hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-16042044/chunk_1/iprscan-20080502-16042044.nocrc
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Query sequence: KIAA1902
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00498                                                 427.8   5.8e-124   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00498      1/1     636  1073 ..     1   499 []   427.8 5.8e-124

Alignments of top-scoring domains:
SM00498: domain 1 of 1, from 636 to 1073: score 427.8, E = 5.8e-124
                   *->pkkepkpkkkLKqLhWdklnslrssrqApsNPseisegtvWettvnd
                       kk++k+k +++ ++W +l+           P++i++ tv+      
    KIAA1902   636    IKKPIKTKFRMPVFNWVALK-----------PNQING-TVF-----N 665  

                   kldeekfLynnldldeleelFaakektkkakkrsvsekksklkkkkvqqn
                   ++d+e +  ++l+ de+ee+F  k+k++++   ++s +k+k+ +k  ++ 
    KIAA1902   666 EIDDERI-LEDLNVDEFEEIF--KTKAQGPAI-DLSSSKQKIPQKGSNK- 710  

                   lkilDpkrsqnpplaIllrslhcklsfeetvikeailevDedvlsvdlle
                   +++l ++r++n  laI+lr+     +  e  i+ ai+ +D ++l+vd++e
    KIAA1902   711 VTLLEANRAKN--LAITLRKA--GKTADE--ICKAIHVFDLKTLPVDFVE 754  

                   qLlkfaPYsktkeelkklreykeddekspeeLaraeqiFlllisnLipyl
                   +L++f+P   t+ e+k lr y+++ +k++e+L+++++ F++ +s+ i +l
    KIAA1902   755 CLMRFLP---TENEVKVLRLYERE-RKPLENLSDEDR-FMMQFSK-IERL 798  

                   eeRlnallfkanFeeevedLkpklekveaAceeLreSkkFrklLeliLai
                    +++  ++f+ nF+e +++L p+l +++aA+ ++++S k++k+Le+iLa+
    KIAA1902   799 MQKMTIMAFIGNFAESIQMLTPQLHAIIAASVSIKSSQKLKKILEIILAL 848  

                   GNyMNagsrrrrGqAqGFkLssLlkLsdvKsadnktTLLHflvkiirkky
                   GNyMN +s+r  G+++GFkL+sL+ L+d+Ks+d+k+TLLH++ +++++ky
    KIAA1902   849 GNYMN-SSKR--GAVYGFKLQSLDLLLDTKSTDRKQTLLHYISNVVKEKY 895  

                   pdllkFysdlhhvdkaskvnleqlekdvkqlerqiknlEldkggLsdpeg
                    ++  Fy++lh v+ka++v+le++  dvk+l+r   +++l+k+++  +  
    KIAA1902   896 HQVSLFYNELHYVEKAAAVSLENVLLDVKELQR---GMDLTKREYTMH-- 940  

                   hpddkflevmtpFlkaAkekyekLqkdlrdlktrfeklveyygedpkdrd
                   ++  ++l+    F+     k+ kLq+d++  + +f+++v+y+ge+pk+  
    KIAA1902   941 DH-NTLLKE---FILNNEGKLKKLQDDAKIAQDAFDDVVKYFGENPKT-- 984  

                   vspeeFFkdfneFlkeFkkaaeenlaiEskrkeeEeeerrakqlalrvke
                   ++p  FF +f++F k++k a een    + rk++E+ ++++  ++   + 
    KIAA1902   985 TPPSVFFPVFVRFVKAYKQAEEEN----ELRKKQEQALMEKLLEQ---EA 1027 

                   tteyeqssskqkeneerrvernplmdfeverdflgvldsllkelrtdssf
                   ++e+   +s+  +       +++++++++e+ +++v+d+   ++++d ++
    KIAA1902  1028 LMEQQDPKSPSHKS------KRQQQELIAELRRRQVKDNRHVYEGKDGAI 1071 

                   er<-*
                   e+   
    KIAA1902  1072 ED    1073 

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