# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fh11169.fasta.nr -Q ../query/KIAA1922.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1922, 370 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7815993 sequences Expectation_n fit: rho(ln(x))= 5.8967+/-0.000207; mu= 8.4516+/- 0.012 mean_var=141.3792+/-26.629, 0's: 37 Z-trim: 55 B-trim: 238 in 1/67 Lambda= 0.107865 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|74728061|sp|Q8IVE0.1|CROL2_HUMAN RecName: Full= ( 287) 1952 314.8 1.4e-83 gi|119850989|gb|AAI26913.1| CROCC protein [Homo sa (1132) 1449 237.2 1.3e-59 gi|119850659|gb|AAI26912.1| CROCC protein [Homo sa (1132) 1449 237.2 1.3e-59 gi|55666059|emb|CAH70057.1| ciliary rootlet coiled (1898) 1449 237.5 1.8e-59 gi|74746681|sp|Q5TZA2.1|CROCC_HUMAN RecName: Full= (2017) 1449 237.5 1.8e-59 gi|51536418|tpg|DAA05505.1| TPA: TPA_exp: rootleti (2017) 1449 237.5 1.8e-59 gi|114554294|ref|XP_513109.2| PREDICTED: ciliary r (2017) 1449 237.5 1.8e-59 gi|119615223|gb|EAW94817.1| ciliary rootlet coiled ( 626) 1438 235.2 2.8e-59 gi|119615220|gb|EAW94814.1| ciliary rootlet coiled (1745) 1438 235.7 5.5e-59 gi|32449692|gb|AAH54054.1| Crocc protein [Mus musc (1845) 1235 204.2 1.8e-49 gi|123265692|emb|CAM16756.1| ciliary rootlet coile (1845) 1235 204.2 1.8e-49 gi|81900535|sp|Q8CJ40.1|CROCC_MOUSE RecName: Full= (2009) 1235 204.2 1.9e-49 gi|123265693|emb|CAM16757.1| ciliary rootlet coile (2009) 1235 204.2 1.9e-49 gi|119615222|gb|EAW94816.1| ciliary rootlet coiled ( 427) 1136 188.0 3.1e-45 gi|194207987|ref|XP_001914826.1| PREDICTED: simila (1752) 924 155.8 6.6e-35 gi|109132427|ref|XP_001100173.1| PREDICTED: simila ( 284) 702 120.3 5.2e-25 gi|73950721|ref|XP_544542.2| PREDICTED: similar to (1316) 624 108.9 6.2e-21 gi|198419926|ref|XP_002119303.1| PREDICTED: simila (2051) 608 106.7 4.6e-20 gi|21748516|dbj|BAC03395.1| FLJ00313 protein [Homo ( 208) 590 102.7 7.5e-20 gi|115755852|ref|XP_001200030.1| PREDICTED: simila ( 438) 510 90.6 6.7e-16 gi|149411477|ref|XP_001513460.1| PREDICTED: simila (1922) 455 82.8 6.5e-13 gi|189520245|ref|XP_688293.3| PREDICTED: similar t (1762) 399 74.1 2.6e-10 gi|169161750|ref|XP_001732878.1| PREDICTED: simila ( 679) 391 72.3 3.3e-10 gi|119615376|gb|EAW94970.1| hCG2040315 [Homo sapie ( 208) 378 69.7 6.4e-10 gi|109486390|ref|XP_001062844.1| PREDICTED: simila (1625) 389 72.5 7.2e-10 gi|109487543|ref|XP_001068827.1| PREDICTED: simila (1735) 389 72.5 7.5e-10 gi|47229657|emb|CAG06853.1| unnamed protein produc ( 982) 366 68.6 6.3e-09 gi|109101712|ref|XP_001108519.1| PREDICTED: simila ( 519) 359 67.2 8.9e-09 gi|114584353|ref|XP_516202.2| PREDICTED: similar t (2011) 360 68.1 1.9e-08 gi|73992291|ref|XP_542975.2| PREDICTED: similar to (2439) 338 64.7 2.3e-07 gi|75905849|gb|ABA29340.1| centrosomal protein 2 [ (2414) 329 63.3 6e-07 gi|187956527|gb|AAI50747.1| Centrosomal protein 25 (2414) 329 63.3 6e-07 gi|108935830|sp|Q60952.3|CP250_MOUSE RecName: Full (2414) 329 63.3 6e-07 gi|80861458|ref|NP_001030595.1| centrosomal protei (2386) 320 61.9 1.6e-06 gi|30580364|sp|Q9BV73.2|CP250_HUMAN RecName: Full= (2442) 320 61.9 1.6e-06 gi|2832237|gb|AAC06349.1| cep250 centrosome associ (2442) 318 61.6 2e-06 gi|189458800|ref|NP_032409.3| centrosomal protein (2414) 317 61.5 2.2e-06 gi|2984657|gb|AAC07988.1| centrosomal Nek2-associa (2442) 316 61.3 2.5e-06 gi|109092211|ref|XP_001099401.1| PREDICTED: simila (2385) 314 61.0 3e-06 gi|164623745|gb|ABY64671.1| centrosomal protein 25 (2441) 314 61.0 3e-06 gi|109092209|ref|XP_001099508.1| PREDICTED: simila (2441) 314 61.0 3e-06 gi|194224356|ref|XP_001916455.1| PREDICTED: centro (2306) 313 60.8 3.3e-06 gi|114693940|ref|XP_524537.2| PREDICTED: similar t ( 97) 292 55.9 4.2e-06 gi|119596611|gb|EAW76205.1| centrosomal protein 25 (2442) 311 60.5 4.2e-06 gi|166831591|gb|ABY90116.1| centrosomal protein 2 ( 635) 300 58.1 5.9e-06 gi|197215641|gb|ACH53033.1| centrosome-associated (2316) 305 59.6 7.8e-06 gi|194044513|ref|XP_001929444.1| PREDICTED: centro (2384) 305 59.6 7.9e-06 gi|194044511|ref|XP_001929443.1| PREDICTED: centro (2440) 305 59.6 8e-06 gi|169731513|gb|ACA64885.1| centrosomal protein 2 (2267) 303 59.3 9.5e-06 gi|68125326|emb|CAJ03172.1| kinesin K39, putative (2976) 299 58.8 1.7e-05 >>gi|74728061|sp|Q8IVE0.1|CROL2_HUMAN RecName: Full=Cili (287 aa) initn: 1952 init1: 1952 opt: 1952 Z-score: 1656.5 bits: 314.8 E(): 1.4e-83 Smith-Waterman score: 1952; 100.000% identity (100.000% similar) in 287 aa overlap (84-370:1-287) 60 70 80 90 100 110 KIAA19 RRGPSPACSDSSTLALIHSTLHKHELQVQDMRGRYEASQDLLGTLRKQLSDSESERRALE :::::::::::::::::::::::::::::: gi|747 MRGRYEASQDLLGTLRKQLSDSESERRALE 10 20 30 120 130 140 150 160 170 KIAA19 EQLQRLRDKTDSTMQAHEDAQREVQRLRSAKELLRREKSNLAHSLQVAQQQAKELRQERK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 EQLQRLRDKTDSTMQAHEDAQREVQRLRSAKELLRREKSNLAHSLQVAQQQAKELRQERK 40 50 60 70 80 90 180 190 200 210 220 230 KIAA19 KLQAAQEELRRQRYWLGEEQEDAVQDGVRVRRELERSHRQLEQLEGKRSVLAKELVEVRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 KLQAAQEELRRQRYWLGEEQEDAVQDGVRVRRELERSHRQLEQLEGKRSVLAKELVEVRE 100 110 120 130 140 150 240 250 260 270 280 290 KIAA19 ALSRATLQRDMLQAEKAEVAEALTKAEGRGGLPAGLPVQAERPQREPCSGQVGSEPPCHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 ALSRATLQRDMLQAEKAEVAEALTKAEGRGGLPAGLPVQAERPQREPCSGQVGSEPPCHP 160 170 180 190 200 210 300 310 320 330 340 350 KIAA19 GHSWRKKSAPCRAGSGRRSRRPQWHGKSRSGWRRCGWNRRWRGRAWRAPYERRSRPRRQW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 GHSWRKKSAPCRAGSGRRSRRPQWHGKSRSGWRRCGWNRRWRGRAWRAPYERRSRPRRQW 220 230 240 250 260 270 360 370 KIAA19 SSSSPRCIMSAAGCRSS ::::::::::::::::: gi|747 SSSSPRCIMSAAGCRSS 280 >>gi|119850989|gb|AAI26913.1| CROCC protein [Homo sapien (1132 aa) initn: 1446 init1: 1446 opt: 1449 Z-score: 1226.7 bits: 237.2 E(): 1.3e-59 Smith-Waterman score: 1449; 91.732% identity (97.244% similar) in 254 aa overlap (10-262:327-580) 10 20 30 KIAA19 GTWHSPSCRTQSGVQLSGSKRTADDSFGSLRGLSAQQTP ..::::::::.:::: : :::::::.:.:: gi|119 RLQEQAALETEDGEGLQQTLRDLAQAVLSDSESGVQLSGSERTADASNGSLRGLSGQRTP 300 310 320 330 340 350 40 50 60 70 80 90 KIAA19 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSTLHKHELQVQDMRGRYEASQDLLGTLR :::::::::::::::::::::::::::::::::.:::..::::::::::::::::::::: gi|119 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLR 360 370 380 390 400 410 100 110 120 130 140 150 KIAA19 KQLSDSESERRALEEQLQRLRDKTDSTMQAHEDAQREVQRLRSAKELLRREKSNLAHSLQ :::::::::::::::::::::::::..:::::::::::::::::.::: ::::::::::: gi|119 KQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQ 420 430 440 450 460 470 160 170 180 190 200 210 KIAA19 VAQQQAKELRQERKKLQAAQEELRRQRYWLGEEQEDAVQDGVRVRRELERSHRQLEQLEG ::::::.::::::.::::::::::::: : ::::::::::.:::::::::::::::::: gi|119 VAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEG 480 490 500 510 520 530 220 230 240 250 260 270 KIAA19 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAE-GRGGLPAGLPVQAERPQR ::::::::::::::::::::::::::::::::::::::::: :: gi|119 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEAS 540 550 560 570 580 590 280 290 300 310 320 330 KIAA19 EPCSGQVGSEPPCHPGHSWRKKSAPCRAGSGRRSRRPQWHGKSRSGWRRCGWNRRWRGRA gi|119 LQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEEL 600 610 620 630 640 650 >>gi|119850659|gb|AAI26912.1| CROCC protein [Homo sapien (1132 aa) initn: 1446 init1: 1446 opt: 1449 Z-score: 1226.7 bits: 237.2 E(): 1.3e-59 Smith-Waterman score: 1449; 91.732% identity (97.244% similar) in 254 aa overlap (10-262:327-580) 10 20 30 KIAA19 GTWHSPSCRTQSGVQLSGSKRTADDSFGSLRGLSAQQTP ..::::::::.:::: : :::::::.:.:: gi|119 RLQEQAALETEDGEGLQQTLRDLAQAVLSDSESGVQLSGSERTADASNGSLRGLSGQRTP 300 310 320 330 340 350 40 50 60 70 80 90 KIAA19 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSTLHKHELQVQDMRGRYEASQDLLGTLR :::::::::::::::::::::::::::::::::.:::..::::::::::::::::::::: gi|119 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLR 360 370 380 390 400 410 100 110 120 130 140 150 KIAA19 KQLSDSESERRALEEQLQRLRDKTDSTMQAHEDAQREVQRLRSAKELLRREKSNLAHSLQ :::::::::::::::::::::::::..:::::::::::::::::.::: ::::::::::: gi|119 KQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQ 420 430 440 450 460 470 160 170 180 190 200 210 KIAA19 VAQQQAKELRQERKKLQAAQEELRRQRYWLGEEQEDAVQDGVRVRRELERSHRQLEQLEG ::::::.::::::.::::::::::::: : ::::::::::.:::::::::::::::::: gi|119 VAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEG 480 490 500 510 520 530 220 230 240 250 260 270 KIAA19 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAE-GRGGLPAGLPVQAERPQR ::::::::::::::::::::::::::::::::::::::::: :: gi|119 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEAS 540 550 560 570 580 590 280 290 300 310 320 330 KIAA19 EPCSGQVGSEPPCHPGHSWRKKSAPCRAGSGRRSRRPQWHGKSRSGWRRCGWNRRWRGRA gi|119 LQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEEL 600 610 620 630 640 650 >>gi|55666059|emb|CAH70057.1| ciliary rootlet coiled-coi (1898 aa) initn: 1446 init1: 1446 opt: 1449 Z-score: 1224.1 bits: 237.5 E(): 1.8e-59 Smith-Waterman score: 1449; 91.732% identity (97.244% similar) in 254 aa overlap (10-262:345-598) 10 20 30 KIAA19 GTWHSPSCRTQSGVQLSGSKRTADDSFGSLRGLSAQQTP ..::::::::.:::: : :::::::.:.:: gi|556 RLQEQAALETEDGEGLQQTLRDLAQAVLSDSESGVQLSGSERTADASNGSLRGLSGQRTP 320 330 340 350 360 370 40 50 60 70 80 90 KIAA19 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSTLHKHELQVQDMRGRYEASQDLLGTLR :::::::::::::::::::::::::::::::::.:::..::::::::::::::::::::: gi|556 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLR 380 390 400 410 420 430 100 110 120 130 140 150 KIAA19 KQLSDSESERRALEEQLQRLRDKTDSTMQAHEDAQREVQRLRSAKELLRREKSNLAHSLQ :::::::::::::::::::::::::..:::::::::::::::::.::: ::::::::::: gi|556 KQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQ 440 450 460 470 480 490 160 170 180 190 200 210 KIAA19 VAQQQAKELRQERKKLQAAQEELRRQRYWLGEEQEDAVQDGVRVRRELERSHRQLEQLEG ::::::.::::::.::::::::::::: : ::::::::::.:::::::::::::::::: gi|556 VAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEG 500 510 520 530 540 550 220 230 240 250 260 270 KIAA19 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAE-GRGGLPAGLPVQAERPQR ::::::::::::::::::::::::::::::::::::::::: :: gi|556 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEAS 560 570 580 590 600 610 280 290 300 310 320 330 KIAA19 EPCSGQVGSEPPCHPGHSWRKKSAPCRAGSGRRSRRPQWHGKSRSGWRRCGWNRRWRGRA gi|556 LQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEEL 620 630 640 650 660 670 >>gi|74746681|sp|Q5TZA2.1|CROCC_HUMAN RecName: Full=Root (2017 aa) initn: 1446 init1: 1446 opt: 1449 Z-score: 1223.8 bits: 237.5 E(): 1.8e-59 Smith-Waterman score: 1449; 91.732% identity (97.244% similar) in 254 aa overlap (10-262:464-717) 10 20 30 KIAA19 GTWHSPSCRTQSGVQLSGSKRTADDSFGSLRGLSAQQTP ..::::::::.:::: : :::::::.:.:: gi|747 RLQEQAALETEDGEGLQQTLRDLAQAVLSDSESGVQLSGSERTADASNGSLRGLSGQRTP 440 450 460 470 480 490 40 50 60 70 80 90 KIAA19 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSTLHKHELQVQDMRGRYEASQDLLGTLR :::::::::::::::::::::::::::::::::.:::..::::::::::::::::::::: gi|747 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLR 500 510 520 530 540 550 100 110 120 130 140 150 KIAA19 KQLSDSESERRALEEQLQRLRDKTDSTMQAHEDAQREVQRLRSAKELLRREKSNLAHSLQ :::::::::::::::::::::::::..:::::::::::::::::.::: ::::::::::: gi|747 KQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQ 560 570 580 590 600 610 160 170 180 190 200 210 KIAA19 VAQQQAKELRQERKKLQAAQEELRRQRYWLGEEQEDAVQDGVRVRRELERSHRQLEQLEG ::::::.::::::.::::::::::::: : ::::::::::.:::::::::::::::::: gi|747 VAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEG 620 630 640 650 660 670 220 230 240 250 260 270 KIAA19 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAE-GRGGLPAGLPVQAERPQR ::::::::::::::::::::::::::::::::::::::::: :: gi|747 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEAS 680 690 700 710 720 730 280 290 300 310 320 330 KIAA19 EPCSGQVGSEPPCHPGHSWRKKSAPCRAGSGRRSRRPQWHGKSRSGWRRCGWNRRWRGRA gi|747 LQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEEL 740 750 760 770 780 790 >>gi|51536418|tpg|DAA05505.1| TPA: TPA_exp: rootletin [H (2017 aa) initn: 1446 init1: 1446 opt: 1449 Z-score: 1223.8 bits: 237.5 E(): 1.8e-59 Smith-Waterman score: 1449; 91.732% identity (97.244% similar) in 254 aa overlap (10-262:464-717) 10 20 30 KIAA19 GTWHSPSCRTQSGVQLSGSKRTADDSFGSLRGLSAQQTP ..::::::::.:::: : :::::::.:.:: gi|515 RLQEQAALETEDGEGLQQTLRDLAQAVLSDSESGVQLSGSERTADASNGSLRGLSGQRTP 440 450 460 470 480 490 40 50 60 70 80 90 KIAA19 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSTLHKHELQVQDMRGRYEASQDLLGTLR :::::::::::::::::::::::::::::::::.:::..::::::::::::::::::::: gi|515 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLR 500 510 520 530 540 550 100 110 120 130 140 150 KIAA19 KQLSDSESERRALEEQLQRLRDKTDSTMQAHEDAQREVQRLRSAKELLRREKSNLAHSLQ :::::::::::::::::::::::::..:::::::::::::::::.::: ::::::::::: gi|515 KQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQ 560 570 580 590 600 610 160 170 180 190 200 210 KIAA19 VAQQQAKELRQERKKLQAAQEELRRQRYWLGEEQEDAVQDGVRVRRELERSHRQLEQLEG ::::::.::::::.::::::::::::: : ::::::::::.:::::::::::::::::: gi|515 VAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEG 620 630 640 650 660 670 220 230 240 250 260 270 KIAA19 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAE-GRGGLPAGLPVQAERPQR ::::::::::::::::::::::::::::::::::::::::: :: gi|515 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEAS 680 690 700 710 720 730 280 290 300 310 320 330 KIAA19 EPCSGQVGSEPPCHPGHSWRKKSAPCRAGSGRRSRRPQWHGKSRSGWRRCGWNRRWRGRA gi|515 LQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEEL 740 750 760 770 780 790 >>gi|114554294|ref|XP_513109.2| PREDICTED: ciliary rootl (2017 aa) initn: 1446 init1: 1446 opt: 1449 Z-score: 1223.8 bits: 237.5 E(): 1.8e-59 Smith-Waterman score: 1449; 91.732% identity (97.244% similar) in 254 aa overlap (10-262:464-717) 10 20 30 KIAA19 GTWHSPSCRTQSGVQLSGSKRTADDSFGSLRGLSAQQTP ..::::::::.:::: : :::::::.:.:: gi|114 RLQEQAALETEDGEGLQQTLRDLAQAVLSDSESGVQLSGSERTADASNGSLRGLSGQRTP 440 450 460 470 480 490 40 50 60 70 80 90 KIAA19 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSTLHKHELQVQDMRGRYEASQDLLGTLR :::::::::::::::::::::::::::::::::.:::..::::::::::::::::::::: gi|114 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLR 500 510 520 530 540 550 100 110 120 130 140 150 KIAA19 KQLSDSESERRALEEQLQRLRDKTDSTMQAHEDAQREVQRLRSAKELLRREKSNLAHSLQ :::::::::::::::::::::::::..:::::::::::::::::.::: ::::::::::: gi|114 KQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQ 560 570 580 590 600 610 160 170 180 190 200 210 KIAA19 VAQQQAKELRQERKKLQAAQEELRRQRYWLGEEQEDAVQDGVRVRRELERSHRQLEQLEG ::::::.::::::.::::::::::::: : ::::::::::::::::::::::::::::: gi|114 VAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGVRVRRELERSHRQLEQLEG 620 630 640 650 660 670 220 230 240 250 260 270 KIAA19 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAE-GRGGLPAGLPVQAERPQR ::::::::::::::::::::::::::::::.:::::::::: :: gi|114 KRSVLAKELVEVREALSRATLQRDMLQAEKTEVAEALTKAEAGRVELELSMTRLRAEEAS 680 690 700 710 720 730 280 290 300 310 320 330 KIAA19 EPCSGQVGSEPPCHPGHSWRKKSAPCRAGSGRRSRRPQWHGKSRSGWRRCGWNRRWRGRA gi|114 LQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEEL 740 750 760 770 780 790 >>gi|119615223|gb|EAW94817.1| ciliary rootlet coiled-coi (626 aa) initn: 1435 init1: 1435 opt: 1438 Z-score: 1220.3 bits: 235.2 E(): 2.8e-59 Smith-Waterman score: 1438; 91.339% identity (96.850% similar) in 254 aa overlap (10-262:227-480) 10 20 30 KIAA19 GTWHSPSCRTQSGVQLSGSKRTADDSFGSLRGLSAQQTP ..::::::::.:::: : :::::::.:.:: gi|119 RLQEQAALETEDGEGLQQTLRDLAQAVLSDSESGVQLSGSERTADASNGSLRGLSGQRTP 200 210 220 230 240 250 40 50 60 70 80 90 KIAA19 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSTLHKHELQVQDMRGRYEASQDLLGTLR ::::::::::::::::: :::::::::::::::.:::..::::::::::::::::::::: gi|119 SPPRRSSPGRGRSPRRGSSPACSDSSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLR 260 270 280 290 300 310 100 110 120 130 140 150 KIAA19 KQLSDSESERRALEEQLQRLRDKTDSTMQAHEDAQREVQRLRSAKELLRREKSNLAHSLQ :::::::::::::::::::::::::..:::::::::::::::::.::: ::::::::::: gi|119 KQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQ 320 330 340 350 360 370 160 170 180 190 200 210 KIAA19 VAQQQAKELRQERKKLQAAQEELRRQRYWLGEEQEDAVQDGVRVRRELERSHRQLEQLEG ::::::.::::::.::::::::::::: : ::::::::::.:::::::::::::::::: gi|119 VAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEG 380 390 400 410 420 430 220 230 240 250 260 270 KIAA19 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAE-GRGGLPAGLPVQAERPQR ::::::::::::::::::::::::::::::::::::::::: :: gi|119 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEAS 440 450 460 470 480 490 280 290 300 310 320 330 KIAA19 EPCSGQVGSEPPCHPGHSWRKKSAPCRAGSGRRSRRPQWHGKSRSGWRRCGWNRRWRGRA gi|119 LQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEEL 500 510 520 530 540 550 >>gi|119615220|gb|EAW94814.1| ciliary rootlet coiled-coi (1745 aa) initn: 1435 init1: 1435 opt: 1438 Z-score: 1215.3 bits: 235.7 E(): 5.5e-59 Smith-Waterman score: 1438; 91.339% identity (96.850% similar) in 254 aa overlap (10-262:199-452) 10 20 30 KIAA19 GTWHSPSCRTQSGVQLSGSKRTADDSFGSLRGLSAQQTP ..::::::::.:::: : :::::::.:.:: gi|119 VKRLEKQNLEKDQVNKDLTEKLEALAVLSDSESGVQLSGSERTADASNGSLRGLSGQRTP 170 180 190 200 210 220 40 50 60 70 80 90 KIAA19 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSTLHKHELQVQDMRGRYEASQDLLGTLR ::::::::::::::::: :::::::::::::::.:::..::::::::::::::::::::: gi|119 SPPRRSSPGRGRSPRRGSSPACSDSSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLR 230 240 250 260 270 280 100 110 120 130 140 150 KIAA19 KQLSDSESERRALEEQLQRLRDKTDSTMQAHEDAQREVQRLRSAKELLRREKSNLAHSLQ :::::::::::::::::::::::::..:::::::::::::::::.::: ::::::::::: gi|119 KQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQ 290 300 310 320 330 340 160 170 180 190 200 210 KIAA19 VAQQQAKELRQERKKLQAAQEELRRQRYWLGEEQEDAVQDGVRVRRELERSHRQLEQLEG ::::::.::::::.::::::::::::: : ::::::::::.:::::::::::::::::: gi|119 VAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEG 350 360 370 380 390 400 220 230 240 250 260 270 KIAA19 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAE-GRGGLPAGLPVQAERPQR ::::::::::::::::::::::::::::::::::::::::: :: gi|119 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEAS 410 420 430 440 450 460 280 290 300 310 320 330 KIAA19 EPCSGQVGSEPPCHPGHSWRKKSAPCRAGSGRRSRRPQWHGKSRSGWRRCGWNRRWRGRA gi|119 LQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEEL 470 480 490 500 510 520 >>gi|32449692|gb|AAH54054.1| Crocc protein [Mus musculus (1845 aa) initn: 1092 init1: 1092 opt: 1235 Z-score: 1044.3 bits: 204.2 E(): 1.8e-49 Smith-Waterman score: 1235; 77.395% identity (92.337% similar) in 261 aa overlap (10-269:302-561) 10 20 30 KIAA19 GTWHSPSCRTQSGVQLSGSKRTADDSFGSLRGLSAQQTP :.::::::.:.:::: : :::::.:.:.:: gi|324 RLQEQTTLDTEDGEGLQQTLRDLAQAALSDTESGVQLSSSERTADTSDGSLRGFSGQRTP 280 290 300 310 320 330 40 50 60 70 80 90 KIAA19 SPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSTLHKHELQVQDMRGRYEASQDLLGTLR .:::.: :::::::::: ::::::::::.::::.:::..::::::::::::::.:::..: gi|324 TPPRHS-PGRGRSPRRGLSPACSDSSTLTLIHSALHKRQLQVQDMRGRYEASQELLGSVR 340 350 360 370 380 390 100 110 120 130 140 150 KIAA19 KQLSDSESERRALEEQLQRLRDKTDSTMQAHEDAQREVQRLRSAKELLRREKSNLAHSLQ :::::::.:::.::::::::::.: .. ::.::::::.::::::.::: :::.::.:::: gi|324 KQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGNLTHSLQ 400 410 420 430 440 450 160 170 180 190 200 210 KIAA19 VAQQQAKELRQERKKLQAAQEELRRQRYWLGEEQEDAVQDGVRVRRELERSHRQLEQLEG :.:::::::::: .:::::::::.::. : . :::.::.:.:.::::::::::::::: gi|324 VTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEV 460 470 480 490 500 510 220 230 240 250 260 270 KIAA19 KRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAE-GRGGLPAGLPVQAERPQR ::: :.::::::::::: : ::::.::.::::::::::::: ::. : .: gi|324 KRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEAS 520 530 540 550 560 570 280 290 300 310 320 330 KIAA19 EPCSGQVGSEPPCHPGHSWRKKSAPCRAGSGRRSRRPQWHGKSRSGWRRCGWNRRWRGRA gi|324 LRDSLSKMSALNESLAQDKLELNRLIAQLEEEKVALLGRQQQAEHATTMAVEKQELLEQL 580 590 600 610 620 630 370 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Fri Mar 6 03:30:59 2009 done: Fri Mar 6 03:36:00 2009 Total Scan time: 1481.570 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]