA19 AQLSTKKVLQSKNMDHAKAREVLKIA :::::::::::::::::::::::::: gi|341 AQLSTKKVLQSKNMDHAKAREVLKIAKEKAQKKQNETSTSKNAHSKVHFTRRYQNPSSGS 430 440 450 460 470 480 >>gi|119581971|gb|EAW61567.1| hCG1647660, isoform CRA_a (520 aa) initn: 2910 init1: 2910 opt: 2910 Z-score: 2242.1 bits: 424.2 E(): 3.5e-116 Smith-Waterman score: 2910; 100.000% identity (100.000% similar) in 435 aa overlap (7-441:1-435) 10 20 30 40 50 60 KIAA19 GEARKKMAAVAAEAAATAASPGEGGAGEAEPEMEPIPGSEAGTDPLPVTATEASVPDGET :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MAAVAAEAAATAASPGEGGAGEAEPEMEPIPGSEAGTDPLPVTATEASVPDGET 10 20 30 40 50 70 80 90 100 110 120 KIAA19 DGQQSAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPELP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DGQQSAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPELP 60 70 80 90 100 110 130 140 150 160 170 180 KIAA19 PSPASPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLDHIIEDAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PSPASPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLDHIIEDAL 120 130 140 150 160 170 190 200 210 220 230 240 KIAA19 VVSFRFGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTFQEGTEVKCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VVSFRFGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTFQEGTEVKCE 180 190 200 210 220 230 250 260 270 280 290 300 KIAA19 ANGAVPDDPSPVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ANGAVPDDPSPVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA19 KRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYEDKKRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYEDKKRR 300 310 320 330 340 350 370 380 390 400 410 420 KIAA19 NESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANTSKAQLST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANTSKAQLST 360 370 380 390 400 410 430 440 KIAA19 KKVLQSKNMDHAKAREVLKIA ::::::::::::::::::::: gi|119 KKVLQSKNMDHAKAREVLKIAKEKAQKKQNETSTSKNAHSKVHFTRRYQNPSSGSLPPRV 420 430 440 450 460 470 >>gi|87250879|gb|AAI05111.1| PWWP2A protein [Homo sapien (560 aa) initn: 2910 init1: 2910 opt: 2910 Z-score: 2241.7 bits: 424.3 E(): 3.7e-116 Smith-Waterman score: 2910; 100.000% identity (100.000% similar) in 435 aa overlap (7-441:1-435) 10 20 30 40 50 60 KIAA19 GEARKKMAAVAAEAAATAASPGEGGAGEAEPEMEPIPGSEAGTDPLPVTATEASVPDGET :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|872 MAAVAAEAAATAASPGEGGAGEAEPEMEPIPGSEAGTDPLPVTATEASVPDGET 10 20 30 40 50 70 80 90 100 110 120 KIAA19 DGQQSAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPELP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|872 DGQQSAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPELP 60 70 80 90 100 110 130 140 150 160 170 180 KIAA19 PSPASPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLDHIIEDAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|872 PSPASPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLDHIIEDAL 120 130 140 150 160 170 190 200 210 220 230 240 KIAA19 VVSFRFGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTFQEGTEVKCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|872 VVSFRFGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTFQEGTEVKCE 180 190 200 210 220 230 250 260 270 280 290 300 KIAA19 ANGAVPDDPSPVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|872 ANGAVPDDPSPVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA19 KRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYEDKKRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|872 KRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYEDKKRR 300 310 320 330 340 350 370 380 390 400 410 420 KIAA19 NESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANTSKAQLST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|872 NESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANTSKAQLST 360 370 380 390 400 410 430 440 KIAA19 KKVLQSKNMDHAKAREVLKIA ::::::::::::::::::::: gi|872 KKVLQSKNMDHAKAREVLKIAKEKAQKKQNETSTSKNAHSKVHFTRRYQNPSSGSLPPRV 420 430 440 450 460 470 >>gi|160419226|sp|Q96N64.2|PWP2A_HUMAN RecName: Full=PWW (755 aa) initn: 2910 init1: 2910 opt: 2910 Z-score: 2240.1 bits: 424.4 E(): 4.5e-116 Smith-Waterman score: 2910; 100.000% identity (100.000% similar) in 435 aa overlap (7-441:1-435) 10 20 30 40 50 60 KIAA19 GEARKKMAAVAAEAAATAASPGEGGAGEAEPEMEPIPGSEAGTDPLPVTATEASVPDGET :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 MAAVAAEAAATAASPGEGGAGEAEPEMEPIPGSEAGTDPLPVTATEASVPDGET 10 20 30 40 50 70 80 90 100 110 120 KIAA19 DGQQSAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPELP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 DGQQSAPQADEPPLPPPPPPPGELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPELP 60 70 80 90 100 110 130 140 150 160 170 180 KIAA19 PSPASPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLDHIIEDAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 PSPASPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLDHIIEDAL 120 130 140 150 160 170 190 200 210 220 230 240 KIAA19 VVSFRFGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTFQEGTEVKCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 VVSFRFGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTFQEGTEVKCE 180 190 200 210 220 230 250 260 270 280 290 300 KIAA19 ANGAVPDDPSPVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 ANGAVPDDPSPVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA19 KRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYEDKKRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 KRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYEDKKRR 300 310 320 330 340 350 370 380 390 400 410 420 KIAA19 NESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANTSKAQLST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 NESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANTSKAQLST 360 370 380 390 400 410 430 440 KIAA19 KKVLQSKNMDHAKAREVLKIA ::::::::::::::::::::: gi|160 KKVLQSKNMDHAKAREVLKIAKEKAQKKQNETSTSKNAHSKVHFTRRYQNPSSGSLPPRV 420 430 440 450 460 470 >>gi|126291384|ref|XP_001379889.1| PREDICTED: similar to (826 aa) initn: 2244 init1: 1434 opt: 2361 Z-score: 1819.2 bits: 346.7 E(): 1.3e-92 Smith-Waterman score: 2361; 82.637% identity (88.352% similar) in 455 aa overlap (1-441:60-506) 10 20 30 KIAA19 GEARKKMAAVAAEAAATAASPGEGGAGEAE :::::::::::::::::::::::::::::: gi|126 LRGPREGKALEPSAAAAAAAAVAAARVGGGGEARKKMAAVAAEAAATAASPGEGGAGEAE 30 40 50 60 70 80 40 50 60 70 80 KIAA19 PEMEPIPGSEAG----TDPLPVTATEASVPDGETDGQQSAPQADEPPLPPPPPPPGELAR :::::::::::: :::: :::::: : : :.:.. ::::::::: :: :: :: gi|126 PEMEPIPGSEAGAEAGTDPLLVTATEALVLD-EADSKP-APQADEPPLQPP----GESAR 90 100 110 120 130 140 90 100 110 120 130 KIAA19 SPEAVGPELEAEEKLSVRVAES-------AAAAPQGGPELPPSPASPPEQ--PPAPEERE :: :.::::: ::: : : :..:::: :: : .: :::. ::::: gi|126 SPGAAGPELEPEEKPLDRPEEREPEEEGEATTAPQG-PE-PSTPPPPPEEGKEPAPEEPP 150 160 170 180 190 200 140 150 160 170 180 190 KIAA19 EPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLDHIIEDALVVSFRFGEKLFSGVLMD :: :: ..:::::::::::.:.:::::::::::::::::::::::::.::::::::::: gi|126 PPPQPQSAVPALVPPAGGDSAVAQLIPGSEVRVTLDHIIEDALVVSFRLGEKLFSGVLMD 210 220 230 240 250 260 200 210 220 230 240 250 KIAA19 LSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTFQEGTEVKCEANGAVPDDPSPVPHPEL :::::::::::::.::::::::::::: ::: .::::::.::. ::: ::: ::. :: gi|126 LSKRFGPHGIPVTIFPKREYKDKPEAMQLQSRSFQEGTEIKCDMNGAGPDDHSPIQPPEP 270 280 290 300 310 320 260 270 280 290 300 310 KIAA19 SLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRKMYREEPTSIMN :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SLAKSLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRKMYREEPTSIMN 330 340 350 360 370 380 320 330 340 350 360 370 KIAA19 AIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYED-KKRRNESVTTVNKKLKTDHK :::::::::::::::::::::::::.::..:.:::::.: :::::::::::::::::::: gi|126 AIKLRPRQVLCDKCKNSVVAEKKEIKKGGNASDSSKYDDNKKRRNESVTTVNKKLKTDHK 390 400 410 420 430 440 380 390 400 410 420 430 KIAA19 VDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANTSKAQLSTKKVLQSKNMDHAKARE .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 MDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANTSKAQLSTKKVLQSKNMDHAKARE 450 460 470 480 490 500 440 KIAA19 VLKIA :::.: gi|126 VLKMAKEKAQKKQSETSTSKNAHSKVHFTRRFQNTSSGSLPPRLRLKPQRYRNEENDSSL 510 520 530 540 550 560 >>gi|123227605|emb|CAM20714.1| PWWP domain containing 2A (533 aa) initn: 1535 init1: 749 opt: 1886 Z-score: 1457.8 bits: 279.2 E(): 1.7e-72 Smith-Waterman score: 2297; 83.333% identity (88.356% similar) in 438 aa overlap (7-441:1-408) 10 20 30 40 50 60 KIAA19 GEARKKMAAVAAEAAATAASPGEGGAGEAEPEMEPIPGSEAGTDPLPVTATEASVPDGET ::::::::::::::::::::::::::.:::::::::: :::::::::.:::::. gi|123 MAAVAAEAAATAASPGEGGAGEAEPELEPIPGSEAGT-PLPVTATEAAVPDGEA 10 20 30 40 50 70 80 90 100 110 KIAA19 DGQQSAPQADEPPLPPPPPPP--GELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPE ::.:::::::: ::::::::: :::: : :: :: : : :: gi|123 DGRQSAPQADEQPLPPPPPPPPPGELADSSEA-------EE-----------AKP---PE 60 70 80 90 120 130 140 150 160 170 KIAA19 LPPSPASPPEQPPA-PEEREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLDHIIE :.:::::::: ::. :. : : : ::::::::::::.::.:::::::::::::::: gi|123 PAAVPVSPPEQPPAAPEQPEDAPRPPP-APALVPPAGGDSAVSHLIPGSEVRVTLDHIIE 100 110 120 130 140 150 180 190 200 210 220 230 KIAA19 DALVVSFRFGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTFQEGTEV ::::::::.:::::::::::::::::::::::::::::::::::.:: :::.::::: :: gi|123 DALVVSFRLGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPDAMQLQSTTFQEGIEV 160 170 180 190 200 210 240 250 260 270 280 290 KIAA19 KCEANGAVPDDPSPVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPP : :.::::::: :::: :: ::.:::::::::::::::::::::::::::::::: gi|123 KQEVNGAVPDDLSPVPPPE-----RLWASKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPP 220 230 240 250 260 300 310 320 330 340 350 KIAA19 RKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYEDK :::::::::::::::::::::::::::::::::::::::::::::::::: :::.:::: gi|123 RKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSS--DSSRYEDK 270 280 290 300 310 320 360 370 380 390 400 410 KIAA19 KRRNESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANTSKAQ ::::.::.:::::::::::::::::::::.::.::.::.::::::::::::::::::::: gi|123 KRRNDSVATVNKKLKTDHKVDGKNQNESQRRNTVVRVSSIAHSRGRVVKVSAQANTSKAQ 330 340 350 360 370 380 420 430 440 KIAA19 LSTKKVLQSKNMDHAKAREVLKIA :.:::::::::::::::::::::: gi|123 LNTKKVLQSKNMDHAKAREVLKIAKEKAQKKQSETSTSKTAHAKVHFTRRYQSPSSGSLP 390 400 410 420 430 440 >>gi|160419227|sp|Q69Z61.2|PWP2A_MOUSE RecName: Full=PWW (730 aa) initn: 1535 init1: 749 opt: 1886 Z-score: 1456.1 bits: 279.3 E(): 2.1e-72 Smith-Waterman score: 2297; 83.333% identity (88.356% similar) in 438 aa overlap (7-441:1-408) 10 20 30 40 50 60 KIAA19 GEARKKMAAVAAEAAATAASPGEGGAGEAEPEMEPIPGSEAGTDPLPVTATEASVPDGET ::::::::::::::::::::::::::.:::::::::: :::::::::.:::::. gi|160 MAAVAAEAAATAASPGEGGAGEAEPELEPIPGSEAGT-PLPVTATEAAVPDGEA 10 20 30 40 50 70 80 90 100 110 KIAA19 DGQQSAPQADEPPLPPPPPPP--GELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPE ::.:::::::: ::::::::: :::: : :: :: : : :: gi|160 DGRQSAPQADEQPLPPPPPPPPPGELADSSEA-------EE-----------AKP---PE 60 70 80 90 120 130 140 150 160 170 KIAA19 LPPSPASPPEQPPA-PEEREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLDHIIE :.:::::::: ::. :. : : : ::::::::::::.::.:::::::::::::::: gi|160 PAAVPVSPPEQPPAAPEQPEDAPRPPP-APALVPPAGGDSAVSHLIPGSEVRVTLDHIIE 100 110 120 130 140 150 180 190 200 210 220 230 KIAA19 DALVVSFRFGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTFQEGTEV ::::::::.:::::::::::::::::::::::::::::::::::.:: :::.::::: :: gi|160 DALVVSFRLGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPDAMQLQSTTFQEGIEV 160 170 180 190 200 210 240 250 260 270 280 290 KIAA19 KCEANGAVPDDPSPVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPP : :.::::::: :::: :: ::.:::::::::::::::::::::::::::::::: gi|160 KQEVNGAVPDDLSPVPPPE-----RLWASKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPP 220 230 240 250 260 300 310 320 330 340 350 KIAA19 RKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYEDK :::::::::::::::::::::::::::::::::::::::::::::::::: :::.:::: gi|160 RKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSS--DSSRYEDK 270 280 290 300 310 320 360 370 380 390 400 410 KIAA19 KRRNESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANTSKAQ ::::.::.:::::::::::::::::::::.::.::.::.::::::::::::::::::::: gi|160 KRRNDSVATVNKKLKTDHKVDGKNQNESQRRNTVVRVSSIAHSRGRVVKVSAQANTSKAQ 330 340 350 360 370 380 420 430 440 KIAA19 LSTKKVLQSKNMDHAKAREVLKIA :.:::::::::::::::::::::: gi|160 LNTKKVLQSKNMDHAKAREVLKIAKEKAQKKQSETSTSKTAHAKVHFTRRYQSPSSGSLP 390 400 410 420 430 440 >>gi|187469485|gb|AAI66858.1| Pwwp2a protein [Rattus nor (533 aa) initn: 1504 init1: 723 opt: 1859 Z-score: 1437.1 bits: 275.3 E(): 2.4e-71 Smith-Waterman score: 2270; 82.420% identity (87.443% similar) in 438 aa overlap (7-441:1-408) 10 20 30 40 50 60 KIAA19 GEARKKMAAVAAEAAATAASPGEGGAGEAEPEMEPIPGSEAGTDPLPVTATEASVPDGET ::::::::::::::::.:::::::::.:::::::::: :::::::::.:::::. gi|187 MAAVAAEAAATAASPGDGGAGEAEPELEPIPGSEAGT-PLPVTATEAAVPDGEA 10 20 30 40 50 70 80 90 100 110 KIAA19 DGQQSAPQADEPPLPPPPPPP--GELARSPEAVGPELEAEEKLSVRVAESAAAAPQGGPE ::.:::::::: ::::::::: :::: : :: :: : : :: gi|187 DGRQSAPQADEQPLPPPPPPPPPGELAGSSEA-------EE-----------AKP---PE 60 70 80 90 120 130 140 150 160 170 KIAA19 LPPSPASPPEQPPA-PEEREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLDHIIE :. ::::::: ::. :. : : : ::::::::::::.::.:::::::::::::::: gi|187 PAAVPVPPPEQPPAAPEQPEDAPRPPP-APALVPPAGGDSAVSHLIPGSEVRVTLDHIIE 100 110 120 130 140 150 180 190 200 210 220 230 KIAA19 DALVVSFRFGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTFQEGTEV ::::::::.:::::::::::::::::::::::::::::: ::::.:: ::::::::: :: gi|187 DALVVSFRLGEKLFSGVLMDLSKRFGPHGIPVTVFPKRECKDKPDAMQLQSNTFQEGIEV 160 170 180 190 200 210 240 250 260 270 280 290 KIAA19 KCEANGAVPDDPSPVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPP : :.:::.:: :::: :. ::::::::::::::::::::::::::::::::::: gi|187 KREVNGAIPDALSPVPPPD-----CLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPP 220 230 240 250 260 300 310 320 330 340 350 KIAA19 RKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYEDK :::::::::::::::::::::::::::::::::::::::::::::::::: :::.:::: gi|187 RKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSS--DSSRYEDK 270 280 290 300 310 320 360 370 380 390 400 410 KIAA19 KRRNESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANTSKAQ ::::.::.:::::::::::::::::::::.:::::.::.: ::::::::::::::::::: gi|187 KRRNDSVATVNKKLKTDHKVDGKNQNESQRRNAVVRVSSIPHSRGRVVKVSAQANTSKAQ 330 340 350 360 370 380 420 430 440 KIAA19 LSTKKVLQSKNMDHAKAREVLKIA :.:::::::::::::::::::::: gi|187 LNTKKVLQSKNMDHAKAREVLKIAKEKAQKKQSETSTSKNAHSKVHFTRRYQNPSSGSLP 390 400 410 420 430 440 >>gi|148701907|gb|EDL33854.1| mCG51512, isoform CRA_b [M (378 aa) initn: 1213 init1: 668 opt: 1756 Z-score: 1360.1 bits: 260.6 E(): 4.7e-67 Smith-Waterman score: 1756; 90.268% identity (95.302% similar) in 298 aa overlap (144-441:3-293) 120 130 140 150 160 170 KIAA19 QGGPELPPSPASPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLD : ::::::::::::.::.:::::::::::: gi|148 RPPPAPALVPPAGGDSAVSHLIPGSEVRVTLD 10 20 30 180 190 200 210 220 230 KIAA19 HIIEDALVVSFRFGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTFQE ::::::::::::.:::::::::::::::::::::::::::::::::::.:: :::.:::: gi|148 HIIEDALVVSFRLGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPDAMQLQSTTFQE 40 50 60 70 80 90 240 250 260 270 280 290 KIAA19 GTEVKCEANGAVPDDPSPVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIP : ::: :.::::::: :::: :: ::.:::::::::::::::::::::::::::: gi|148 GIEVKQEVNGAVPDDLSPVPPPE-----RLWASKPPPLFHEGAPYPPPLFIRDTYNQSIP 100 110 120 130 140 300 310 320 330 340 350 KIAA19 QPPPRKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSK :::::::::::::::::::::::::::::::::::::::::::::::::::::: :::. gi|148 QPPPRKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSS--DSSR 150 160 170 180 190 200 360 370 380 390 400 410 KIAA19 YEDKKRRNESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRGRVVKVSAQANT ::::::::.::.:::::::::::::::::::::.::.::.::.::::::::::::::::: gi|148 YEDKKRRNDSVATVNKKLKTDHKVDGKNQNESQRRNTVVRVSSIAHSRGRVVKVSAQANT 210 220 230 240 250 260 420 430 440 KIAA19 SKAQLSTKKVLQSKNMDHAKAREVLKIA :::::.:::::::::::::::::::::: gi|148 SKAQLNTKKVLQSKNMDHAKAREVLKIAKEKAQKKQSETSTSKTAHAKVHFTRRYQSPSS 270 280 290 300 310 320 >>gi|194219644|ref|XP_001917472.1| PREDICTED: similar to (648 aa) initn: 1608 init1: 1538 opt: 1549 Z-score: 1198.7 bits: 231.5 E(): 4.6e-58 Smith-Waterman score: 1552; 78.233% identity (84.227% similar) in 317 aa overlap (130-441:25-328) 100 110 120 130 140 150 KIAA19 KLSVRVAESAAAAPQGGPELPPSPASPPEQPPAPEEREEPP-----LPQPVAPALVPPAG ::: :. :: : :. :. : gi|194 MVPSGAQSLENFWILSLLSTRSLNPPAREHAPPPPQGPGGLTGPLREAVNSP-- 10 20 30 40 50 160 170 180 190 200 210 KIAA19 GDSTVSQLIPGSEVRVTLDHIIEDALVVSFRFGEKLFSGVLMDLSKRFGPHGIPVTVFPK ..: .: . .... . ..:. . : : :::::::::::::: gi|194 -HRPIDQGLPVRRSDISFNPVT----ITSLSTHLSHF------LPGRFGPHGIPVTVFPK 60 70 80 90 100 220 230 240 250 260 270 KIAA19 REYKDKPEAMPLQSNTFQEGTEVKCEANGAVPDDPSPVPHPELSLAESLWTSKPPPLFHE :::::::::: ::::::::::::. ::.:::: :::::: :: ::::::::::::::::: gi|194 REYKDKPEAMQLQSNTFQEGTEVQREASGAVPGDPSPVPPPEPSLAESLWTSKPPPLFHE 110 120 130 140 150 160 280 290 300 310 320 330 KIAA19 GAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNS 170 180 190 200 210 220 340 350 360 370 380 390 KIAA19 VVAEKKEIRKGSSATDSSKYEDKKRRNESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKV ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|194 VVAEKKEIRKGSSASDSSKYEDKKRRNESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKV 230 240 250 260 270 280 400 410 420 430 440 KIAA19 SNIAHSRGRVVKVSAQANTSKAQLSTKKVLQSKNMDHAKAREVLKIA ::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SNIAHSRGRVVKVSAQANTSKAQLSTKKVLQSKNMDHAKAREVLKIAKEKAQKKQSETST 290 300 310 320 330 340 gi|194 SKNAHSKVHFTRRYQNSSSGSLPPRVRLKPQRYRNEENDSSLKTGLEKMRSGKMAPKPQS 350 360 370 380 390 400 441 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Fri Mar 6 04:24:14 2009 done: Fri Mar 6 04:28:45 2009 Total Scan time: 1530.710 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]