hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-16310745/chunk_1/iprscan-20080502-16310745.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1918
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00458                                                 127.5    1.5e-33   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00458    1/1     387   510 ..     1   135 []   127.5  1.5e-33

Alignments of top-scoring domains:
SM00458: domain 1 of 1, from 387 to 510: score 127.5, E = 1.5e-33
                   *->rgyfliig.gntglCLdvngnsesksdGnpvqlwdChg.ggnQlWkl
                      ++ + +i++++t++CLd +g++e++    +v++++Chg ggnQ++++
    KIAA1918   387    YYSLGEIRnVETNQCLDNMGRKENE----KVGIFNCHGmGGNQVFSY 429  

                   tYnesdgairinsdlCLtvng...tvtlysCdgtdkgndnQkWevnk.dg
                   t    d++ir+ +dlCL+v+  +++v + +C++   + +nQ We++ +  
    KIAA1918   430 T---ADKEIRT-DDLCLDVSRlngPVIMLKCHH---MRGNQLWEYDAeRL 472  

                   tirnpknskkgvdsglcLdvkdgn...kvqlwtcngsdapnQkWife<-*
                   t+r++       +s++cLd     ++    + +c+gs   +Q+W ++   
    KIAA1918   473 TLRHV-------NSNQCLDEPSEEdkmVPTMQDCSGS--RSQQWLLR    510  

//