hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-16292661/chunk_1/iprscan-20080502-16292661.nocrc
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Query sequence: KIAA1917
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00184                                                  28.8    0.00077   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00184    1/1     300   338 ..     1    23 []    28.8  0.00077

Alignments of top-scoring domains:
SM00184: domain 1 of 1, from 300 to 338: score 28.8, E = 0.00077
                   *->CpICle....pvvlpCgH..FCr.Ci.........CPlC<-*
                      C +Cl++ +++ +lpC H   C +C ++ + + ++CP+C   
    KIAA1917   300    CVVCLSdvrdTLILPCRHlcLCNtCAdtlryqannCPIC    338  

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