hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-16324420/chunk_1/iprscan-20080502-16324420.nocrc
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Query sequence: KIAA1919
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07690.6.fs Major Facilitator Superfamily                   32.1      7e-09   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07690.6.fs   1/1      78   263 ..   185   397 .]    32.1    7e-09

Alignments of top-scoring domains:
PF07690.6.fs: domain 1 of 1, from 78 to 263: score 32.1, E = 7e-09
                   *->lallaallllvlfllpeppakasgkpeeeeagialr.lll.p.llli
                      ++l+++++  ++++l+++ +++++++++e    ++r    +  l+l+
    KIAA1919    78    MFLVSVIF--FCLFLKNSSKQEKARASAET---FRRaKYHnAlLCLL 119  

                   llalflllaaflalltflplylllpllls.saglslsalaagllllalgl
                    l++f++++a +++++++ ++ ++  ++ +s++++l  +  g + ++ gl
    KIAA1919   120 FLFFFFYVGAEVTYGSYVFSFATTHAGMKeSEAAGLNSIFWGTFAACRGL 169  

                   ggllgglllggrlsdrlgrglarkgeaeaerrrllllgllllalglllla
                   +++++  l                      ++++++l+ +  + + l+l 
    KIAA1919   170 AIFFATCLQ---------------------PGTMIVLSNIGSLTSSLFLV 198  

                   fapslliallllalvllGlgfggvfpalnalasdlappeaqerGtasGly
                   +++ ++ + l++a  ++G++++ +fp+  +++ ++   +    G  ++++
    KIAA1919   199 LFDKNP-ICLWIATSVYGASMATTFPSGVSWIEQYTTIH----GKSAAFF 243  

                   ntagslggalgpllgGllld<-*
                    ++ slg ++ p+++G+l     
    KIAA1919   244 VIGASLGEMAIPAVIGILQG    263  

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