hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-16274831/chunk_1/iprscan-20080502-16274831.nocrc
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Query sequence: KIAA1916
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00369                                                  76.2      4e-18   3
SM00082                                                  28.8    0.00077   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00369     1/3      81   104 ..     1    24 []    24.8    0.012
SM00369     2/3     105   128 ..     1    24 []    22.6    0.057
SM00369     3/3     129   152 ..     1    24 []    28.9  0.00072
SM00082     1/1     164   213 ..     1    55 []    28.8  0.00077

Alignments of top-scoring domains:
SM00369: domain 1 of 3, from 81 to 104: score 24.8, E = 0.012
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      Lp+L+ L L++N +t + ++aF+g   
    KIAA1916    81    LPSLQLLLLNSNSFTIIRDDAFAG    104  

SM00369: domain 2 of 3, from 105 to 128: score 22.6, E = 0.057
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L +L+ L  ++N+++++ ++aF+g   
    KIAA1916   105    LFHLEYLFIEGNKIETISRNAFRG    128  

SM00369: domain 3 of 3, from 129 to 152: score 28.9, E = 0.00072
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L+ L++L+L nN++++LP+++F++   
    KIAA1916   129    LRDLTHLSLANNHIKALPRDVFSD    152  

SM00082: domain 1 of 1, from 164 to 213: score 28.8, E = 0.00077
                   *->NPfnCDCeLrwLlrwleaqnnealqdpvsslrCasPeslrGqpllll
                      N f+CDC  +wL +wl+  +n+ ++    +++C +P++++ ++l ++
    KIAA1916   164    NKFECDCKAKWLYLWLKM-TNSTVS----DVLCIGPPEYQEKKLNDV 205  

                   lpsefsCp<-*
                   +  + +C+   
    KIAA1916   206 TSFDYECT    213  

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