# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/pf00972.fasta.nr -Q ../query/KIAA1875.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1875, 922 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7823975 sequences Expectation_n fit: rho(ln(x))= 5.9165+/-0.000196; mu= 11.6588+/- 0.011 mean_var=104.7839+/-19.760, 0's: 37 Z-trim: 45 B-trim: 0 in 0/67 Lambda= 0.125293 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|50978455|emb|CAB70740.2| hypothetical protein [ ( 611) 4235 776.5 0 gi|119602555|gb|EAW82149.1| hCG2040155 [Homo sapie ( 435) 2929 540.3 7.2e-151 gi|114622159|ref|XP_001155567.1| PREDICTED: hypoth ( 435) 2822 520.9 4.8e-145 gi|34530442|dbj|BAC85899.1| unnamed protein produc ( 461) 2510 464.6 4.7e-128 gi|114622161|ref|XP_001155629.1| PREDICTED: hypoth ( 461) 2404 445.4 2.8e-122 gi|15451323|dbj|BAB64465.1| hypothetical protein [ ( 192) 864 166.7 9e-39 gi|194672862|ref|XP_586007.4| PREDICTED: similar t ( 432) 833 161.4 8e-37 gi|210119780|gb|EEA67503.1| hypothetical protein B (1648) 249 56.3 0.00013 gi|210090408|gb|EEA38685.1| hypothetical protein B (1533) 238 54.3 0.00049 >>gi|50978455|emb|CAB70740.2| hypothetical protein [Homo (611 aa) initn: 2923 init1: 2923 opt: 4235 Z-score: 4138.7 bits: 776.5 E(): 0 Smith-Waterman score: 4235; 99.182% identity (99.182% similar) in 611 aa overlap (316-922:1-611) 290 300 310 320 330 340 KIAA18 LEQLRGRTTMALDLPSSHLQCRIPLLPKRWDKEPLSSLRGFFPATVQPHKHCLRPICFPG :::::::::::::::::::::::::::::: gi|509 DKEPLSSLRGFFPATVQPHKHCLRPICFPG 10 20 30 350 360 370 380 390 400 KIAA18 YVPNSAVLQQMWLNAEPGASQDALWLWRPRPSQAQWQRKLLQWMGEKPGEEGEEDKKEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 YVPNSAVLQQMWLNAEPGASQDALWLWRPRPSQAQWQRKLLQWMGEKPGEEGEEDKKEEE 40 50 60 70 80 90 410 420 430 440 450 460 KIAA18 EEKEDEELDWALASLSPHSNQQLDSWELEDQSAVDWTQEPRRRSCKVARTHPHPWHRHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 EEKEDEELDWALASLSPHSNQQLDSWELEDQSAVDWTQEPRRRSCKVARTHPHPWHRHGS 100 110 120 130 140 150 470 480 490 500 510 520 KIAA18 LLLDEHYGHLPKFLHFFIYQTWFKKLFPIFSLQA----YPEAGTIEGLASLLVALLEKTT :::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|509 LLLDEHYGHLPKFLHFFIYQTWFKKLFPIFSLQATLQAYPEAGTIEGLASLLVALLEKTT 160 170 180 190 200 210 530 540 550 560 570 580 KIAA18 WVDRVHILQVLLRLLPNMSSDLQGQLQGLLVHLLNLDQPPSLQDQTQKKFVILALQLLLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 WVDRVHILQVLLRLLPNMSSDLQGQLQGLLVHLLNLDQPPSLQDQTQKKFVILALQLLLA 220 230 240 250 260 270 590 600 610 620 630 640 KIAA18 CSLESRDVVLELMSYFLYSPVHCRPELKKLLHGLGLQDPEGFLFKEMMTWVQGPDLDSKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 CSLESRDVVLELMSYFLYSPVHCRPELKKLLHGLGLQDPEGFLFKEMMTWVQGPDLDSKA 280 290 300 310 320 330 650 660 670 680 690 700 KIAA18 GLRTCCHQKLEDMIQELQETPSQTSVVSGAPTRASVIPSGTSWSASGIFGRLSQVSEVPL ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|509 GLRTCCHQKLEDMIQELQETPPQTSVVSGAPTRASVIPSGTSWSASGIFGRLSQVSEVPL 340 350 360 370 380 390 710 720 730 740 750 760 KIAA18 MVVSPAEPHSLAPELQAQRMLAPTRSWGTPQLRLRVLSETLKSFCLEPEARLHPAGPAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 MVVSPAEPHSLAPELQAQRMLAPTRSWGTPQLRLRVLSETLKSFCLEPEARLHPAGPAQL 400 410 420 430 440 450 770 780 790 800 810 820 KIAA18 PGEPPPLEETDWSHSQLLDLGPIDALNFFCEQLRAQQRSSLQEKAAHPHPPVPYTVAPVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 PGEPPPLEETDWSHSQLLDLGPIDALNFFCEQLRAQQRSSLQEKAAHPHPPVPYTVAPVP 460 470 480 490 500 510 830 840 850 860 870 880 KIAA18 DMVVPPPREHWYHPILRLQEAKPQRSARSAMRLRGPMPSRLCAGRTLDGPIRTLKLPLPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 DMVVPPPREHWYHPILRLQEAKPQRSARSAMRLRGPMPSRLCAGRTLDGPIRTLKLPLPR 520 530 540 550 560 570 890 900 910 920 KIAA18 VEPQPFPLDWPMPPRPLPPRLLQPALQRYFLPADADPDTYS ::::::::::::::::::::::::::::::::::::::::: gi|509 VEPQPFPLDWPMPPRPLPPRLLQPALQRYFLPADADPDTYS 580 590 600 610 >>gi|119602555|gb|EAW82149.1| hCG2040155 [Homo sapiens] (435 aa) initn: 2929 init1: 2929 opt: 2929 Z-score: 2864.9 bits: 540.3 E(): 7.2e-151 Smith-Waterman score: 2929; 99.766% identity (100.000% similar) in 427 aa overlap (496-922:9-435) 470 480 490 500 510 520 KIAA18 LLLDEHYGHLPKFLHFFIYQTWFKKLFPIFSLQAYPEAGTIEGLASLLVALLEKTTWVDR .::::::::::::::::::::::::::::: gi|119 MGAGPQHATLQAYPEAGTIEGLASLLVALLEKTTWVDR 10 20 30 530 540 550 560 570 580 KIAA18 VHILQVLLRLLPNMSSDLQGQLQGLLVHLLNLDQPPSLQDQTQKKFVILALQLLLACSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VHILQVLLRLLPNMSSDLQGQLQGLLVHLLNLDQPPSLQDQTQKKFVILALQLLLACSLE 40 50 60 70 80 90 590 600 610 620 630 640 KIAA18 SRDVVLELMSYFLYSPVHCRPELKKLLHGLGLQDPEGFLFKEMMTWVQGPDLDSKAGLRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SRDVVLELMSYFLYSPVHCRPELKKLLHGLGLQDPEGFLFKEMMTWVQGPDLDSKAGLRT 100 110 120 130 140 150 650 660 670 680 690 700 KIAA18 CCHQKLEDMIQELQETPSQTSVVSGAPTRASVIPSGTSWSASGIFGRLSQVSEVPLMVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 CCHQKLEDMIQELQETPSQTSVVSGAPTRASVIPSGTSWSASGIFGRLSQVSEVPLMVVS 160 170 180 190 200 210 710 720 730 740 750 760 KIAA18 PAEPHSLAPELQAQRMLAPTRSWGTPQLRLRVLSETLKSFCLEPEARLHPAGPAQLPGEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PAEPHSLAPELQAQRMLAPTRSWGTPQLRLRVLSETLKSFCLEPEARLHPAGPAQLPGEP 220 230 240 250 260 270 770 780 790 800 810 820 KIAA18 PPLEETDWSHSQLLDLGPIDALNFFCEQLRAQQRSSLQEKAAHPHPPVPYTVAPVPDMVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PPLEETDWSHSQLLDLGPIDALNFFCEQLRAQQRSSLQEKAAHPHPPVPYTVAPVPDMVV 280 290 300 310 320 330 830 840 850 860 870 880 KIAA18 PPPREHWYHPILRLQEAKPQRSARSAMRLRGPMPSRLCAGRTLDGPIRTLKLPLPRVEPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PPPREHWYHPILRLQEAKPQRSARSAMRLRGPMPSRLCAGRTLDGPIRTLKLPLPRVEPQ 340 350 360 370 380 390 890 900 910 920 KIAA18 PFPLDWPMPPRPLPPRLLQPALQRYFLPADADPDTYS ::::::::::::::::::::::::::::::::::::: gi|119 PFPLDWPMPPRPLPPRLLQPALQRYFLPADADPDTYS 400 410 420 430 >>gi|114622159|ref|XP_001155567.1| PREDICTED: hypothetic (435 aa) initn: 2822 init1: 2822 opt: 2822 Z-score: 2760.3 bits: 520.9 E(): 4.8e-145 Smith-Waterman score: 2822; 96.487% identity (98.126% similar) in 427 aa overlap (496-922:9-435) 470 480 490 500 510 520 KIAA18 LLLDEHYGHLPKFLHFFIYQTWFKKLFPIFSLQAYPEAGTIEGLASLLVALLEKTTWVDR .:::::::::.::::::::::::::::::: gi|114 MGAGPQHATLQAYPEAGTVEGLASLLVALLEKTTWVDR 10 20 30 530 540 550 560 570 580 KIAA18 VHILQVLLRLLPNMSSDLQGQLQGLLVHLLNLDQPPSLQDQTQKKFVILALQLLLACSLE ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|114 VHILQVLLRLLPNMSSDLQGQLQGLLIHLLNLDQPPSLQDQTQKKFVILALQLLLACSLE 40 50 60 70 80 90 590 600 610 620 630 640 KIAA18 SRDVVLELMSYFLYSPVHCRPELKKLLHGLGLQDPEGFLFKEMMTWVQGPDLDSKAGLRT ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|114 SRDVVLELMSYFLYSPVHCRPELKKLLHGLGLRDPEGFLFKEMMTWVQGPDLDSKAGLRT 100 110 120 130 140 150 650 660 670 680 690 700 KIAA18 CCHQKLEDMIQELQETPSQTSVVSGAPTRASVIPSGTSWSASGIFGRLSQVSEVPLMVVS :::::::::::.:::::::::::::::::::::::::::: :.::::::::::::::::: gi|114 CCHQKLEDMIQQLQETPSQTSVVSGAPTRASVIPSGTSWSPSSIFGRLSQVSEVPLMVVS 160 170 180 190 200 210 710 720 730 740 750 760 KIAA18 PAEPHSLAPELQAQRMLAPTRSWGTPQLRLRVLSETLKSFCLEPEARLHPAGPAQLPGEP ::::::::::::::: :::::::::::::: ::::::::::::::::::::::::::::: gi|114 PAEPHSLAPELQAQRTLAPTRSWGTPQLRLGVLSETLKSFCLEPEARLHPAGPAQLPGEP 220 230 240 250 260 270 770 780 790 800 810 820 KIAA18 PPLEETDWSHSQLLDLGPIDALNFFCEQLRAQQRSSLQEKAAHPHPPVPYTVAPVPDMVV ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|114 PPLEETDWSHSQLLDLGPIDALNFFCEQLRAQQRSSLQEKAAHPHPPVPDTVAPVPDMVV 280 290 300 310 320 330 830 840 850 860 870 880 KIAA18 PPPREHWYHPILRLQEAKPQRSARSAMRLRGPMPSRLCAGRTLDGPIRTLKLPLPRVEPQ :::.::: ::::::::::::::::::::::::: ::::::::::: :::::::::::::: gi|114 PPPQEHWCHPILRLQEAKPQRSARSAMRLRGPMLSRLCAGRTLDGRIRTLKLPLPRVEPQ 340 350 360 370 380 390 890 900 910 920 KIAA18 PFPLDWPMPPRPLPPRLLQPALQRYFLPADADPDTYS ::::::: ::::::::::::::::::::::::::::: gi|114 PFPLDWPTPPRPLPPRLLQPALQRYFLPADADPDTYS 400 410 420 430 >>gi|34530442|dbj|BAC85899.1| unnamed protein product [H (461 aa) initn: 2502 init1: 2502 opt: 2510 Z-score: 2455.2 bits: 464.6 E(): 4.7e-128 Smith-Waterman score: 2867; 94.040% identity (94.260% similar) in 453 aa overlap (496-922:9-461) 470 480 490 500 510 520 KIAA18 LLLDEHYGHLPKFLHFFIYQTWFKKLFPIFSLQAYPEAGTIEGLASLLVALLEKTTWVDR .::::::::::::::::::::::::::::: gi|345 MGAGPQHATLQAYPEAGTIEGLASLLVALLEKTTWVDR 10 20 30 530 540 550 560 KIAA18 VHILQVLLRLLPNMSSDLQGQLQGLLVHLLNLDQPPSLQ--------------------- ::::::::::::::::::::::::::::::::::::::: gi|345 VHILQVLLRLLPNMSSDLQGQLQGLLVHLLNLDQPPSLQVCPLSCPQFSSPPTGPQQPHP 40 50 60 70 80 90 570 580 590 600 610 KIAA18 -----DQTQKKFVILALQLLLACSLESRDVVLELMSYFLYSPVHCRPELKKLLHGLGLQD ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 HRLPQDQTQKKFVILALQLLLACSLESRDVVLELMSYFLYSPVHCRPELKKLLHGLGLQD 100 110 120 130 140 150 620 630 640 650 660 670 KIAA18 PEGFLFKEMMTWVQGPDLDSKAGLRTCCHQKLEDMIQELQETPSQTSVVSGAPTRASVIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 PEGFLFKEMMTWVQGPDLDSKAGLRTCCHQKLEDMIQELQETPSQTSVVSGAPTRASVIP 160 170 180 190 200 210 680 690 700 710 720 730 KIAA18 SGTSWSASGIFGRLSQVSEVPLMVVSPAEPHSLAPELQAQRMLAPTRSWGTPQLRLRVLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 SGTSWSASGIFGRLSQVSEVPLMVVSPAEPHSLAPELQAQRMLAPTRSWGTPQLRLRVLS 220 230 240 250 260 270 740 750 760 770 780 790 KIAA18 ETLKSFCLEPEARLHPAGPAQLPGEPPPLEETDWSHSQLLDLGPIDALNFFCEQLRAQQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 ETLKSFCLEPEARLHPAGPAQLPGEPPPLEETDWSHSQLLDLGPIDALNFFCEQLRAQQR 280 290 300 310 320 330 800 810 820 830 840 850 KIAA18 SSLQEKAAHPHPPVPYTVAPVPDMVVPPPREHWYHPILRLQEAKPQRSARSAMRLRGPMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 SSLQEKAAHPHPPVPYTVAPVPDMVVPPPREHWYHPILRLQEAKPQRSARSAMRLRGPMP 340 350 360 370 380 390 860 870 880 890 900 910 KIAA18 SRLCAGRTLDGPIRTLKLPLPRVEPQPFPLDWPMPPRPLPPRLLQPALQRYFLPADADPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 SRLCAGRTLDGPIRTLKLPLPRVEPQPFPLDWPMPPRPLPPRLLQPALQRYFLPADADPD 400 410 420 430 440 450 920 KIAA18 TYS ::: gi|345 TYS 460 >>gi|114622161|ref|XP_001155629.1| PREDICTED: hypothetic (461 aa) initn: 2397 init1: 2397 opt: 2404 Z-score: 2351.6 bits: 445.4 E(): 2.8e-122 Smith-Waterman score: 2760; 90.949% identity (92.494% similar) in 453 aa overlap (496-922:9-461) 470 480 490 500 510 520 KIAA18 LLLDEHYGHLPKFLHFFIYQTWFKKLFPIFSLQAYPEAGTIEGLASLLVALLEKTTWVDR .:::::::::.::::::::::::::::::: gi|114 MGAGPQHATLQAYPEAGTVEGLASLLVALLEKTTWVDR 10 20 30 530 540 550 560 KIAA18 VHILQVLLRLLPNMSSDLQGQLQGLLVHLLNLDQPPSLQ--------------------- ::::::::::::::::::::::::::.:::::::::::: gi|114 VHILQVLLRLLPNMSSDLQGQLQGLLIHLLNLDQPPSLQVCPLSCPQFSSPPTGPQQPHP 40 50 60 70 80 90 570 580 590 600 610 KIAA18 -----DQTQKKFVILALQLLLACSLESRDVVLELMSYFLYSPVHCRPELKKLLHGLGLQD :::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|114 HRLPQDQTQKKFVILALQLLLACSLESRDVVLELMSYFLYSPVHCRPELKKLLHGLGLRD 100 110 120 130 140 150 620 630 640 650 660 670 KIAA18 PEGFLFKEMMTWVQGPDLDSKAGLRTCCHQKLEDMIQELQETPSQTSVVSGAPTRASVIP :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|114 PEGFLFKEMMTWVQGPDLDSKAGLRTCCHQKLEDMIQQLQETPSQTSVVSGAPTRASVIP 160 170 180 190 200 210 680 690 700 710 720 730 KIAA18 SGTSWSASGIFGRLSQVSEVPLMVVSPAEPHSLAPELQAQRMLAPTRSWGTPQLRLRVLS :::::: :.:::::::::::::::::::::::::::::::: :::::::::::::: ::: gi|114 SGTSWSPSSIFGRLSQVSEVPLMVVSPAEPHSLAPELQAQRTLAPTRSWGTPQLRLGVLS 220 230 240 250 260 270 740 750 760 770 780 790 KIAA18 ETLKSFCLEPEARLHPAGPAQLPGEPPPLEETDWSHSQLLDLGPIDALNFFCEQLRAQQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ETLKSFCLEPEARLHPAGPAQLPGEPPPLEETDWSHSQLLDLGPIDALNFFCEQLRAQQR 280 290 300 310 320 330 800 810 820 830 840 850 KIAA18 SSLQEKAAHPHPPVPYTVAPVPDMVVPPPREHWYHPILRLQEAKPQRSARSAMRLRGPMP ::::::::::::::: :::::::::::::.::: ::::::::::::::::::::::::: gi|114 SSLQEKAAHPHPPVPDTVAPVPDMVVPPPQEHWCHPILRLQEAKPQRSARSAMRLRGPML 340 350 360 370 380 390 860 870 880 890 900 910 KIAA18 SRLCAGRTLDGPIRTLKLPLPRVEPQPFPLDWPMPPRPLPPRLLQPALQRYFLPADADPD ::::::::::: ::::::::::::::::::::: :::::::::::::::::::::::::: gi|114 SRLCAGRTLDGRIRTLKLPLPRVEPQPFPLDWPTPPRPLPPRLLQPALQRYFLPADADPD 400 410 420 430 440 450 920 KIAA18 TYS ::: gi|114 TYS 460 >>gi|15451323|dbj|BAB64465.1| hypothetical protein [Maca (192 aa) initn: 681 init1: 681 opt: 864 Z-score: 852.3 bits: 166.7 E(): 9e-39 Smith-Waterman score: 864; 73.714% identity (85.714% similar) in 175 aa overlap (356-522:1-175) 330 340 350 360 370 KIAA18 FFPATVQPHKHCLRPICFPGYVPNSAVLQQMWLNAEPGA----SQDALW--LWRPRPSQA :::::: .. .: : : :::::: gi|154 MWLNAEVSGLGSLTQLASQRKLKYPRPSQA 10 20 30 380 390 400 410 420 430 KIAA18 QWQRKLLQWMGEKPGEEGEEDKKEEEEEKE-DEELDWALASLSPHSNQQLDSWELEDQSA :::::::::.:.::::: :::.:::::..: .:::: : :::: ::.:::::::::.::: gi|154 QWQRKLLQWLGDKPGEEEEEDQKEEEEKEEVEEELDRASASLSSHSSQQLDSWELEEQSA 40 50 60 70 80 90 440 450 460 470 480 490 KIAA18 VDWTQEPRRRSCKVARTHPHPWHRHGSLLLDEHYGHLPKFLHFFIYQTWFKKLFPIFSLQ ::::.:::::. ..::::::::::::::::::::.::::::::::::::::.:::.:.:: gi|154 VDWTREPRRRTYETARTHPHPWHRHGSLLLDEHYAHLPKFLHFFIYQTWFKELFPVFNLQ 100 110 120 130 140 150 500 510 520 530 540 550 KIAA18 AYPEAGTIEGLASLLVAL-LEKTTWVDRVHILQVLLRLLPNMSSDLQGQLQGLLVHLLNL :::::::.::::: .:: : : gi|154 AYPEAGTVEGLASACLALGLAIGIWPRPASGIKSREFQKKKK 160 170 180 190 >>gi|194672862|ref|XP_586007.4| PREDICTED: similar to hC (432 aa) initn: 1332 init1: 783 opt: 833 Z-score: 817.3 bits: 161.4 E(): 8e-37 Smith-Waterman score: 1487; 56.561% identity (73.303% similar) in 442 aa overlap (504-921:2-431) 480 490 500 510 520 530 KIAA18 HLPKFLHFFIYQTWFKKLFPIFSLQAYPEAGTIEGLASLLVALLEKTTWVDRVHILQVLL ::.::::: .. :::...:.::::.:..:: gi|194 MGTVEGLASAFMDLLEEASWADRVHVLRALL 10 20 30 540 550 560 570 580 590 KIAA18 RLLPNMSSDLQGQLQGLLVHLLNLDQPPSLQDQTQKKFVILALQLLLACSLESRDVVLEL ::::..: :. ..::: :.:::::.:::::::..::.::.::::::::::::::.::.:: gi|194 RLLPDLSRDFCSRLQGTLLHLLNLEQPPSLQDRVQKQFVMLALQLLLACSLESREVVVEL 40 50 60 70 80 90 600 610 620 630 640 650 KIAA18 MSYFLYSPVHCRPELKKLLHGLGLQDPEGFLFKEMMTWVQGPDLDSKAGLRTCCHQKLED ::::::::. ::::..:: :::::::.::::::::::::::: .::: :: : ::::. gi|194 MSYFLYSPAPFRPELRRLLDGLGLQDPQGFLFKEMMTWVQGPDPESKATLRRRCCQKLEE 100 110 120 130 140 150 660 670 680 690 KIAA18 MIQELQETPSQTSVVSGAPTRASVI-------PSGTSWSA----SGIFGRLS----QVSE :::.:: .: ::.. . . .: :: . : :: :..: .::. gi|194 MIQQLQMETTQLSVAKMSEVLPKVSETSGLHPPSKEALSQISMLSGAAGHVSVTSSNVSQ 160 170 180 190 200 210 700 710 720 730 740 750 KIAA18 VPLMVVSPAEPHSLAPELQAQRMLAPTRSWGTPQLRL----RVLSETLKSFCLEPEARLH .: .::::. . : :::. : :::.. :.::::: :::.::. :. gi|194 TPSLVVSPGVSDLTTLEPQAQQTL--------PQLHFTRTRRALSETLMHFCLQPEVVLR 220 230 240 250 260 760 770 780 790 800 KIAA18 PAGPAQLPGE-PP----PLEETDWSHSQLLDLGPIDALNFFCEQLRAQQRSSLQEKAAHP ..:: :: : :: :: . ::.:..::::::::::::::: : .... : :. : gi|194 SSAPAILPHEMPPREMLPLAQMVWSQSKMLDLGPIDALNFFCEQQRIRHQGPLPEEPYSP 270 280 290 300 310 320 810 820 830 840 850 860 KIAA18 HPPVPYTVAPVPDMVVPPPREHWYHPILRLQEAKPQRSARSAMRLRGPMPSRLCAGRTLD :: : ::.: . . :::::::. ::: ::::: : ::::. :.:: gi|194 -PPGPPLPPQFCGMVLPHSPDPRHDRILRLQEARVQRSP---MRLRGRMLSRLCVDRSLD 330 340 350 360 370 870 880 890 900 910 920 KIAA18 GPIRTLKLPLPRVEPQPFPLDWPMPPRPLPPRLLQPALQRYFLPADADPDTYS . :: ::::::::: :::: ::: ::::::::.::::::::: :..::.: gi|194 STIRILKLPLPRVELQPFPPDWPRSARPLPPRLLHPALQRYFLPDDTNPDNYH 380 390 400 410 420 430 >>gi|210119780|gb|EEA67503.1| hypothetical protein BRAFL (1648 aa) initn: 226 init1: 179 opt: 249 Z-score: 239.0 bits: 56.3 E(): 0.00013 Smith-Waterman score: 297; 21.363% identity (45.727% similar) in 866 aa overlap (89-912:900-1640) 60 70 80 90 100 110 KIAA18 GGGLAVWGPLELIQACLSPGTPVWGWSLSQPLPQPTGM-PPSIPPVP-VPVCSEALSLIH : : :. ::: : ::. . .:. . gi|210 THDIKVKDPDDFDPDTYFLEPPEPDEDPYMPERGPLGFFPPSTAAVKSVPTTAASLDRDK 870 880 890 900 910 920 120 130 140 150 160 KIAA18 R--RRATSQHLVPK----EDLDAIVARDRDLQQLRLGLVVPAAQPPPSWQQRQEGF--DN . :. :. . .:. ::.. . . .. .. .:: .. :: .. gi|210 KMSREPTGIQSLPEGPTEEDVEEVKEEKKEGEE-------EEEKPPMTYVINPSGFIPNS 930 940 950 960 970 980 170 180 190 200 210 220 KIAA18 YL-RLIYGSGLLGMQSGRGSQQWSAGTLRVERETRDVCAVPQAAHCLARAEVSTAAQTVP : ::.. . . :. .....:. :: .:. .. . : : . . .:..: gi|210 ILVRLLWPAEEMEKQK-KAQEEWKPPTLTAEQLAQ--IEGSRKEHQLPTSADTELSQSAP 990 1000 1010 1020 1030 230 240 250 260 270 280 KIAA18 TALSPQDLGALGQHFSQSPRVTV----PIPPTHRRVHSKASQLLARSSLSHYLGISLDLQ : .... :. : :. : :: . : :: . ..:. :. gi|210 FNYELAML-VINKFKSRRKRRTLLHQLKAELKTRTDPSKPVDTLPLSSSLKKQNVSVPLS 1040 1050 1060 1070 1080 1090 290 300 310 320 330 KIAA18 LQLEQ------LRGR---TTMALDLPSSHLQCRIPLLP--KRWDKE-PLSSLRGFFPATV :... :. . ::..: : .:. .:: : :. : :::::. : .: gi|210 SQVRKEDTLSVLKKKADATTVSLTSPERKLDTSLPLSPLGKKQDTSLPLSSLK---PESV 1100 1110 1120 1130 1140 1150 340 350 360 370 380 KIAA18 QPHKHCLRPICFPGYVPNSAVLQQMWLNAE----PGASQDALWLWRPRPSQAQWQRKLLQ . . : : . : . : : :. .: :. : :.. gi|210 EEE--------FEDEVKS-------WSDEEEEPTPMLSKLMEKARKP-PTPETEARFLIS 1160 1170 1180 1190 390 400 410 420 430 440 KIAA18 WMGEKPGEEGEEDKKEEEEEKEDEELDWALASLSPHSN-QQLDSWELEDQSAVDWTQEPR . : : . : . ..: ..:.. ..: . : . . : gi|210 QVKPTP-EPSPEPPPPPKPKRE----------IKPRQPIKKLVTRPLTPPKPPTPSPPP- 1200 1210 1220 1230 1240 450 460 470 480 490 500 KIAA18 RRSCKVARTHPHPWHRHGSLLLDEHYGHLPKFLHFFIYQTWFKKLFPIFSLQAYPEAGTI :: : : . :: :. : :.:..: . .. . :. gi|210 --PPKVPTPPPPSPPRPPT--------PLPDFISQFDGTDWYKQFFS--DPKSISKPWTM 1250 1260 1270 1280 1290 510 520 530 540 550 560 KIAA18 EGLASLLVALLEKTTWVDRVHILQVLLRLLPNMSSDLQGQLQGLLVHLLNLDQPPSLQDQ .. . :. .:. . : .. ::... : . . ... ... .:. :...: gi|210 QSYLNNLLRVLKIADWPHKAGILDAITLLHSQENFTNIADIVKVVLDFLGGPPSPNIRDP 1300 1310 1320 1330 1340 1350 570 580 590 600 610 620 KIAA18 TQKKFVILALQLLLACSLESRDVVLELMSYFLYSPVHCRPELKKLLHGLGLQDPEGFLFK .. :: ::.:: : ..:.. :::::. .: . . : ....: .:.:::. .... gi|210 RERPFVESALKLLNALHIQSKEFVLELMALYLENDSELRLLIHRILGDIGMQDPHRYFYR 1360 1370 1380 1390 1400 1410 630 640 650 660 670 680 KIAA18 EMMTWVQGPDLDSKAGLRTCCHQKLEDMIQELQETPSQTSVVSGAPTRASVIPSGTSWSA :: :: . :: : :..: . .: . : .:.. . . gi|210 EMDTW-------TVAGES---HAMLKNMAEGWLDTWTGKFKVH---LQATI----DQLRS 1420 1430 1440 1450 690 700 710 720 730 740 KIAA18 SGIFGRLSQVSEVPLMVVSPAEPHSLAPELQAQRMLAPTRSWGTPQLRLRVLSETLKSFC .:. : :. :..: ... .: : . . :. :: : .. gi|210 GGVQG----------MTRLPTRPGR-----KGKGILKKTPDESEPRRRLSVTIDA----- 1460 1470 1480 1490 750 760 770 780 790 800 KIAA18 LEPEARLHPAGPAQLPGEPPPLEETDWSHSQLLDLGPIDALNFFCEQLRAQQRSSL---Q :: ... :.: ::.:.:.::: .: .. . . : gi|210 ------------------PP--DQSAIEHAQ-----PIEAVNYFCELVREEELARMRKGQ 1500 1510 1520 1530 810 820 830 840 850 KIAA18 EKAAHPHPP-VPYTVAPVPDMVVPPPREHWYHPILRLQEAKPQRSARSAMRLRG----PM ::. :.: . :: .: . : . .::: :.. .. : : : . gi|210 EKVPTPQPEGAKNTVLVLPHI---PSK----GSLLRLGETHTSKCHRH--RETGLADVTL 1540 1550 1560 1570 1580 860 870 880 890 900 910 KIAA18 PSRLCAGRTLDGPIRTLKLPLPRVEPQPFP--LDWPMPPRPLPPRLLQPALQRYFLPADA : : ..: :..: .. .::: :: . : . .::. gi|210 PPILPKRNLVEGFTPFLSFPTKKITMNPFPSPADWYYEELQQPILITLKMAPKYFVHELS 1590 1600 1610 1620 1630 1640 920 KIAA18 DPDTYS gi|210 YLHE >>gi|210090408|gb|EEA38685.1| hypothetical protein BRAFL (1533 aa) initn: 275 init1: 179 opt: 238 Z-score: 228.7 bits: 54.3 E(): 0.00049 Smith-Waterman score: 245; 21.003% identity (49.060% similar) in 638 aa overlap (89-692:821-1402) 60 70 80 90 100 110 KIAA18 GGGLAVWGPLELIQACLSPGTPVWGWSLSQPLPQPTGM-PPSIPPVP-VPVCSEALSLIH : : :. ::: : ::. . .:. . gi|210 THDIKVKDPDDFDPDTYFLEPPEPDEDPYMPERGPLGFFPPSTAAVKSVPTTAASLDRDK 800 810 820 830 840 850 120 130 140 150 160 KIAA18 R--RRATSQHLVPK----EDLDAIVARDRDLQQLRLGLVVPAAQPPPSWQQRQEGF--DN . :. :. . .:. ::.. . . .. .. .:: .. :: .. gi|210 KMSREPTGIQSLPEGPTEEDVEEVKEEKKEEEE-------EEEKPPMTYVINPSGFIPNS 860 870 880 890 900 170 180 190 200 210 220 KIAA18 YL-RLIYGSGLLGMQSGRGSQQWSAGTLRVERETRDVCAVPQAAHCLARAEVSTAAQTVP : ::.. . . :. .....:. :: .:. .. . : : . . .:..: gi|210 ILVRLLWPAEEMEKQK-KAQEEWKPPTLTAEQLAQ--IEGSRKEHQLPSSADAELSQSTP 910 920 930 940 950 960 230 240 250 260 270 280 KIAA18 TALSPQDLGALGQHFSQSPRVTVPIPPTHRRVHSKASQLLARSSLSHYL---GISLDLQL : . . .. :. . :. .... :. . . :: : ..:. :. gi|210 FNYELALLVVNKFKSRRKRRALLHQLKTELKTRTDPSKPVDKLPLSSSLKKQNFSVPLSP 970 980 990 1000 1010 1020 290 300 310 320 330 KIAA18 QLEQ------LRGR---TTMALDLPSSHLQCRIPLLP--KRWDKE-PLSSLRGFFPATVQ :... :. . ::. : : .:. .:: : :. : . :::::. : .:. gi|210 QVRKEDTLSVLKKKADYTTVPLRSPERQLDTSLPLSPLGKKQDTNLPLSSLK---PESVE 1030 1040 1050 1060 1070 340 350 360 370 380 390 KIAA18 PHKHCLRPICFPGYVPNSAVLQQMWLNAE--PGASQDALWLWRPRPSQAQWQRKLLQWMG . : : . : . : : . : .: . . ..: .. gi|210 DE--------FEDEVKS-------WSDEEEEPTPMLSKLMEKARKPPTPETEARFLISQA 1080 1090 1100 1110 1120 400 410 420 430 440 KIAA18 EKPGEEGEEDKKEEEEEKEDEELDWALASLSPHSN-QQLDSWELEDQSAVDWTQEPRRRS . : . : . ..: ..:.. ..: . : . . : gi|210 KPTPEPSPEPPPPPKPKRE----------IKPRQPIKKLVTRPLTPPKPPTPSPPP---P 1130 1140 1150 1160 450 460 470 480 490 500 KIAA18 CKVARTHPHPWHRHGSLLLDEHYGHLPKFLHFFIYQTWFKKLFPIFSLQAYPEAGTIEGL :: : : . :: :. : :.:..: . .. . :... gi|210 PKVPTPPPPSPPRPLT--------PLPDFISQFDGTDWYKQFFS--DPKSISKPWTMQSY 1170 1180 1190 1200 1210 510 520 530 540 550 560 KIAA18 ASLLVALLEKTTWVDRVHILQVLLRLLPNMSSDLQGQLQGLLVHLLNLDQPPSLQDQTQK . :. .:. . : .. ::... : . . ... ... .:. :...: .. gi|210 LNNLLRVLKIADWPHKAGILDAITLLHSQENFTNIADIVKVVLDFLGGPPAPNIRDPRER 1220 1230 1240 1250 1260 1270 570 580 590 600 610 620 KIAA18 KFVILALQLLLACSLESRDVVLELMSYFLYSPVHCRPELKKLLHGLGLQDPEGFLFKEMM :: ::.:: : ..:.. :::::. .: . . : ....: .:.:::. ....:: gi|210 PFVESALKLLNALRIQSKEFVLELMALYLENDSELRLLIHRILGDIGMQDPHRYFYREMD 1280 1290 1300 1310 1320 1330 630 640 650 660 670 680 KIAA18 TW-VQGPDLDSKAGLRTCCHQKLEDMIQE----LQETPSQTSVVSGAPTRASVIPSGTSW :: :.: .:.: :.. . :. . :: : .: ::. . .:. . gi|210 TWTVSG---ESHAMLKNMAEGWLDTWTGKFKVHLQATIDQLR--SGGVQGMTRLPTRPGR 1340 1350 1360 1370 1380 1390 690 700 710 720 730 740 KIAA18 SASGIFGRLSQVSEVPLMVVSPAEPHSLAPELQAQRMLAPTRSWGTPQLRLRVLSETLKS ...::. . gi|210 KGKGILKKTPVCVICHRANLWWSVLKVPTPQPEGAKNTVLVLPHIPSKGSLLRLGETHTS 1400 1410 1420 1430 1440 1450 922 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Fri Mar 6 00:23:24 2009 done: Fri Mar 6 00:27:02 2009 Total Scan time: 1665.330 Total Display time: 0.300 Function used was FASTA [version 34.26.5 April 26, 2007]